NO12G00140, NO12G00140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G00140 vs. NCBI_GenBank
Match: EWM26010.1 (Autophagy-related protein 1010 family protein [Nannochloropsis gaditana]) HSP 1 Score: 265.0 bits (676), Expect = 2.000e-67 Identity = 132/192 (68.75%), Postives = 154/192 (80.21%), Query Frame = 0 Query: 1 MNHKEHTLGELELRPLHAKEALQCMLHSILFLRAPNVVRPREVHCKHLRLSYAKLERPXXXXXXXXXXXXXXXARVDEVVDSAIDACLRNLTPAGPKLNKGRLILTFYERRRTQSFFRLIQNEERVVFEEWVIPFLIDNIGTTSPISSSLSHSDEGFVGVDAGDFFSPPRPPSSSSTLTPASSCDGREEDAA 193 MNHKEH LGELELRPLH KEALQC+LHSI+FLRAPN+VRPREVHC+HLRLSY K+ERP AR+DEVVDSA+DACLRNLTPAGP L++G L+LTFYERR+T SFFRLIQNEERVVFEEW+IPFL+D++G+TS ++SSLS SD+GFVGV G+ ++ P SS STL PAS G ED A Sbjct: 1 MNHKEHVLGELELRPLHTKEALQCLLHSIIFLRAPNIVRPREVHCRHLRLSYPKVERP---TSSSSSSSPFSVARIDEVVDSALDACLRNLTPAGPNLSRGHLVLTFYERRQTLSFFRLIQNEERVVFEEWIIPFLVDSMGSTSTLASSLSASDDGFVGVHDGELYTEPSSHSSMSTLPPASLYGGGGEDPA 189
BLAST of NO12G00140 vs. NCBI_GenBank
Match: EWM26011.1 (Autophagy-related protein 1010 family protein [Nannochloropsis gaditana]) HSP 1 Score: 265.0 bits (676), Expect = 2.000e-67 Identity = 132/192 (68.75%), Postives = 154/192 (80.21%), Query Frame = 0 Query: 1 MNHKEHTLGELELRPLHAKEALQCMLHSILFLRAPNVVRPREVHCKHLRLSYAKLERPXXXXXXXXXXXXXXXARVDEVVDSAIDACLRNLTPAGPKLNKGRLILTFYERRRTQSFFRLIQNEERVVFEEWVIPFLIDNIGTTSPISSSLSHSDEGFVGVDAGDFFSPPRPPSSSSTLTPASSCDGREEDAA 193 MNHKEH LGELELRPLH KEALQC+LHSI+FLRAPN+VRPREVHC+HLRLSY K+ERP AR+DEVVDSA+DACLRNLTPAGP L++G L+LTFYERR+T SFFRLIQNEERVVFEEW+IPFL+D++G+TS ++SSLS SD+GFVGV G+ ++ P SS STL PAS G ED A Sbjct: 1 MNHKEHVLGELELRPLHTKEALQCLLHSIIFLRAPNIVRPREVHCRHLRLSYPKVERP---TSSSSSSSPFSVARIDEVVDSALDACLRNLTPAGPNLSRGHLVLTFYERRQTLSFFRLIQNEERVVFEEWIIPFLVDSMGSTSTLASSLSASDDGFVGVHDGELYTEPSSHSSMSTLPPASLYGGGGEDPA 189
BLAST of NO12G00140 vs. NCBI_GenBank
Match: GAX26074.1 (hypothetical protein FisN_4Hh422 [Fistulifera solaris]) HSP 1 Score: 118.6 bits (296), Expect = 2.300e-23 Identity = 64/151 (42.38%), Postives = 92/151 (60.93%), Query Frame = 0 Query: 1 MNHKEHTLGELELRPLHAKEALQCMLHSILFLRAPNVVRPREVHCKHLRLSYAKLERPXXXXXXXXXXXXXXXA---RVDEVVDSAIDACLRNLTPAGPKLNKGRLILTFYERRRTQSFFRLIQNEERVVFEEWVIPFLIDNIGTTSPISS 149 MN KEH L ELEL + ALQC+LH+ILFLR+P V P++V C+ L+YA++ + +D+ VD AI++ LR L+ GP+L G L ++F+ERR T+ F L+ +EERVVFE+WVI +++N T PIS+ Sbjct: 1 MNCKEHYLPELELSTAQVRSALQCILHTILFLRSPGPVTPKDVECEDFNLTYARIANNHQNQPPNKAMGNIVHSLENDIDQKVDDAIESFLRTLSQIGPELLSGCLTVSFFERRATRQLFGLVSHEERVVFEQWVIRLVVNN--TPRPISN 149
BLAST of NO12G00140 vs. NCBI_GenBank
Match: GAX24308.1 (hypothetical protein FisN_4Lh422 [Fistulifera solaris]) HSP 1 Score: 117.1 bits (292), Expect = 6.700e-23 Identity = 63/151 (41.72%), Postives = 92/151 (60.93%), Query Frame = 0 Query: 1 MNHKEHTLGELELRPLHAKEALQCMLHSILFLRAPNVVRPREVHCKHLRLSYAKLERPXXXXXXXXXXXXXXXA---RVDEVVDSAIDACLRNLTPAGPKLNKGRLILTFYERRRTQSFFRLIQNEERVVFEEWVIPFLIDNIGTTSPISS 149 MN KEH L ELEL + ALQC+LH+ILFLR+P V P++V C+ L+YA++ + +D+ VD AI++ LR L+ GP+L G L ++F+ERR T+ F L+ +EERVVFE+WV+ +++N T PIS+ Sbjct: 1 MNCKEHYLPELELSTAQVRSALQCILHTILFLRSPGPVTPKDVECEDFNLTYARIANNHQNQPPNKAMGNIVHSLENDIDQKVDDAIESFLRTLSQIGPELLSGCLTVSFFERRATRQLFGLVSHEERVVFEQWVMRVVVNN--TPRPISN 149
BLAST of NO12G00140 vs. NCBI_GenBank
Match: CBN79615.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 113.6 bits (283), Expect = 7.500e-22 Identity = 63/145 (43.45%), Postives = 89/145 (61.38%), Query Frame = 0 Query: 1 MNHKEHTLGELELRPLHAKEALQCMLHSILFLRAPNVVRPREVHCKHLRLSYAKLERPXXXXXXXXXXXXXXXARVDEVVDSAIDACLRNLTPAGPKLNKGRLILTFYERRRTQSFFRLIQNEERVVFEEWVIPFLIDNIGTTSP 146 MN KEH L ELEL + ++ALQC+LH+ILF+RAP +RPRE HC++ LS+A+ VD VD A++ R+L PAGP L+KG + ++F+ RR +S F L EE+VV+E+WV+P L++ TSP Sbjct: 1 MNLKEHVLEELELHEYYVRDALQCLLHTILFVRAPGSLRPRESHCENFGLSFAR----------------CGARDVDVAVDGALEDFWRSLRPAGPDLSKGWIAVSFFMRREKKS-FGLFLKEEKVVWEQWVVPVLVN----TSP 124
BLAST of NO12G00140 vs. NCBI_GenBank
Match: OEU13269.1 (hypothetical protein FRACYDRAFT_275992 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 100.9 bits (250), Expect = 5.000e-18 Identity = 60/148 (40.54%), Postives = 86/148 (58.11%), Query Frame = 0 Query: 1 MNHKEHTLGELELRPLHAKEALQCMLHSILFLRAPNVVRPREVHCKHLR-LSYAKLERPXXXXXXXXXXXXXXXARVDEVVDSAIDACLRNLTPAGPKLNKGRLILTFYERRRTQSFFRLIQNEERVVFEEWVIPFLIDNIGTTSPIS 148 MN KEH L ELEL +EALQ +L++ILF+R+P V PR+V C+ L+Y ++ VD+ VD +I L L+ GP+L G L L+F+ERR+TQ F L+ NEERVV+E+W + +++N T P+S Sbjct: 1 MNCKEHYLPELELATGQVREALQAILYTILFIRSPGPVSPRDVECEGFDFLTYPRIATSSSLSTLNYD--------VDKRVDQSIQNFLMKLSQIGPELLSGGLTLSFFERRKTQQLFGLVSNEERVVWEQWHLRVVVNN--TPRPVS 138
BLAST of NO12G00140 vs. NCBI_GenBank
Match: XP_002287468.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94911.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 94.0 bits (232), Expect = 6.100e-16 Identity = 50/147 (34.01%), Postives = 78/147 (53.06%), Query Frame = 0 Query: 1 MNHKEHTLGELELRPLHAKEALQCMLHSILFLRAPNVVRPREVHCKHLRLSYAKLERPXXXXXXXXXXXXXXXAR--------VDEVVDSAIDACLRNLTPAGPKLNKGRLILTFYERRRTQSFFRLIQNEERVVFEEWVIPFLIDN 140 MN + H L E E H +EALQ +LH+ILF+R+P V P +V C+ +Y ++ + +D VD +I+ L+ L+P GP+L G L L+F+ERR F L+ EE+VV+E+WV+ +++N Sbjct: 1 MNCQVHQLPEFESATSHVREALQAILHTILFIRSPGQVAPYDVQCESFDTTYTRIATDNDPPPTLHQSRQHHNQQPTNLLKSDLDRKVDDSIETFLQTLSPIGPELMAGCLTLSFFERRAKNKLFGLVHQEEKVVWEQWVLRVVVNN 147
BLAST of NO12G00140 vs. NCBI_GenBank
Match: EJK58226.1 (hypothetical protein THAOC_21671 [Thalassiosira oceanica]) HSP 1 Score: 93.2 bits (230), Expect = 1.000e-15 Identity = 50/147 (34.01%), Postives = 78/147 (53.06%), Query Frame = 0 Query: 1 MNHKEHTLGELELRPLHAKEALQCMLHSILFLRAPNVVRPREVHCKHLRLSYAKLERP--------XXXXXXXXXXXXXXXARVDEVVDSAIDACLRNLTPAGPKLNKGRLILTFYERRRTQSFFRLIQNEERVVFEEWVIPFLIDN 140 MN H L ELE L +EAL ++H++LF+R+P V P +VHC+ L+Y ++ ++D VD +I+ L+ LTP GP+L G L ++F+ERR + F L EE+V FE+W++ L++N Sbjct: 1 MNCHIHQLPELETATLAVREALAAVIHTVLFIRSPGPVSPFDVHCESFGLTYTRIATENDPLHGIVTGGASRRQNKSTSSYQQLDRKVDGSIEEFLQTLTPIGPELMAGNLAISFFERRPKKQLFGLHITEEKVPFEQWIVRVLVNN 147
BLAST of NO12G00140 vs. NCBI_GenBank
Match: XP_008878378.1 (hypothetical protein H310_12896 [Aphanomyces invadans] >ETV93113.1 hypothetical protein H310_12896 [Aphanomyces invadans]) HSP 1 Score: 76.3 bits (186), Expect = 1.300e-10 Identity = 47/135 (34.81%), Postives = 68/135 (50.37%), Query Frame = 0 Query: 5 EHTLGELELRPLHAKEALQCMLHSILFLRAPNVVRPREVHCKHLRLSYAKLERPXXXXXXXXXXXXXXXARVDEVVDSAIDACLRNLT--PAGPKLNKGRLILTFYERRRTQSFFRLIQNEERVVFEEWVIPFLI 138 EH L EL + E + C+LH+ILF RAP VRP E HC+ ++YA A V VD+AI R++T AG R+ + F+E R ++ F +QNEE+VV+E+W +P + Sbjct: 20 EHELEELRVGVSELAECVACLLHTILFTRAPGPVRPAEAHCRFRPITYA----------------YCPVAEVTRKVDAAIAQFQRHMTRHHAG---RGHRITVVFFETRVNKALFGFVQNEEKVVWEKWTLPIRV 135
BLAST of NO12G00140 vs. NCBI_GenBank
Match: XP_009837116.1 (hypothetical protein H257_11788 [Aphanomyces astaci] >ETV73241.1 hypothetical protein H257_11788 [Aphanomyces astaci]) HSP 1 Score: 75.1 bits (183), Expect = 2.900e-10 Identity = 46/135 (34.07%), Postives = 69/135 (51.11%), Query Frame = 0 Query: 6 HTLGELELRPLHAKEALQCMLHSILFLRAPNVVRPREVHCKHLRLSYAKLERPXXXXXXXXXXXXXXXARVDEVVDSAIDACLRNLTPAGPKLNKG---RLILTFYERRRTQSFFRLIQNEERVVFEEWVIPFLI 138 H L EL + E + C+LH+ILF RAP VRP E HC+ ++YA A V VD+AI R++T + + G R+ + F+E R ++ F L+QNEE+VV+E+W +P + Sbjct: 18 HELEELRVGVSELAECVACLLHTILFTRAPGPVRPAEAHCRFRPITYA----------------YCPVAEVTRKVDAAIVQFQRHMT----RHHSGGGHRITVMFFETRVNKALFGLVQNEEKVVWEKWTLPIRV 132 The following BLAST results are available for this feature:
BLAST of NO12G00140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G00140 ID=NO12G00140|Name=NO12G00140|organism=Nannochloropsis oceanica|type=gene|length=3921bpback to top protein sequence of NO12G00140.3 >NO12G00140.3-protein ID=NO12G00140.3-protein|Name=NO12G00140.3|organism=Nannochloropsis oceanica|type=polypeptide|length=213bpback to top protein sequence of NO12G00140.2 >NO12G00140.2-protein ID=NO12G00140.2-protein|Name=NO12G00140.2|organism=Nannochloropsis oceanica|type=polypeptide|length=214bpback to top protein sequence of NO12G00140.1 >NO12G00140.1-protein ID=NO12G00140.1-protein|Name=NO12G00140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=265bpback to top Synonyms
Publications
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