NO11G03310, NO11G03310 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO11G03310 vs. NCBI_GenBank
Match: CBN78837.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 89.4 bits (220), Expect = 9.000e-14 Identity = 49/129 (37.98%), Postives = 72/129 (55.81%), Query Frame = 0 Query: 849 WSLEEEPHPLPPFGLDSPVVAHLLDAWTHDETKLEYLRTWLRHLVHDKLASLPPGYTPGVQLLGLRPETKDGFVVLLLPILRHARPELNILVQSRGSP---SHPGG----------------YDLRIKI 959 W E HP P +GL+SPV+ +LL W+ D KL+YL WLR ++ + +P + G+QL+GL PE KDGF+ L++P++R + +LV SR SP S P G +DLR+K+ Sbjct: 722 WVEETVEHPPPDYGLESPVIRYLLQQWSTDPDKLKYLSLWLRCVIERR--KVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRFT-GGIPVLVHSRRSPPEESIPAGAGTPTSPDSHSKETALWDLRVKV 847
BLAST of NO11G03310 vs. NCBI_GenBank
Match: XP_008889701.1 (hypothetical protein PPTG_00089 [Phytophthora parasitica INRA-310] >ETI57588.1 hypothetical protein F443_00109 [Phytophthora parasitica P1569] >ETK97323.1 hypothetical protein L915_00106 [Phytophthora parasitica] >ETL50698.1 hypothetical protein L916_00099 [Phytophthora parasitica] >ETN23494.1 hypothetical protein PPTG_00089 [Phytophthora parasitica INRA-310] >ETP27361.1 hypothetical protein F441_00110 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 82.4 bits (202), Expect = 1.100e-11 Identity = 44/95 (46.32%), Postives = 58/95 (61.05%), Query Frame = 0 Query: 849 WSLEEEPHPLPPFGLDSPVVAHLLDAWTHDETKLEYLRTWLRHLVHDKLASLPPGYTPGVQLLGLRPETKDGFVVLLLPILRHARPELNILVQSR 944 W E HP P F L+SP VA++L AWT++ K+ YLR WL +V K LP + GV+L L PE +DGF+ L+LP+LR + E IL SR Sbjct: 266 WHEELVRHPTPHFDLESPEVAYILRAWTNNIKKMRYLRRWLIQVVKTK-GPLPEDFPMGVELPRLPPEVRDGFLTLVLPLLRQ-QTEREILAHSR 358
BLAST of NO11G03310 vs. NCBI_GenBank
Match: ETM03718.1 (hypothetical protein L917_00091 [Phytophthora parasitica] >ETP55311.1 hypothetical protein F442_00097 [Phytophthora parasitica P10297]) HSP 1 Score: 82.4 bits (202), Expect = 1.100e-11 Identity = 44/95 (46.32%), Postives = 58/95 (61.05%), Query Frame = 0 Query: 849 WSLEEEPHPLPPFGLDSPVVAHLLDAWTHDETKLEYLRTWLRHLVHDKLASLPPGYTPGVQLLGLRPETKDGFVVLLLPILRHARPELNILVQSR 944 W E HP P F L+SP VA++L AWT++ K+ YLR WL +V K LP + GV+L L PE +DGF+ L+LP+LR + E IL SR Sbjct: 266 WHEELVRHPTPHFDLESPEVAYILRAWTNNIKKMRYLRRWLIQVVKTK-GPLPEDFPMGVELPRLPPEVRDGFLTLVLPLLRQ-QTEREILAHSR 358
BLAST of NO11G03310 vs. NCBI_GenBank
Match: ETM57016.1 (hypothetical protein L914_00099 [Phytophthora parasitica] >ETO86330.1 hypothetical protein F444_00105 [Phytophthora parasitica P1976]) HSP 1 Score: 82.4 bits (202), Expect = 1.100e-11 Identity = 44/95 (46.32%), Postives = 58/95 (61.05%), Query Frame = 0 Query: 849 WSLEEEPHPLPPFGLDSPVVAHLLDAWTHDETKLEYLRTWLRHLVHDKLASLPPGYTPGVQLLGLRPETKDGFVVLLLPILRHARPELNILVQSR 944 W E HP P F L+SP VA++L AWT++ K+ YLR WL +V K LP + GV+L L PE +DGF+ L+LP+LR + E IL SR Sbjct: 266 WHEELVRHPTPHFDLESPEVAYILRAWTNNIKKMRYLRRWLIQVVKTK-GPLPEDFPMGVELPRLPPEVRDGFLTLVLPLLRQ-QTEREILAHSR 358
BLAST of NO11G03310 vs. NCBI_GenBank
Match: CCI44622.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 82.4 bits (202), Expect = 1.100e-11 Identity = 49/132 (37.12%), Postives = 70/132 (53.03%), Query Frame = 0 Query: 849 WSLEEEPHPLPPFGLDSPVVAHLLDAWTHDETKLEYLRTWLRHLVHDK------------------LASLPPG--YTPGVQLLGLRPETKDGFVVLLLPILRHARPELNILVQSRGSPSHPG-GYDLRIKIL 960 W+ E HP P F LDSP V ++L WT + KL+YLR WL H+V+DK L + PG + G++L L PE KDGF+ L++P+L R +LN +Q + G +DLRI+ + Sbjct: 231 WTEEWIRHPTPAFDLDSPEVQYVLFTWTSNTRKLQYLRLWLAHVVNDKVDRKVLGKLSLEQLETASLEMVEPGSHFPMGIELPRLSPEVKDGFLTLIVPLL---RKQLNRTIQVHSRRYNDGIHFDLRIRTI 359
BLAST of NO11G03310 vs. NCBI_GenBank
Match: KUF95736.1 (hypothetical protein AM588_10010542 [Phytophthora nicotianae] >KUF96851.1 hypothetical protein AM587_10010056 [Phytophthora nicotianae]) HSP 1 Score: 82.4 bits (202), Expect = 1.100e-11 Identity = 44/95 (46.32%), Postives = 58/95 (61.05%), Query Frame = 0 Query: 849 WSLEEEPHPLPPFGLDSPVVAHLLDAWTHDETKLEYLRTWLRHLVHDKLASLPPGYTPGVQLLGLRPETKDGFVVLLLPILRHARPELNILVQSR 944 W E HP P F L+SP VA++L AWT++ K+ YLR WL +V K LP + GV+L L PE +DGF+ L+LP+LR + E IL SR Sbjct: 266 WHEELVRHPTPHFDLESPEVAYILRAWTNNIKKMRYLRRWLIQVVKTK-GPLPEDFPMGVELPRLPPEVRDGFLTLVLPLLRQ-QTEREILAHSR 358
BLAST of NO11G03310 vs. NCBI_GenBank
Match: CCA18696.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 81.6 bits (200), Expect = 1.900e-11 Identity = 50/132 (37.88%), Postives = 70/132 (53.03%), Query Frame = 0 Query: 849 WSLEEEPHPLPPFGLDSPVVAHLLDAWTHDETKLEYLRTWLRHLVHDK------------------LASLPPG--YTPGVQLLGLRPETKDGFVVLLLPILRHARPELNILVQSRGSPSHPG-GYDLRIKIL 960 W+ E HP P F LDSP V +LL WT + KL+Y+R WL H+V+DK L + PG + GV+L L PE KDGF+ L++P+L R +L+ +Q + G +DLRI+ L Sbjct: 242 WTEEWIRHPTPAFDLDSPEVQYLLYTWTSNVRKLQYIRLWLAHVVNDKVDRKKLGKISLKQLETASLEMIEPGSHFPIGVELPRLAPEVKDGFLTLIVPLL---RKQLDRSIQVHSRKYNDGVHFDLRIRTL 370
BLAST of NO11G03310 vs. NCBI_GenBank
Match: XP_009532966.1 (hypothetical protein PHYSODRAFT_563377 [Phytophthora sojae] >EGZ12633.1 hypothetical protein PHYSODRAFT_563377 [Phytophthora sojae]) HSP 1 Score: 80.9 bits (198), Expect = 3.200e-11 Identity = 43/95 (45.26%), Postives = 57/95 (60.00%), Query Frame = 0 Query: 849 WSLEEEPHPLPPFGLDSPVVAHLLDAWTHDETKLEYLRTWLRHLVHDKLASLPPGYTPGVQLLGLRPETKDGFVVLLLPILRHARPELNILVQSR 944 W E HP P F L+SP VA++L AWT + K+ YLR WL +V K LP + GV+L L PE +DGF+ L+LP+LR + + IL SR Sbjct: 252 WKEELVRHPTPHFDLESPEVAYILRAWTKNIKKMRYLRRWLIQVVSTK-GPLPEDFPMGVELPRLPPEVRDGFLTLILPLLR-KQTQREILAHSR 344
BLAST of NO11G03310 vs. NCBI_GenBank
Match: GAY06392.1 (Hypothetical protein PINS_014197 [Pythium insidiosum]) HSP 1 Score: 80.1 bits (196), Expect = 5.400e-11 Identity = 42/110 (38.18%), Postives = 62/110 (56.36%), Query Frame = 0 Query: 849 WSLEEEPHPLPPFGLDSPVVAHLLDAWTHDETKLEYLRTWLRHLVHDKLASLPPGYTPGVQLLGLRPETKDGFVVLLLPILR-HARPELNILVQSRGSPSHPGGYDLRIK 958 W E HP PPF LDSP V + L +WT + K++YLR+WL + SLP + G++L L PE +DGF+ L++P+LR E+++ + H DLRI+ Sbjct: 263 WREELVRHPTPPFDLDSPEVQYXLFSWTPNLRKVQYLRSWLTQVAVSSNPSLPAEFPMGIELPRLPPEIRDGFLTLVVPLLRQQIHREIHVHTRQYHDQFHT---DLRIR 369
BLAST of NO11G03310 vs. NCBI_GenBank
Match: OWZ13499.1 (RxLR effector protein [Phytophthora megakarya]) HSP 1 Score: 79.7 bits (195), Expect = 7.100e-11 Identity = 43/95 (45.26%), Postives = 56/95 (58.95%), Query Frame = 0 Query: 849 WSLEEEPHPLPPFGLDSPVVAHLLDAWTHDETKLEYLRTWLRHLVHDKLASLPPGYTPGVQLLGLRPETKDGFVVLLLPILRHARPELNILVQSR 944 W E HP P F + SP VA++L AWT + K+ YLR WL +V K LP + GV+L L PE +DGF+ L+LP+LR + E IL SR Sbjct: 255 WQEELVRHPTPHFDMQSPEVAYILRAWTKNIKKMRYLRRWLIQVVTTK-GPLPDDFPMGVELPRLPPEVRDGFLTLVLPLLR-KQTEREILAHSR 347 The following BLAST results are available for this feature:
BLAST of NO11G03310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 14
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G03310 ID=NO11G03310|Name=NO11G03310|organism=Nannochloropsis oceanica|type=gene|length=5575bpback to top protein sequence of NO11G03310.1 >NO11G03310.1-protein ID=NO11G03310.1-protein|Name=NO11G03310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1268bpback to top Synonyms
Publications
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