jgi.p|Nanoce1779_2|639743, gene_5246 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|639743
Unique Namegene_5246
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_12:828208..835159 -

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Properties
Property NameValue
TranscriptId639829
ProteinId639743
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_12supercontigscaffold_12:828208..835159 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL010ncniL010Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G03310NO11G03310Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|639743mRNA_5246-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|639743mRNA_5246Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|639743

>mRNA_5246-protein ID=mRNA_5246-protein|Name=jgi.p|Nanoce1779_2|639743|organism=Nannochloropsis oceanica|type=polypeptide|length=1170bp
MSVLEAEALKALKLVKADLDATKRVKQQLEATLETKEATVATLQSKVDAL
TLEVQFLSSAGDEGGGSIGEGTPDNEKENEAVLHLKEHLAALEGTLETER
ASILPSDEKEAEAQPEAAAAAAIQKKKDEDAVAAAAAAAAAEKMRAQEIR
HNNEKKILQSQVKRLEKEGEEGRRRRREEGEEAGRRRKEAEEGWREERAE
LQGRIARLEEEGKERKRVMEEKEEMWKKEVHRLGREKEEAAEGFGEAERM
LNKREMEWKKEMDEREGSWRMEKEAGVEGWRRQVDALRREKGWIEEQLGL
AQAAAAAAAAAGGGTEAAVDGGKRTGEGEEEEGKEVIAALRREVASLEDA
LAIAREEGEEGRERGVFMEEALLAARREVEEGRVRVKELEDRQKRKEGGQ
GGEDDGVWRARVALLEAALGKVKEEKQSLAVDRKLLKAHVRKLESEKQQQ
ALEASTHTSTVLLPLPPVPAPRAAVPSSSSTASSSSSSSSSSSTLPREGG
SEGRGGGREGEGGGVEVDAMRQLQEDFMRLNAELREAEARHRRQEEEKEE
EIIQLRETFKVLVEQHLGPGRQWGKPQWDGGGGEGREGGKEGGGILEQMK
NVVTALTLQVGEAEAQLAVARLKVRELEEEKEEQQQRQQQQQQQPQQQQQ
QEYQQQPQQQYSPFLPPTVVEETEGEAETARLKEINMALRREVERGKSEL
DATRATLGVAQRRVEEGRERGKVLEAEIGELRKSAKAKTVGTTTARKGGR
KGGREEENGVAATGLLLGEAKEEEGRDGGGGGGGGRGEEGGGELATTPTT
TTFLSSPLNDEAKVKVAEEPHPLPPFGLDSPVVAHLLDAWTHDETKLEYL
RTWLRYLVHDKLASLPPGYTPGVQLLGLRPETKDGFVVLLLPILRHARPE
LNILVQSRGSPSHPGGYDLRIKILNLKKSTQQFSTAAAAPAAMGTIALTS
SFLEGRAGFREAMRSLGSLQKMTTAAATATAATATATMTSSGRSWGRSSS
SSSSSSVNSGSSSSSSSSGGGGGGGDSGDVLNLEGGEREEREEAAAAVKR
SEGAASASSSSAFSFMNPPPLLPLQTSPKQQQQQRTTPLPALPPSPSSAS
SSSSPSPIRSSVTTVTSSAMPLSSGKSESWGNSSGSSASRRMLAQSIEKR
LAALQQKQEKVEKEKGERK*
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Synonyms
Publications