NO11G03200, NO11G03200 (gene) Nannochloropsis oceanica

Overview
NameNO11G03200
Unique NameNO11G03200
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1366
Alignment locationchr11:1000197..1001562 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:1000197..1001562 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO11G03200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G03200.1NO11G03200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591818gene_5233Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G03200.1NO11G03200.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G03200 ID=NO11G03200|Name=NO11G03200|organism=Nannochloropsis oceanica|type=gene|length=1366bp
ATGGGCAACGTTTTTCCTCCTTCTCCCAACGGCGACGGCATCCAGCGCCC
GCAAGCCCCTGCAACAACACGAACCCCGGCAGTTGCTGCCCGGTGGCGGC
CGCATCATCCCCAGTCCGGCTGTGAGAAAATTTTTTGCAATGGCTTTTGC
GAGGATAACTGTCGCTTCTCTGTTTCGAGGTTGGCATCTGCCTCCTACCT
TTCTAGACGGGACAGGAGGAGTGGGGAGGTTGATGAGATGGACGAGGAAG
AAAAAGAGGGCAGAGAGACATCGACACCCGTATCTAGATGGTGGCAACAG
AAGCGACAAAGGGAGGAGCAACAGGAGGTTTTGGAAGAAGAGGAAGGGGA
AGAGATCGGGAAAGGTGTGGAGGCAACGAGACGACACCACCGGCACTTAA
CCAAGCGGCATAGAATAATTCTGACGAGCGTGGCCTTGGACCGGGCGCAA
ATGGAGCAGGAGGCAAGACGAATACAGTACCCACGGATAGGATTGGGGAA
AGGCGATGGGGAAAGTATCATTTCTCAAACAGTGAAGGAGAAAGGGGAAG
AGGGGGACGAGGAAGAGGACGAGAAAGAAGAGGAGGAGGAGCAAGCGCAG
CAGCAGCAGCAGCAGCAGGGAGGAGAAGGACACAAAGTGGTGAGAAAAAA
TAGCGGACAAAAGCGAGGAAACCGACTAGTAGAGGGCGAGAAAGTACATG
AAGAAGAAGGAAAAGATGAGGAAGGAAAAGATGAGGAAGGAGGAGAGGAG
GATGGAGGGGGTCCTCAGATGAAGAAGGCAGAGGCCGAGTTTGGAACGAG
AAAGAGCGAGATGAAGAGTATGCGTATGACGGGGGATAGAGAGGAAGAAG
AAGAGGTGGAGGAGGAAGAGGAGGATGAGAATAAATACGTGAAAGTTTCT
TCAGGCGGAATGGTTCAAACGGAGGAAGAAAAGAAAAAGCCCAGAGGGGA
TGGGGAGGAGGAGGAGGAGAGAGAGGACGAAGAGGAGGGGGATAAGAAGA
AGGAGGAGGAGGATTAGGCAGAGGAGGACAAAGAAGAAGGGAAAGAGAAG
GAAGAGAAAGAGGAGGAAGAGGAAGAAGAGGAAGGTAAGGTTGGAGGAGG
AGGAGTGAAAGGAGGGGAGGAGAGTATGAAGTCGCAGAATCTGAGAATCT
GGTGGTGAGTGTGGCGTGGCCAACCACGGCGATGCCGACGGCGACAGTGG
AGATGATGAAAGAGGACGACAATATCAAGGAGATGGAGAAACATACATTT
ACACACACAAACATACGTATATTTACGCAGTATTTCACAGAAGGACTCCT
TCAATCAAGGAGCCGGATGAGGTCAGAACTGAAGCCAGCTTCCATGCGAA
AGAAATGGCTCTAAAG
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protein sequence of NO11G03200.1

>NO11G03200.1-protein ID=NO11G03200.1-protein|Name=NO11G03200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=339bp
MGNVFPPSPNGDGIQRPQAPATTRTPAVAARWRPHHPQSGCEKIFCNGFC
EDNCRFSVSRLASASYLSRRDRRSGEVDEMDEEEKEGRETSTPVSRWWQQ
KRQREEQQEVLEEEEGEEIGKGVEATRRHHRHLTKRHRIILTSVALDRAQ
MEQEARRIQYPRIGLGKGDGESIISQTVKEKGEEGDEEEDEKEEEEEQAQ
QQQQQQGGEGHKVVRKNSGQKRGNRLVEGEKVHEEEGKDEEGKDEEGGEE
DGGGPQMKKAEAEFGTRKSEMKSMRMTGDREEEEEVEEEEEDENKYVKVS
SGGMVQTEEEKKKPRGDGEEEEEREDEEEGDKKKEEED*
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Synonyms
Publications