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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr11 | genome | chr11:1000197..1001562 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO11G03200.1 ID=NO11G03200.1|Name=NO11G03200.1|organism=Nannochloropsis oceanica|type=mRNA|length=1366bp ATGGGCAACGTTTTTCCTCCTTCTCCCAACGGCGACGGCATCCAGCGCCC GCAAGCCCCTGCAACAACACGAACCCCGGCAGTTGCTGCCCGGTGGCGGC CGCATCATCCCCAGTCCGGCTGTGAGAAAATTTTTTGCAATGGCTTTTGC GAGGATAACTGTCGCTTCTCTGTTTCGAGGTTGGCATCTGCCTCCTACCT TTCTAGACGGGACAGGAGGAGTGGGGAGGTTGATGAGATGGACGAGGAAG AAAAAGAGGGCAGAGAGACATCGACACCCGTATCTAGATGGTGGCAACAG AAGCGACAAAGGGAGGAGCAACAGGAGGTTTTGGAAGAAGAGGAAGGGGA AGAGATCGGGAAAGGTGTGGAGGCAACGAGACGACACCACCGGCACTTAA CCAAGCGGCATAGAATAATTCTGACGAGCGTGGCCTTGGACCGGGCGCAA ATGGAGCAGGAGGCAAGACGAATACAGTACCCACGGATAGGATTGGGGAA AGGCGATGGGGAAAGTATCATTTCTCAAACAGTGAAGGAGAAAGGGGAAG AGGGGGACGAGGAAGAGGACGAGAAAGAAGAGGAGGAGGAGCAAGCGCAG CAGCAGCAGCAGCAGCAGGGAGGAGAAGGACACAAAGTGGTGAGAAAAAA TAGCGGACAAAAGCGAGGAAACCGACTAGTAGAGGGCGAGAAAGTACATG AAGAAGAAGGAAAAGATGAGGAAGGAAAAGATGAGGAAGGAGGAGAGGAG GATGGAGGGGGTCCTCAGATGAAGAAGGCAGAGGCCGAGTTTGGAACGAG AAAGAGCGAGATGAAGAGTATGCGTATGACGGGGGATAGAGAGGAAGAAG AAGAGGTGGAGGAGGAAGAGGAGGATGAGAATAAATACGTGAAAGTTTCT TCAGGCGGAATGGTTCAAACGGAGGAAGAAAAGAAAAAGCCCAGAGGGGA TGGGGAGGAGGAGGAGGAGAGAGAGGACGAAGAGGAGGGGGATAAGAAGA AGGAGGAGGAGGATTAGGCAGAGGAGGACAAAGAAGAAGGGAAAGAGAAG GAAGAGAAAGAGGAGGAAGAGGAAGAAGAGGAAGGTAAGGTTGGAGGAGG AGGAGTGAAAGGAGGGGAGGAGAGTATGAAGTCGCAGAATCTGAGAATCT GGTGGTGAGTGTGGCGTGGCCAACCACGGCGATGCCGACGGCGACAGTGG AGATGATGAAAGAGGACGACAATATCAAGGAGATGGAGAAACATACATTT ACACACACAAACATACGTATATTTACGCAGTATTTCACAGAAGGACTCCT TCAATCAAGGAGCCGGATGAGGTCAGAACTGAAGCCAGCTTCCATGCGAA AGAAATGGCTCTAAAG back to topprotein sequence of NO11G03200.1 >NO11G03200.1-protein ID=NO11G03200.1-protein|Name=NO11G03200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=339bp MGNVFPPSPNGDGIQRPQAPATTRTPAVAARWRPHHPQSGCEKIFCNGFC EDNCRFSVSRLASASYLSRRDRRSGEVDEMDEEEKEGRETSTPVSRWWQQ KRQREEQQEVLEEEEGEEIGKGVEATRRHHRHLTKRHRIILTSVALDRAQ MEQEARRIQYPRIGLGKGDGESIISQTVKEKGEEGDEEEDEKEEEEEQAQ QQQQQQGGEGHKVVRKNSGQKRGNRLVEGEKVHEEEGKDEEGKDEEGGEE DGGGPQMKKAEAEFGTRKSEMKSMRMTGDREEEEEVEEEEEDENKYVKVS SGGMVQTEEEKKKPRGDGEEEEEREDEEEGDKKKEEED* back to topmRNA from alignment at chr11:1000197..1001562+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO11G03200.1 ID=NO11G03200.1|Name=NO11G03200.1|organism=Nannochloropsis oceanica|type=mRNA|length=1366bp|location=Sequence derived from alignment at chr11:1000197..1001562+ (Nannochloropsis oceanica) ATGGGCAACGTTTTTCCTCCTTCTCCCAACGGCGACGGCATCCAGCGCCC
GCAAGCCCCTGCAACAACACGAACCCCGGCAGTTGCTGCCCGGTGGCGGC
CGCATCATCCCCAGTCCGGCTGTGAGAAAATTTTTTGCAATGGCTTTTGC
GAGGATAACTGTCGCTTCTCTGTTTCGAGGTTGGCATCTGCCTCCTACCT
TTCTAGACGGGACAGGAGGAGTGGGGAGGTTGATGAGATGGACGAGGAAG
AAAAAGAGGGCAGAGAGACATCGACACCCGTATCTAGATGGTGGCAACAG
AAGCGACAAAGGGAGGAGCAACAGGAGGTTTTGGAAGAAGAGGAAGGGGA
AGAGATCGGGAAAGGTGTGGAGGCAACGAGACGACACCACCGGCACTTAA
CCAAGCGGCATAGAATAATTCTGACGAGCGTGGCCTTGGACCGGGCGCAA
ATGGAGCAGGAGGCAAGACGAATACAGTACCCACGGATAGGATTGGGGAA
AGGCGATGGGGAAAGTATCATTTCTCAAACAGTGAAGGAGAAAGGGGAAG
AGGGGGACGAGGAAGAGGACGAGAAAGAAGAGGAGGAGGAGCAAGCGCAG
CAGCAGCAGCAGCAGCAGGGAGGAGAAGGACACAAAGTGGTGAGAAAAAA
TAGCGGACAAAAGCGAGGAAACCGACTAGTAGAGGGCGAGAAAGTACATG
AAGAAGAAGGAAAAGATGAGGAAGGAAAAGATGAGGAAGGAGGAGAGGAG
GATGGAGGGGGTCCTCAGATGAAGAAGGCAGAGGCCGAGTTTGGAACGAG
AAAGAGCGAGATGAAGAGTATGCGTATGACGGGGGATAGAGAGGAAGAAG
AAGAGGTGGAGGAGGAAGAGGAGGATGAGAATAAATACGTGAAAGTTTCT
TCAGGCGGAATGGTTCAAACGGAGGAAGAAAAGAAAAAGCCCAGAGGGGA
TGGGGAGGAGGAGGAGGAGAGAGAGGACGAAGAGGAGGGGGATAAGAAGA
AGGAGGAGGAGGATTAGGCAGAGGAGGACAAAGAAGAAGGGAAAGAGAAG
GAAGAGAAAGAGGAGGAAGAGGAAGAAGAGGAAGGTAAGGTTGGAGGAGG
AGGAGTGAAAGGAGGGGAGGAGAGTATGAAGTCGCAGAATCTGAGAATCT
GGTGGTGAGTGTGGCGTGGCCAACCACGGCGATGCCGACGGCGACAGTGG
AGATGATGAAAGAGGACGACAATATCAAGGAGATGGAGAAACATACATTT
ACACACACAAACATACGTATATTTACGCAGTATTTCACAGAAGGACTCCT
TCAATCAAGGAGCCGGATGAGGTCAGAACTGAAGCCAGCTTCCATGCGAA
AGAAATGGCTCTAAAG back to topCoding sequence (CDS) from alignment at chr11:1000197..1001562+ >NO11G03200.1 ID=NO11G03200.1|Name=NO11G03200.1|organism=Nannochloropsis oceanica|type=CDS|length=1017bp|location=Sequence derived from alignment at chr11:1000197..1001562+ (Nannochloropsis oceanica) ATGGGCAACGTTTTTCCTCCTTCTCCCAACGGCGACGGCATCCAGCGCCC GCAAGCCCCTGCAACAACACGAACCCCGGCAGTTGCTGCCCGGTGGCGGC CGCATCATCCCCAGTCCGGCTGTGAGAAAATTTTTTGCAATGGCTTTTGC GAGGATAACTGTCGCTTCTCTGTTTCGAGGTTGGCATCTGCCTCCTACCT TTCTAGACGGGACAGGAGGAGTGGGGAGGTTGATGAGATGGACGAGGAAG AAAAAGAGGGCAGAGAGACATCGACACCCGTATCTAGATGGTGGCAACAG AAGCGACAAAGGGAGGAGCAACAGGAGGTTTTGGAAGAAGAGGAAGGGGA AGAGATCGGGAAAGGTGTGGAGGCAACGAGACGACACCACCGGCACTTAA CCAAGCGGCATAGAATAATTCTGACGAGCGTGGCCTTGGACCGGGCGCAA ATGGAGCAGGAGGCAAGACGAATACAGTACCCACGGATAGGATTGGGGAA AGGCGATGGGGAAAGTATCATTTCTCAAACAGTGAAGGAGAAAGGGGAAG AGGGGGACGAGGAAGAGGACGAGAAAGAAGAGGAGGAGGAGCAAGCGCAG CAGCAGCAGCAGCAGCAGGGAGGAGAAGGACACAAAGTGGTGAGAAAAAA TAGCGGACAAAAGCGAGGAAACCGACTAGTAGAGGGCGAGAAAGTACATG AAGAAGAAGGAAAAGATGAGGAAGGAAAAGATGAGGAAGGAGGAGAGGAG GATGGAGGGGGTCCTCAGATGAAGAAGGCAGAGGCCGAGTTTGGAACGAG AAAGAGCGAGATGAAGAGTATGCGTATGACGGGGGATAGAGAGGAAGAAG AAGAGGTGGAGGAGGAAGAGGAGGATGAGAATAAATACGTGAAAGTTTCT TCAGGCGGAATGGTTCAAACGGAGGAAGAAAAGAAAAAGCCCAGAGGGGA TGGGGAGGAGGAGGAGGAGAGAGAGGACGAAGAGGAGGGGGATAAGAAGA AGGAGGAGGAGGATTAG back to top
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