NO11G03130, NO11G03130 (gene) Nannochloropsis oceanica

Overview
NameNO11G03130
Unique NameNO11G03130
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3824
Alignment locationchr11:980955..984778 +

Link to JBrowse

Properties
Property NameValue
Description26S proteasome regulatory subunit T3
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:980955..984778 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0036402proteasome-activating ATPase activity
GO:0005524ATP binding
GO:0016787hydrolase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR035256PSMC4
IPR003959ATPase_AAA_core
IPR003593AAA+_ATPase
Vocabulary: Biological Process
TermDefinition
GO:0019538protein metabolic process
GO:0009987cellular process
GO:0009056catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
[Close]
BLAST of NO11G03130 vs. NCBI_GenBank
Match: EWM24897.1 (ATPase, AAA-type, core [Nannochloropsis gaditana])

HSP 1 Score: 721.1 bits (1860), Expect = 2.000e-204
Identity = 386/411 (93.92%), Postives = 392/411 (95.38%), Query Frame = 0 
Query:    1 MASAAVATRVPGMDMEMDGXXXXXXXXXXXXEDLYTRMKQLQRHLEFVDIQEEYIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQFNEMIDAHYGIVGSTAGSTYYVRILSTLDREKLKPNVSVALHRHSHSVVDILPPESDTTIQLMAEKPDVSYNDIGGMDIQKQEVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVAQATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPNPDRRQKRMVFQACTAKMNLGDDVDLEDYVNRPEKISAADVAAIAQEAGLQAVRKNRYVILARDFDAAYKKHVTKADKEHHFYTM 412
            MAS AVATR PG+ M+   XXXXXXXXXXXX DLYTR+KQLQR LEFVDIQEEYIKDE        IRAKEEVKRIQSVPLVIGQFNEMIDAHYGIVGSTAGSTYYVRILSTLDREKLKPNVSVALHRHSHSVVDILPPESD+TIQLM EKPDVSYNDIGGMDIQKQEVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVAQATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSI+FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPNPDRRQKRMVFQACTAKMNLGDDVDLEDYVNRPEKISAADVAAIAQEAGLQAVRKNRYVILARDFD AYKKHVTKADKEH FY+M
Sbjct:    1 MASVAVATRTPGL-MDXXXXXXXXXXXXXXXXDLYTRLKQLQRQLEFVDIQEEYIKDEXXXXXXXXIRAKEEVKRIQSVPLVIGQFNEMIDAHYGIVGSTAGSTYYVRILSTLDREKLKPNVSVALHRHSHSVVDILPPESDSTIQLMQEKPDVSYNDIGGMDIQKQEVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVAQATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPNPDRRQKRMVFQACTAKMNLGDDVDLEDYVNRPEKISAADVAAIAQEAGLQAVRKNRYVILARDFDEAYKKHVTKADKEHWFYSM 410
[Close]
BLAST of NO11G03130 vs. NCBI_GenBank
Match: EWM24898.1 (ATPase, AAA-type, core [Nannochloropsis gaditana])

HSP 1 Score: 721.1 bits (1860), Expect = 2.000e-204
Identity = 386/411 (93.92%), Postives = 392/411 (95.38%), Query Frame = 0 
Query:    1 MASAAVATRVPGMDMEMDGXXXXXXXXXXXXEDLYTRMKQLQRHLEFVDIQEEYIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQFNEMIDAHYGIVGSTAGSTYYVRILSTLDREKLKPNVSVALHRHSHSVVDILPPESDTTIQLMAEKPDVSYNDIGGMDIQKQEVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVAQATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPNPDRRQKRMVFQACTAKMNLGDDVDLEDYVNRPEKISAADVAAIAQEAGLQAVRKNRYVILARDFDAAYKKHVTKADKEHHFYTM 412
            MAS AVATR PG+ M+   XXXXXXXXXXXX DLYTR+KQLQR LEFVDIQEEYIKDE        IRAKEEVKRIQSVPLVIGQFNEMIDAHYGIVGSTAGSTYYVRILSTLDREKLKPNVSVALHRHSHSVVDILPPESD+TIQLM EKPDVSYNDIGGMDIQKQEVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVAQATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSI+FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPNPDRRQKRMVFQACTAKMNLGDDVDLEDYVNRPEKISAADVAAIAQEAGLQAVRKNRYVILARDFD AYKKHVTKADKEH FY+M
Sbjct:    1 MASVAVATRTPGL-MDXXXXXXXXXXXXXXXXDLYTRLKQLQRQLEFVDIQEEYIKDEXXXXXXXXIRAKEEVKRIQSVPLVIGQFNEMIDAHYGIVGSTAGSTYYVRILSTLDREKLKPNVSVALHRHSHSVVDILPPESDSTIQLMQEKPDVSYNDIGGMDIQKQEVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVAQATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPNPDRRQKRMVFQACTAKMNLGDDVDLEDYVNRPEKISAADVAAIAQEAGLQAVRKNRYVILARDFDEAYKKHVTKADKEHWFYSM 410
[Close]
BLAST of NO11G03130 vs. NCBI_GenBank
Match: XP_005855008.1 (26S proteasome regulatory subunit T3 [Nannochloropsis gaditana CCMP526] >EKU21348.1 26S proteasome regulatory subunit T3 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 719.5 bits (1856), Expect = 5.700e-204
Identity = 385/411 (93.67%), Postives = 390/411 (94.89%), Query Frame = 0 
Query:    1 MASAAVATRVPGMDMEMDGXXXXXXXXXXXXEDLYTRMKQLQRHLEFVDIQEEYIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQFNEMIDAHYGIVGSTAGSTYYVRILSTLDREKLKPNVSVALHRHSHSVVDILPPESDTTIQLMAEKPDVSYNDIGGMDIQKQEVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVAQATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPNPDRRQKRMVFQACTAKMNLGDDVDLEDYVNRPEKISAADVAAIAQEAGLQAVRKNRYVILARDFDAAYKKHVTKADKEHHFYTM 412
            MAS AVATR PG+      XXXXXXXXXXXX  LYTR+KQLQR LEFVDIQEEYIKDE       LIRAKEEVKRIQSVPLVIGQFNEMIDAHYGIVGSTAGSTYYVRILSTLDREKLKPNVSVALHRHSHSVVDILPPESD+TIQLM EKPDVSYNDIGGMDIQKQEVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVAQATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSI+FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPNPDRRQKRMVFQACTAKMNLGDDVDLEDYVNRPEKISAADVAAIAQEAGLQAVRKNRYVILARDFD AYKKHVTKADKEH FY+M
Sbjct:    1 MASVAVATRTPGLMDXXXXXXXXXXXXXXXXXXLYTRLKQLQRQLEFVDIQEEYIKDEXXXXXXXLIRAKEEVKRIQSVPLVIGQFNEMIDAHYGIVGSTAGSTYYVRILSTLDREKLKPNVSVALHRHSHSVVDILPPESDSTIQLMQEKPDVSYNDIGGMDIQKQEVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVAQATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPNPDRRQKRMVFQACTAKMNLGDDVDLEDYVNRPEKISAADVAAIAQEAGLQAVRKNRYVILARDFDEAYKKHVTKADKEHWFYSM 411
[Close]
BLAST of NO11G03130 vs. NCBI_GenBank
Match: CBJ27612.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 673.7 bits (1737), Expect = 3.600e-190
Identity = 334/380 (87.89%), Postives = 363/380 (95.53%), Query Frame = 0 
Query:   32 EDLYTRMKQLQRHLEFVDIQEEYIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQFNEMIDAHYGIVGSTAGSTYYVRILSTLDREKLKPNVSVALHRHSHSVVDILPPESDTTIQLMAEKPDVSYNDIGGMDIQKQEVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVAQATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPNPDRRQKRMVFQACTAKMNLGDDVDLEDYVNRPEKISAADVAAIAQEAGLQAVRKNRYVILARDFDAAYKKHVTKADKEHHFYTM 412
            +D+Y ++K LQ+H+EF+DIQEEYIKDEMKNLKRELIRAKEE+KRIQSVPLVIGQFNE+IDA+YGIVGSTAGS Y+VRILSTLDRE LKPN SVALHRHSHSVV+ILPPESD+TIQLM E+PDV+Y+DIGGMD+QKQEVKEAVELPLTHF+LYKQIGIDPPRGVLMYGPPGTGKTMMAKAVA AT+ASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPS++FIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFP PDRRQKRMVF ACTAKMNL ++VDLEDYVNRPEK+SAAD++AIAQEAGLQAVRKNRYV+L +D D AYKKHV K D EH FY+M
Sbjct:   36 QDVYVKLKSLQKHMEFLDIQEEYIKDEMKNLKRELIRAKEEIKRIQSVPLVIGQFNEIIDANYGIVGSTAGSNYFVRILSTLDREVLKPNTSVALHRHSHSVVEILPPESDSTIQLMQERPDVTYHDIGGMDMQKQEVKEAVELPLTHFDLYKQIGIDPPRGVLMYGPPGTGKTMMAKAVANATSASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSVVFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPVPDRRQKRMVFTACTAKMNLSEEVDLEDYVNRPEKVSAADISAIAQEAGLQAVRKNRYVVLGKDLDKAYKKHVNKHDTEHAFYSM 415
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BLAST of NO11G03130 vs. NCBI_GenBank
Match: XP_024585405.1 (26s protease regulatory subunit 6b [Plasmopara halstedii] >CEG49036.1 26s protease regulatory subunit 6b [Plasmopara halstedii])

HSP 1 Score: 650.2 bits (1676), Expect = 4.300e-183
Identity = 322/379 (84.96%), Postives = 357/379 (94.20%), Query Frame = 0 
Query:   33 DLYTRMKQLQRHLEFVDIQEEYIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQFNEMIDAHYGIVGSTAGSTYYVRILSTLDREKLKPNVSVALHRHSHSVVDILPPESDTTIQL--MAEKPDVSYNDIGGMDIQKQEVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVAQATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPNPDRRQKRMVFQACTAKMNLGDDVDLEDYVNRPEKISAADVAAIAQEAGLQAVRKNRYVILARDFDAAYKKHVTKADKEHHFY 410
            DLY + K L+RHLEF+DIQE YIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQF EM+DA+YGIVGSTAGS YYVRILSTLDRE+LKPN SVALHRHSH+VVD+LPPESD++IQ+  M+E+PDVSY+DIGGMDIQKQEV+EAVELPLTHF+LYKQIG+DPPRGVLMYGPPGTGKTM+AKAVA ATTA+FISVVGSEFVQKYLGEGPRMVRDVFRLA+ENSP+I+FIDE+DAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+TNVKVIMATNRADTLDPALLRPGRLDRKIEFP PDRRQKR+++QACTAKMNLGD+VDLEDYVNRPEKIS+AD+A+I QEAGLQAVRKNRYV+L +DFD  YK  + +AD    FY
Sbjct:   26 DLYVKFKSLERHLEFLDIQEGYIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQFLEMVDANYGIVGSTAGSNYYVRILSTLDRERLKPNSSVALHRHSHAVVDVLPPESDSSIQMMQMSERPDVSYSDIGGMDIQKQEVREAVELPLTHFDLYKQIGVDPPRGVLMYGPPGTGKTMLAKAVANATTAAFISVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIVFIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDQATNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIYQACTAKMNLGDEVDLEDYVNRPEKISSADIASICQEAGLQAVRKNRYVVLPKDFDKGYKSAIKRADTTFEFY 404
[Close]
BLAST of NO11G03130 vs. NCBI_GenBank
Match: XP_009514770.1 (hypothetical protein PHYSODRAFT_554008 [Phytophthora sojae] >EGZ27495.1 hypothetical protein PHYSODRAFT_554008 [Phytophthora sojae])

HSP 1 Score: 649.8 bits (1675), Expect = 5.600e-183
Identity = 322/379 (84.96%), Postives = 357/379 (94.20%), Query Frame = 0 
Query:   33 DLYTRMKQLQRHLEFVDIQEEYIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQFNEMIDAHYGIVGSTAGSTYYVRILSTLDREKLKPNVSVALHRHSHSVVDILPPESDTTIQL--MAEKPDVSYNDIGGMDIQKQEVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVAQATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPNPDRRQKRMVFQACTAKMNLGDDVDLEDYVNRPEKISAADVAAIAQEAGLQAVRKNRYVILARDFDAAYKKHVTKADKEHHFY 410
            DLY + K L+RHLEF+DIQE YIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQF EM+DA+YGIVGSTAGS YYVRILSTLDRE+LKPN SVALHRHSH+VVD+LPPESD++IQ+  M+E+PDVSY+DIGGMDIQKQEV+EAVELPLTHF+LYKQIG+DPPRGVLMYGPPGTGKTM+AKAVA ATTA+FISVVGSEFVQKYLGEGPRMVRDVFRLA+ENSP+I+FIDE+DAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+TNVKVIMATNRADTLDPALLRPGRLDRKIEFP PDRRQKR+++QACTAKMNLGD+VDLEDYVNRPEKIS+AD+A+I QEAGLQAVRKNRYV+L +DFD  YK  + +AD    FY
Sbjct:   26 DLYAKYKSLERHLEFLDIQEGYIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQFLEMVDANYGIVGSTAGSNYYVRILSTLDRERLKPNSSVALHRHSHAVVDVLPPESDSSIQMMQMSERPDVSYSDIGGMDIQKQEVREAVELPLTHFDLYKQIGVDPPRGVLMYGPPGTGKTMLAKAVANATTAAFISVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIVFIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDQATNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIYQACTAKMNLGDEVDLEDYVNRPEKISSADIASICQEAGLQAVRKNRYVVLPKDFDKGYKNAIKRADTTFEFY 404
[Close]
BLAST of NO11G03130 vs. NCBI_GenBank
Match: ETI35279.1 (26S protease regulatory subunit 6B [Phytophthora parasitica P1569])

HSP 1 Score: 649.8 bits (1675), Expect = 5.600e-183
Identity = 322/379 (84.96%), Postives = 357/379 (94.20%), Query Frame = 0 
Query:   33 DLYTRMKQLQRHLEFVDIQEEYIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQFNEMIDAHYGIVGSTAGSTYYVRILSTLDREKLKPNVSVALHRHSHSVVDILPPESDTTIQL--MAEKPDVSYNDIGGMDIQKQEVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVAQATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPNPDRRQKRMVFQACTAKMNLGDDVDLEDYVNRPEKISAADVAAIAQEAGLQAVRKNRYVILARDFDAAYKKHVTKADKEHHFY 410
            DLY + K L+RHLEF+DIQE YIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQF EM+DA+YGIVGSTAGS YYVRILSTLDRE+LKPN SVALHRHSH+VVD+LPPESD++IQ+  M+E+PDVSY+DIGGMDIQKQEV+EAVELPLTHF+LYKQIG+DPPRGVLMYGPPGTGKTM+AKAVA ATTA+FISVVGSEFVQKYLGEGPRMVRDVFRLA+ENSP+I+FIDE+DAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+TNVKVIMATNRADTLDPALLRPGRLDRKIEFP PDRRQKR+++QACTAKMNLGD+VDLEDYVNRPEKIS+AD+A+I QEAGLQAVRKNRYV+L +DFD  YK  + +AD    FY
Sbjct:   56 DLYAKYKSLERHLEFLDIQEGYIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQFLEMVDANYGIVGSTAGSNYYVRILSTLDRERLKPNSSVALHRHSHAVVDVLPPESDSSIQMMQMSERPDVSYSDIGGMDIQKQEVREAVELPLTHFDLYKQIGVDPPRGVLMYGPPGTGKTMLAKAVANATTAAFISVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIVFIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDQATNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIYQACTAKMNLGDEVDLEDYVNRPEKISSADIASICQEAGLQAVRKNRYVVLPKDFDKGYKNAIKRADTTFEFY 434
[Close]
BLAST of NO11G03130 vs. NCBI_GenBank
Match: XP_008913005.1 (26S protease regulatory subunit 6B [Phytophthora parasitica INRA-310] >ETK75538.1 26S protease regulatory subunit 6B [Phytophthora parasitica] >ETL28996.1 26S protease regulatory subunit 6B [Phytophthora parasitica] >ETL82206.1 26S protease regulatory subunit 6B [Phytophthora parasitica] >ETM35443.1 26S protease regulatory subunit 6B [Phytophthora parasitica] >ETN01690.1 26S protease regulatory subunit 6B [Phytophthora parasitica INRA-310] >ETO64020.1 26S protease regulatory subunit 6B [Phytophthora parasitica P1976] >ETP05131.1 26S protease regulatory subunit 6B [Phytophthora parasitica CJ01A1] >ETP33249.1 26S protease regulatory subunit 6B [Phytophthora parasitica P10297] >KUF95660.1 26S protease regulatory subunit 6B [Phytophthora nicotianae])

HSP 1 Score: 649.8 bits (1675), Expect = 5.600e-183
Identity = 322/379 (84.96%), Postives = 357/379 (94.20%), Query Frame = 0 
Query:   33 DLYTRMKQLQRHLEFVDIQEEYIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQFNEMIDAHYGIVGSTAGSTYYVRILSTLDREKLKPNVSVALHRHSHSVVDILPPESDTTIQL--MAEKPDVSYNDIGGMDIQKQEVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVAQATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPNPDRRQKRMVFQACTAKMNLGDDVDLEDYVNRPEKISAADVAAIAQEAGLQAVRKNRYVILARDFDAAYKKHVTKADKEHHFY 410
            DLY + K L+RHLEF+DIQE YIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQF EM+DA+YGIVGSTAGS YYVRILSTLDRE+LKPN SVALHRHSH+VVD+LPPESD++IQ+  M+E+PDVSY+DIGGMDIQKQEV+EAVELPLTHF+LYKQIG+DPPRGVLMYGPPGTGKTM+AKAVA ATTA+FISVVGSEFVQKYLGEGPRMVRDVFRLA+ENSP+I+FIDE+DAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+TNVKVIMATNRADTLDPALLRPGRLDRKIEFP PDRRQKR+++QACTAKMNLGD+VDLEDYVNRPEKIS+AD+A+I QEAGLQAVRKNRYV+L +DFD  YK  + +AD    FY
Sbjct:   26 DLYAKYKSLERHLEFLDIQEGYIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQFLEMVDANYGIVGSTAGSNYYVRILSTLDRERLKPNSSVALHRHSHAVVDVLPPESDSSIQMMQMSERPDVSYSDIGGMDIQKQEVREAVELPLTHFDLYKQIGVDPPRGVLMYGPPGTGKTMLAKAVANATTAAFISVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIVFIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDQATNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIYQACTAKMNLGDEVDLEDYVNRPEKISSADIASICQEAGLQAVRKNRYVVLPKDFDKGYKNAIKRADTTFEFY 404
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BLAST of NO11G03130 vs. NCBI_GenBank
Match: XP_002896373.1 (26S protease regulatory subunit 6B [Phytophthora infestans T30-4] >EEY67608.1 26S protease regulatory subunit 6B [Phytophthora infestans T30-4])

HSP 1 Score: 649.8 bits (1675), Expect = 5.600e-183
Identity = 322/379 (84.96%), Postives = 357/379 (94.20%), Query Frame = 0 
Query:   33 DLYTRMKQLQRHLEFVDIQEEYIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQFNEMIDAHYGIVGSTAGSTYYVRILSTLDREKLKPNVSVALHRHSHSVVDILPPESDTTIQL--MAEKPDVSYNDIGGMDIQKQEVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVAQATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPNPDRRQKRMVFQACTAKMNLGDDVDLEDYVNRPEKISAADVAAIAQEAGLQAVRKNRYVILARDFDAAYKKHVTKADKEHHFY 410
            DLY + K L+RHLEF+DIQE YIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQF EM+DA+YGIVGSTAGS YYVRILSTLDRE+LKPN SVALHRHSH+VVD+LPPESD++IQ+  M+E+PDVSY+DIGGMDIQKQEV+EAVELPLTHF+LYKQIG+DPPRGVLMYGPPGTGKTM+AKAVA ATTA+FISVVGSEFVQKYLGEGPRMVRDVFRLA+ENSP+I+FIDE+DAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+TNVKVIMATNRADTLDPALLRPGRLDRKIEFP PDRRQKR+++QACTAKMNLGD+VDLEDYVNRPEKIS+AD+A+I QEAGLQAVRKNRYV+L +DFD  YK  + +AD    FY
Sbjct:   26 DLYAKYKSLERHLEFLDIQEGYIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQFLEMVDANYGIVGSTAGSNYYVRILSTLDRERLKPNSSVALHRHSHAVVDVLPPESDSSIQMMQMSERPDVSYSDIGGMDIQKQEVREAVELPLTHFDLYKQIGVDPPRGVLMYGPPGTGKTMLAKAVANATTAAFISVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIVFIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDQATNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIYQACTAKMNLGDEVDLEDYVNRPEKISSADIASICQEAGLQAVRKNRYVVLPKDFDKGYKNAIKRADTTFEFY 404
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BLAST of NO11G03130 vs. NCBI_GenBank
Match: OWZ15042.1 (26S protease regulatory protein [Phytophthora megakarya])

HSP 1 Score: 648.7 bits (1672), Expect = 1.200e-182
Identity = 321/379 (84.70%), Postives = 357/379 (94.20%), Query Frame = 0 
Query:   33 DLYTRMKQLQRHLEFVDIQEEYIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQFNEMIDAHYGIVGSTAGSTYYVRILSTLDREKLKPNVSVALHRHSHSVVDILPPESDTTIQL--MAEKPDVSYNDIGGMDIQKQEVKEAVELPLTHFELYKQIGIDPPRGVLMYGPPGTGKTMMAKAVAQATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPNPDRRQKRMVFQACTAKMNLGDDVDLEDYVNRPEKISAADVAAIAQEAGLQAVRKNRYVILARDFDAAYKKHVTKADKEHHFY 410
            D+Y + K L+RHLEF+DIQE YIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQF EM+DA+YGIVGSTAGS YYVRILSTLDRE+LKPN SVALHRHSH+VVD+LPPESD++IQ+  M+E+PDVSY+DIGGMDIQKQEV+EAVELPLTHF+LYKQIG+DPPRGVLMYGPPGTGKTM+AKAVA ATTA+FISVVGSEFVQKYLGEGPRMVRDVFRLA+ENSP+I+FIDE+DAIATKRFDAQTGADREVQRILLELLNQMDGFDQ+TNVKVIMATNRADTLDPALLRPGRLDRKIEFP PDRRQKR+++QACTAKMNLGD+VDLEDYVNRPEKIS+AD+A+I QEAGLQAVRKNRYV+L +DFD  YK  + +AD    FY
Sbjct:   25 DVYAKYKSLERHLEFLDIQEGYIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQFLEMVDANYGIVGSTAGSNYYVRILSTLDRERLKPNSSVALHRHSHAVVDVLPPESDSSIQMMQMSERPDVSYSDIGGMDIQKQEVREAVELPLTHFDLYKQIGVDPPRGVLMYGPPGTGKTMLAKAVANATTAAFISVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIVFIDEVDAIATKRFDAQTGADREVQRILLELLNQMDGFDQATNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIYQACTAKMNLGDEVDLEDYVNRPEKISSADIASICQEAGLQAVRKNRYVVLPKDFDKGYKNAIKRADTTFEFY 403
The following BLAST results are available for this feature:
BLAST of NO11G03130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24897.12.000e-20493.92ATPase, AAA-type, core [Nannochloropsis gaditana][more]
EWM24898.12.000e-20493.92ATPase, AAA-type, core [Nannochloropsis gaditana][more]
XP_005855008.15.700e-20493.6726S proteasome regulatory subunit T3 [Nannochlorop... [more]
CBJ27612.13.600e-19087.89conserved unknown protein [Ectocarpus siliculosus][more]
XP_024585405.14.300e-18384.9626s protease regulatory subunit 6b [Plasmopara hal... [more]
XP_009514770.15.600e-18384.96hypothetical protein PHYSODRAFT_554008 [Phytophtho... [more]
ETI35279.15.600e-18384.9626S protease regulatory subunit 6B [Phytophthora p... [more]
XP_008913005.15.600e-18384.9626S protease regulatory subunit 6B [Phytophthora p... [more]
XP_002896373.15.600e-18384.9626S protease regulatory subunit 6B [Phytophthora i... [more]
OWZ15042.11.200e-18284.7026S protease regulatory protein [Phytophthora mega... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001935NSK001935Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G03130.1NO11G03130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591778gene_5224Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100116g4gene5599Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G03130.1NO11G03130.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G03130 ID=NO11G03130|Name=NO11G03130|organism=Nannochloropsis oceanica|type=gene|length=3824bp
CAGAGCCCACACACATGGCTTCTGCTGCGGTGGCGACTAGAGTGCCGGGG
ATGGACATGGAGATGGACGGCGGCGGCGCGGCCAAGgtgagttagcagag
gaggggaaggagggagggaggagggaggcggtcatgaggcgtgttcctgc
tcccggtatcgaccggcacgaccatagaaaagagcaggcgttaaacaatt
gataagaggagggagggtgggcatggacggccaagcgccgtctccaacgt
gctccaccacgacgccagatgagggagggagggaggaagggagaggaagg
gatgggtgccttgtgttgtcatttctggctcgttcagccgtccaccagca
tgcatccactttgcatcacaaggagggagagtgacaatatgttggctctg
tcgggcggggaagtgttcctactcttcccgcggcctcacatacatttctt
caccctgcttcaaaccctccctctctaacgtcatgaacagCACCACGAGG
AGGAGCAGAACGAGGACTTGTACACGCGCATGAAGCAACTGCAGCGGCAT
TTGGAGTTTGTGGATATCCAGGAAGAGTATATTAAGGACGAGATGAAGAA
CTTGAAGCGGGAGCTCATCCGgtgcgtgggtcggggggagggaggggagg
ggaacgggataggggttgggagggaagggagaaataagggcgaatggaag
agatatagaggaggaggaggaagtgggtggatgtgtgtgtgtatgtatgg
agggggtgtatgtgtgtgtaggcgtgaatgtagtgtgtaggtgtgtagat
gtgtaggtgtgtcggtgtgtatacagtcggaaatgtcaagccgctattcc
ccactcatcctcctccccactcaccctcccacctttcctcccacccttca
accacggcagAGCCAAGGAGGAGGTGAAGCGCATCCAGTCGGTGCCGTTG
GTTATTGGCCAGTTCAACGAGATGATCGATGCGCACTACGGCATCGTCGG
CTCCACTGgtgcgagggagggagggagggagggaggagaaggagggaggg
aggagaaggagggaggagaaggagggagggagggagggagggagggaggg
agggagggagggaagtatcctgttatatggttgtctcgttgctttgacgt
ctgtactcccgccacacgtcgactcgccctccctccctccctctctccct
ccctccagtagccagctcttcgccattcggaccttcaaggaggaagtcaa
gcccatgtctgctttgtcccctcacccctccctccctccctccctccctc
cctccctccctccctcccgctctccagCCGGATCCACCTACTACGTCCGT
ATCCTTTCCACCCTCGATCGGGAGAAGCTGAAGCCCAACGTCTCTGTGGC
CCTGCACCGACACTCACACTCCGTTGTAGATATCCTCCCACCTGAGAGTG
ACACCACCATCCAGCTCATGGCTGAGAAGCCGGACGTATCCTACAATGAC
ATCGGAGGGATGGACATCCAGAAGCAGgttcggagggaggaaaggagcga
tggagggagggagggagagagacagagccgtcggtggattcttgagtgag
gggggggcatggatgtttcctagcaactgggatgccctccctccctccct
ccctccctccctccctccctccttcgatcccttctccatccaaatcatca
ttgtctgtctacgccaccatttattccctttcccctcatcccatttcctt
ctctctctctccccccctcttcctccccctcagGAGGTAAAGGAGGCGGT
GGAGCTTCCCCTGACCCATTTTGAGCTCTACAAGCAGATCGGTATCGATC
CTCCCCGGGGCGTGCTTATGTACGGACCTCCCGGGACGGGCAAGACGATG
ATGGCGAAGGCGGTGGCACAAGCCACTACCGCCTCCTTCATTTCCGTCGT
GGGgtgagcagggagggagggagggagggaggagtttttttggggggggg
gggaggtggtggttctgcatttcctgtcgagtcatttaattgccgtttac
ctctcccccctcccacgctcccttccttacatcttatcctccctccttcc
ctccctccctccttcccttcctccctccccctccccctttctctagCTCG
GAGTTCGTCCAGAAGTATCTCGGGGAGGGTCCACGGATGGTGCGTGACGT
TTTCCGCCTGGCGCGCGAAAACTCTCCCTCCATCATCTTCATCGACGAGA
TCGACGCCATTGCCACCAAGCGCTTCGATGCTCAGACTGGAGCGgtacgt
gaaacaacaaacaacatccctctctctttttttttttttttcttctctct
ctctctctctccctctctctctctctctctccctccctccctccctctcc
ctccatccctccctccctccctccctccctccctccctccctccctccct
ccccactctttcgcttgttcatttcaaacgaggcagtgtccagactggag
cagggtgttgtcagagggagggagggagggagggagggagggagggaaga
acacaacatgcatgcatgtgcaaaatggtttcatgattctgactctcctt
ccccttctccctcccttcctccctccctccctccctccctcccttcctcc
ttctctccctccctcccttcctcagGACCGAGAGGTGCAGCGTATTTTGC
TGGAGCTGTTGAACCAGATGGACGGCTTCGACCAGAGCACCAACGTCAAG
gcaagccctcccctccctcccctccctccctccctccctccctccctccc
ttcccctcctgtcttccttctcccctcccccccccccctcgcgtgctttt
ccgcttccaatcccaaccctgtccctggcatctccctcatcccccctccc
tccgtccctccctccgtccctccctccgtccctccctccgtccctccctc
cgtccctccctccgtccctccctccgtccctccctccgtccctcccccac
agGTCATCATGGCCACCAATCGCGCCGATACCTTGGATCCCGCCCTCCTC
CGTCCCGGTCGATTGGATCGAAAGATCGAATTTCCAAATCCGGACCGACG
GCAGAAGCGCATGGTCTTCCAAGCCTGCACGGCCAAGATGAACCTCGgtt
agcatccctccctccctccctccctccctccccccccccttccactcttg
ttggttccatgcccatgacgggtcccgcccttaaaccatcggtcaagccg
cctgacctctccctccctccctccctccccccctccctcgctcagGCGAC
GACGTCGATCTGGAGGATTATGTTAATAGACCCGAGAAAATCAGTGCGGC
GGACGTGGCTGCCATTGCCCAGgtagggagggagggagggagggaagaga
gacagatctgtctgcctttttatcgtttgccgggtgctgccaagcgatgt
ttattccatttactcacggcttcccgtccctccctcgctcgctccctccc
tcagGAGGCTGGCCTCCAGGCCGTTCGGAAAAACCGTTACGTCATTTTGG
CGCGTGATTTCGACGCGGCCTACAAGAAACACGTGACCAAGGCCGACAAG
GAGCATCATTTCTACACCATGTGATATCGAGTATAGAGCATAAAAGAAAA
GGAGGGATAAATGGAAGGAGGAAGGGAAGGGGAAGAAGGGGGAGAAGGGA
TCTTTTGAGGGAGGGAGGGAAGAAGAACGATGAGAGGTGAAAAGCGACTA
GAGACCCCCCAAAAAAGGAACGTTGTGGAAAATAATAAGTGCCAGAGAAG
ACGAGTCGTTGACTCGCCCTTCTC
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protein sequence of NO11G03130.1

>NO11G03130.1-protein ID=NO11G03130.1-protein|Name=NO11G03130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=412bp
MASAAVATRVPGMDMEMDGGGAAKHHEEEQNEDLYTRMKQLQRHLEFVDI
QEEYIKDEMKNLKRELIRAKEEVKRIQSVPLVIGQFNEMIDAHYGIVGST
AGSTYYVRILSTLDREKLKPNVSVALHRHSHSVVDILPPESDTTIQLMAE
KPDVSYNDIGGMDIQKQEVKEAVELPLTHFELYKQIGIDPPRGVLMYGPP
GTGKTMMAKAVAQATTASFISVVGSEFVQKYLGEGPRMVRDVFRLARENS
PSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVI
MATNRADTLDPALLRPGRLDRKIEFPNPDRRQKRMVFQACTAKMNLGDDV
DLEDYVNRPEKISAADVAAIAQEAGLQAVRKNRYVILARDFDAAYKKHVT
KADKEHHFYTM*
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Synonyms
Publications