NO11G03060, NO11G03060 (gene) Nannochloropsis oceanica

Overview
NameNO11G03060
Unique NameNO11G03060
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2623
Alignment locationchr11:958777..961399 +

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Properties
Property NameValue
DescriptionNadh:ubiquinone oxidoreductase complex i intermediate-associated protein 30
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:958777..961399 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR008979Galactose-bd-like
IPR016040NAD(P)-bd_dom
IPR013857NADH-UbQ_OxRdtase-assoc_prot30
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
Homology
BLAST of NO11G03060 vs. NCBI_GenBank
Match: PNW82116.1 (hypothetical protein CHLRE_06g274650v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 288.9 bits (738), Expect = 4.100e-74
Identity = 192/516 (37.21%), Postives = 270/516 (52.33%), Query Frame = 0
Query:  116 VVFGATGRAGREIVQALLKEGHDVIAAVRNESKLNDVF-----GSYALTGTTPAASGQGLLDYVTGVDVTNPATLMEGDVPDVLKEAAHVVVALGPVGGLQPGGGFGFFPGLTSEDVDYKGVVKVVDAVAAAMGAXXXXXXXXXXXXXXXXXQTLFRFETPEDVAKWQRLDDVIMGGRSSSTLQLNAEK-------GYATYTGSLVVEDGGFCGTRASGAGVSVDLSGFDGVRLRVRGDGRRYKLNVKTTDTL-ASENVYQAAFDTMDLEEGEGWQTITLPFHRFFPVVRNRVDYRGAPLQSSSQVAVSFGLVYSRFEFNRQANPYYAPGAFALAMQE-LSLYRSQRPAIVLVSSAGAERNAKV-ETEEDRKKEIPIVMLNPGGILNWKYRAETYLRASSLPYTILRPCGLVPEKAFGDEPPTGKLQAGQGDVITGRLTRQDLGSAVAASLASPFSVGKTLEIRRDEAADANSKAGVGKRERTTDMTAIELFQPLVKDKDRAVSGQFNLLPFPEAV 617
            +V GATGR GR +V  LL  G  V+AA R+  K  DV      G   LT         G L ++   D+T+  +L       + +  + VV+ +G V G  P GGFG   G+TSE V+ +G+  ++  +   +                   + +    T ED+A W +LDDVIMGG S S L+  +E        G A + G+L+ E GGFCGTR +  G  +DLSG DG+ +RV GDG+ +K+N+KT D     E+ YQ  FDT+       W  + LP+H F  V R + D  G PL  S       GLV SRFEFN+  NP Y PG+FAL + + +S Y   RP +V++SSAG ERNA + + E  R ++IPIV LNP G LN KY AE  +R+S  PYT++R  G++     G   P     A QGDVI G+++R+++   +A +   P S  KT E+RR+E  ++  K     R+         LF  L +DK R    +  L P P+AV
Sbjct:  108 LVLGATGRLGRRVVAKLLASGRTVVAAARSLDKARDVLLGSGEGKMGLTEGRQPGGRPGAL-FLEEFDITSVESLKRS---GLWQGVSQVVLTVGTVFGPLPEGGFGVIGGMTSEVVEAQGISALMSVLPEVL-----------PKKAQRSSRLVLPMRTAEDLAVWNKLDDVIMGGASDSGLEPISEAEREGLGCGGAVWRGTLITEGGGFCGTRTNKLG--LDLSGSDGIHMRVLGDGQTFKMNIKTIDQEDVPESTYQTTFDTV----AGQWSDVYLPWHNFVAVKRAQSDPEGVPLDPSR--ISKLGLVLSRFEFNKAPNPDYKPGSFALLLADGISAYTDVRPQVVMISSAGVERNAIIGDDEVKRMQDIPIVQLNPNGTLNHKYTAEIAVRSSGYPYTVVRSTGMIDSMEGGPFLP----DADQGDVIIGQISREEVAECMAMAANMPESAYKTFELRRNEGPESKGKRSATARDFQ------RLFLKLTQDKYR---WRVGLQPMPKAV 587          
BLAST of NO11G03060 vs. NCBI_GenBank
Match: GAQ80379.1 (hypothetical protein KFL_000530070 [Klebsormidium nitens])

HSP 1 Score: 258.5 bits (659), Expect = 6.000e-65
Identity = 202/549 (36.79%), Postives = 275/549 (50.09%), Query Frame = 0
Query:  116 VVFGATGRAGREIVQALLKEGHDVIAAVRNESKLNDVFGSYALTGTTPAASGQGLLDYVTGVDVTNPATLMEGDVPDV--LKEAAHVVVALGPVGGLQPGGGFGFFPGLTSEDVDYKGVVKVVDAVAAAMGAXXXXXXXXXXXXXXXXXQTLFRFE--------TPEDVA---KWQRLDDVIMGGRSSSTLQLNAEKGYATYTGSLVVEDGGFCGTRASGAGVSVDLSGFDGVRLRVRGDGRRYKLNVKTTDTLASENVYQAAFDTMDLEEGEGWQTITLPFHRFFPVVRNRVDYRGAPLQSSSQVAVSFGLVYSRFEFNRQANPYYAPGAFALAMQELSLYRSQRPAIVLVSSAGAERNAKVETEEDRKKEIPIVMLNPGGILNWKYRAETYLRASSLPYTILRPCGLVPEKAFGDEPPTGKLQAGQGDVITGRLTRQDLGSAVAASLASPFSVGKTLEIRRD---EAADANSKAGVGKRERTTDMTAIELFQPLVKDKDRAVSGQFNLLPFPEAVDPPAPVSKERAQEILNDPRVKAQQERDRALVA 649
            +V GATG+ GR +V+ LL   ++VIA V +E +  +VF      G T   SG GLL            T   G + DV  LKE    V A+    G + GG         SE+   +G+ +++   A                      Q +F F          P++ A    W RLDDVIMGG S S+ +   E G A + G++ VE GGF   RA  A    DLSGFDG+ LRV+GDG+RYKLN+K+T   A E  YQA+FDT+    G+ W  +++PF RF PVVR RV   G  L +S    +S  +V SRFE++   N  + PG F L ++ +S Y+  RP  VLVSSA  ER+ +  T E R + IPIV LNPG IL WK  +E  L+AS L Y I+RPCGL  E    D+    +L+  QGD ITG+++R +    VAA+L S  +V  T E+RRD   +  D     G+ +R R   +  I  F P  K             P  +  DP A  + E A+ +      K Q E  +A V+
Sbjct:  136 LVVGATGKLGRLLVKELLDRSYEVIALVASEERAEEVFVKEG--GMTMGRSGNGLL------------TAKVGTLDDVESLKETLKGVDAVVSAAGSRRGG---------SEEELTRGLAQLMRTFA----------DLSEGREAQLREQAIFDFRGAPAGDNGAPQNGAALEDWTRLDDVIMGGISDSSFK--QEGGRAIFQGTVRVEGGGFASHRA--ALPKTDLSGFDGISLRVKGDGKRYKLNMKST-VEAPEFTYQASFDTV---RGQ-WVDVSIPFDRFRPVVRARVVEDGPKLDTSDIKTIS--VVLSRFEYDGFPNYVFTPGPFRLEIEHISAYKKPRPQFVLVSSAAVERSNRARTPEQRDRSIPIVKLNPGDILTWKLVSEDILKASGLAYAIVRPCGLTEE----DQDTPFELEVAQGDAITGKVSRAEAARVVAATLDSADTVYTTFEVRRDALTKGFDTTDWVGLFRRLRPDVLPGIVAFTPPPK-------------PTEDKEDPDAKKAAEVAKAL------KQQVEGAKAAVS 617          
BLAST of NO11G03060 vs. NCBI_GenBank
Match: WP_015154354.1 (NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 [Chroococcidiopsis thermalis] >AFY87806.1 NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 [Chroococcidiopsis thermalis PCC 7203])

HSP 1 Score: 209.9 bits (533), Expect = 2.400e-50
Identity = 157/469 (33.48%), Postives = 229/469 (48.83%), Query Frame = 0
Query:  114 VSVVFGATGRAGREIVQALLKEGHDVIAAVRNESKLNDVFGSYALTGTTPAASGQGLLDYVTGVDVTNPATLMEGDVPDVLKEAAHVVVALGPVGGLQP-----GGGFGFFP----GLTSEDVDYKGVVKVVDAVAAAMGAXXXXXXXXXXXXXXXXXQTLFRFE--TPEDVAKWQRLDDVIMGGRSSSTLQLNAEKGYATYTGSL-VVEDGGFCGTRASGAGVSVDLSGFDGVRLRVRGDGRRYKLNVKTTDTLASENVYQAAFDTMDLEEGEGWQTITLPFHRFFPVVRNRVDYRGAPLQSSSQVAVSFGLVYSRFEFNRQANPYYAPGAFALAMQELSLYRSQRPAIVLVSSAGAERNAK--VETEEDRKKEIPIVMLNP--GGILNWKYRAETYLRASSLPYTILRPCGLVPEKAFGDEPPTGKLQAGQGDVITGRLTRQDLGSAVAASLASPFSVGKTLEIRRD 567
            V +V GATG  G+ +VQ LL+ G+ V + VR++ K + + G+   T             YV   D+T P TL    + +V        V + PVGG  P       G  F+     G T E V+Y GV  +V A A                      + +F F   TP+    W  +DDV+MGG S S  ++   +G A +TG++     GGF   R       +DLSG++GV LRVRGDG+RYK  ++ T++      Y  +FDT+  E    W T+ +PF++   V R +     AP   ++++  S  L+ S+FE+N + NP ++PG FAL ++ +  Y S RP  +LVSSAG  R  +  +  EE    E P V LN   GGIL WK+R E  +R S +PYTI+RPC L       +EP    L   QGD I G+++R  +       +  P     T E++ D
Sbjct:   53 VILVAGATGGVGKRVVQRLLERGYQVRSLVRDKDKASSILGNNVET-------------YVG--DITQPETLTPAMMANVRAVICCTAVRVQPVGGDTPDREKYNQGVKFYQPEIVGDTPERVEYLGVKNLVQAAA------------QYWQQNPSGEKIVFDFSQPTPQLQQIWGAVDDVVMGGVSQS--EIRFVEGTALFTGNVSTANSGGFASVRTKNFTSPLDLSGYEGVTLRVRGDGKRYKFFLR-TESSWDGMAYSYSFDTVANE----WITVRIPFNQLTAVFRAKT-ISDAPAIDTTKIR-SLQLMLSKFEYNGELNPQFSPGGFALQVESIGAYGSARPQFILVSSAGVTRPNRPGINLEE----EPPAVRLNDQLGGILTWKWRGEEAVRESGVPYTIIRPCALT------EEPEIQPLVFDQGDNIKGKVSRDSIAELCVRVVEQPQDGNLTFEVKAD 475          
BLAST of NO11G03060 vs. NCBI_GenBank
Match: WP_106547480.1 (NADH:ubiquinone oxidoreductase [Chroococcidiopsis sp. CCALA 051] >PSM46722.1 NADH:ubiquinone oxidoreductase [Chroococcidiopsis sp. CCALA 051])

HSP 1 Score: 209.9 bits (533), Expect = 2.400e-50
Identity = 157/469 (33.48%), Postives = 229/469 (48.83%), Query Frame = 0
Query:  114 VSVVFGATGRAGREIVQALLKEGHDVIAAVRNESKLNDVFGSYALTGTTPAASGQGLLDYVTGVDVTNPATLMEGDVPDVLKEAAHVVVALGPVGGLQP-----GGGFGFFP----GLTSEDVDYKGVVKVVDAVAAAMGAXXXXXXXXXXXXXXXXXQTLFRFE--TPEDVAKWQRLDDVIMGGRSSSTLQLNAEKGYATYTGSL-VVEDGGFCGTRASGAGVSVDLSGFDGVRLRVRGDGRRYKLNVKTTDTLASENVYQAAFDTMDLEEGEGWQTITLPFHRFFPVVRNRVDYRGAPLQSSSQVAVSFGLVYSRFEFNRQANPYYAPGAFALAMQELSLYRSQRPAIVLVSSAGAERNAK--VETEEDRKKEIPIVMLNP--GGILNWKYRAETYLRASSLPYTILRPCGLVPEKAFGDEPPTGKLQAGQGDVITGRLTRQDLGSAVAASLASPFSVGKTLEIRRD 567
            V +V GATG  G+ +VQ LL+ G+ V + VR++ K + + G+   T             YV   D+T P TL    + +V        V + PVGG  P       G  F+     G T E V+Y GV  +V A A                      + +F F   TP+    W  +DDV+MGG S S  ++   +G A +TG++     GGF   R       +DLSG++GV LRVRGDG+RYK  ++ T++      Y  +FDT+  E    W T+ +PF++   V R +     AP   ++++  S  L+ S+FE+N + NP ++PG FAL ++ +  Y S RP  +LVSSAG  R  +  +  EE    E P V LN   GGIL WK+R E  +R S +PYTI+RPC L       +EP    L   QGD I G+++R  +       +  P     T E++ D
Sbjct:   53 VILVAGATGGVGKRVVQRLLERGYQVRSLVRDKDKASSILGNNVET-------------YVG--DITQPETLTPAMMANVRAVICCTAVRVQPVGGDTPDREKYNQGVKFYQPEIVGDTPERVEYLGVKNLVQAAA------------QYWQQNPSGEKIVFDFSQPTPQLQQIWGAVDDVVMGGVSQS--EIRFVEGTALFTGNVSTANSGGFASVRTKNFTSPLDLSGYEGVTLRVRGDGKRYKFFLR-TESSWDGMAYSYSFDTVANE----WITVRIPFNQLTAVFRAKT-ISDAPAIDTTKIR-SLQLMLSKFEYNGELNPQFSPGGFALQVESIGAYGSARPQFILVSSAGVTRPNRPGINLEE----EPPAVRLNDQLGGILTWKWRGEEAVRESGVPYTIIRPCALT------EEPEIQPLVFDQGDNIKGKVSRDSIAELCVRVVEQPQDGNLTFEVKAD 475          
BLAST of NO11G03060 vs. NCBI_GenBank
Match: OBQ20911.1 (NADH:ubiquinone oxidoreductase [Anabaena sp. WA113])

HSP 1 Score: 209.1 bits (531), Expect = 4.100e-50
Identity = 157/474 (33.12%), Postives = 227/474 (47.89%), Query Frame = 0
Query:  114 VSVVFGATGRAGREIVQALLKEGHDVIAAVRNESKLNDVFGSYALTGTTPAASGQGLLDYVTGVDVTNPATLMEGDVPDVLKEAAHVVVALGPVGGLQP-----GGGFGFF----PGLTSEDVDYKGVVKVVDAVAAAMGAXXXXXXXXXXXXXXXXXQTLFRFETPEDVAK--WQRLDDVIMGGRSSSTLQLNAEKGYATYTGSL-VVEDGGFCGTRASGAGVSVDLSGFDGVRLRVRGDGRRYKLNVKTTDTLASENVYQAAFDTMDLEEGEGWQTITLPFHRFFPVVRNRVDYRGAPLQSSSQVAVSFGLVYSRFEFNRQANPYYAPGAFALAMQELSLYRSQR-PAIVLVSSAGAERNAKVETEEDRKKEIPIVMLNP--GGILNWKYRAETYLRASSLPYTILRPCGLVPEKAFGDEPPTGKLQAGQGDVITGRLTRQDLGSAVAASLASPFSVGKTLEIRRDEAADAN 573
            V +V GATG  G+ +V+ L+ +G+ V   VR+  K   + G                +D V G D+T P TL    + ++        V + PV G  P       G  F+     G T E+V+YKGV  +V+     +                   +T+F F  P D  K  W  LDDV+MGG SSS+ Q+   +  A +TG++     GGF   R       +DLSG++GV+LRV+GDG+RYK+ ++T  T      Y  +FDT+       W  I +PF   F V R ++     P+  S     S  L+ S+FE++   NP + PG FAL ++ +  Y  +  P  +L+SSAG  R  +     D  +E P V LN   GGIL WK R E  L+AS +PYTI+RPC L  E A G E     L   QGD I G+++R D+      ++  P +   T E++  E A  N
Sbjct:   53 VILVAGATGGVGKRVVKKLVAQGYYVRCLVRDIEKARPILGDD--------------IDLVVG-DITKPETLTNLVMANIQAVICCTAVRVQPVEGDTPDRAKYNQGVKFYLPEIVGDTPENVEYKGVKNLVETAKKYL--------------VPVDKKTIFDFTKPSDEIKNIWGALDDVVMGGVSSSSFQI--RENTAVFTGNVSTANSGGFASVRTKNFSHLLDLSGYEGVKLRVKGDGQRYKIFLRTESTWDGVG-YSYSFDTV----ANNWLDIQIPFTDLFGVFRAKIVKECPPMDISK--VCSLQLMLSKFEYDGALNPAFNPGIFALEVESIQAYGGETLPQFILISSAGVTRPGRPGINLD--EEPPAVRLNDQLGGILTWKLRGEESLKASGIPYTIIRPCALT-ETAGGKE-----LIFAQGDNIKGKVSRDDIAEICVQAIKEPKAKNLTFEVKEGEMAVNN 480          
BLAST of NO11G03060 vs. NCBI_GenBank
Match: OBQ42766.1 (NADH:ubiquinone oxidoreductase [Aphanizomenon flos-aquae WA102])

HSP 1 Score: 209.1 bits (531), Expect = 4.100e-50
Identity = 157/474 (33.12%), Postives = 227/474 (47.89%), Query Frame = 0
Query:  114 VSVVFGATGRAGREIVQALLKEGHDVIAAVRNESKLNDVFGSYALTGTTPAASGQGLLDYVTGVDVTNPATLMEGDVPDVLKEAAHVVVALGPVGGLQP-----GGGFGFF----PGLTSEDVDYKGVVKVVDAVAAAMGAXXXXXXXXXXXXXXXXXQTLFRFETPEDVAK--WQRLDDVIMGGRSSSTLQLNAEKGYATYTGSL-VVEDGGFCGTRASGAGVSVDLSGFDGVRLRVRGDGRRYKLNVKTTDTLASENVYQAAFDTMDLEEGEGWQTITLPFHRFFPVVRNRVDYRGAPLQSSSQVAVSFGLVYSRFEFNRQANPYYAPGAFALAMQELSLYRSQR-PAIVLVSSAGAERNAKVETEEDRKKEIPIVMLNP--GGILNWKYRAETYLRASSLPYTILRPCGLVPEKAFGDEPPTGKLQAGQGDVITGRLTRQDLGSAVAASLASPFSVGKTLEIRRDEAADAN 573
            V +V GATG  G+ +V+ L+ +G+ V   VR+  K   + G                +D V G D+T P TL    + ++        V + PV G  P       G  F+     G T E+V+YKGV  +V+     +                   +T+F F  P D  K  W  LDDV+MGG SSS+ Q+   +  A +TG++     GGF   R       +DLSG++GV+LRV+GDG+RYK+ ++T  T      Y  +FDT+       W  I +PF   F V R ++     P+  S     S  L+ S+FE++   NP + PG FAL ++ +  Y  +  P  +L+SSAG  R  +     D  +E P V LN   GGIL WK R E  L+AS +PYTI+RPC L  E A G E     L   QGD I G+++R D+      ++  P +   T E++  E A  N
Sbjct:   53 VILVAGATGGVGKRVVKKLVAQGYYVRCLVRDIEKARPILGDD--------------IDLVVG-DITKPETLTSLVMANIQAVICCTAVRVQPVEGDTPDRAKYNQGVKFYLPEIVGDTPENVEYKGVKNLVETAKKYL--------------VPVDKKTIFDFTKPSDEIKNIWGALDDVVMGGVSSSSFQI--RENTAVFTGNVSTANSGGFASVRTKNFSHLLDLSGYEGVKLRVKGDGQRYKIFLRTESTWDGVG-YSYSFDTV----ANNWLDIQIPFTDLFGVFRAKIVKECPPMDISK--VCSLQLMLSKFEYDGALNPAFNPGIFALEVESIQAYGGETLPQFILISSAGVTRPGRPGINLD--EEPPAVRLNDQLGGILTWKLRGEESLKASGIPYTIIRPCALT-ETAGGKE-----LIFAQGDNIKGKVSRDDIAEICVQAIKEPKAKNLTFEVKEGEMAVNN 480          
BLAST of NO11G03060 vs. NCBI_GenBank
Match: WP_096670948.1 (NADH:ubiquinone oxidoreductase [Dolichospermum compactum] >BAZ88402.1 NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 [Dolichospermum compactum NIES-806])

HSP 1 Score: 209.1 bits (531), Expect = 4.100e-50
Identity = 158/474 (33.33%), Postives = 230/474 (48.52%), Query Frame = 0
Query:  114 VSVVFGATGRAGREIVQALLKEGHDVIAAVRNESKLNDVFGSYALTGTTPAASGQGLLDYVTGVDVTNPATLMEGDVPDVLKEAAHVVVALGPVGGLQP-----GGGFGFF----PGLTSEDVDYKGVVKVVDAVAAAMGAXXXXXXXXXXXXXXXXXQTLFRFETPEDVAK--WQRLDDVIMGGRSSSTLQLNAEKGYATYTGSL-VVEDGGFCGTRASGAGVSVDLSGFDGVRLRVRGDGRRYKLNVKTTDTLASENVYQAAFDTMDLEEGEGWQTITLPFHRFFPVVRNRVDYRGAPLQSSSQVAVSFGLVYSRFEFNRQANPYYAPGAFALAMQELSLYRSQR-PAIVLVSSAGAERNAKVETEEDRKKEIPIVMLNP--GGILNWKYRAETYLRASSLPYTILRPCGLVPEKAFGDEPPTGKLQAGQGDVITGRLTRQDLGSAVAASLASPFSVGKTLEIRRDEAADAN 573
            V +V GATG  G+ +V+ L+ +G++V   VR+  K   V G                ++ V G D+T P TL    + ++        V + PV G  P       G  F+     G T E+V+Y+GV  +V A A  + A                 + +F F  P D  K  W  LDDV+MGG S+S+ Q+    G   +TG++     GGF   R       +DLSG+ GV+LRV+GDG+RYK+ ++T  T      Y  +FDT+       W  I +PF    PV R ++     P+  S   +V   L+ S+FE++   NP + PG FAL +  +  Y ++  P  VL+SSAG  R  +     D  +E P V LN   GGIL WK R E  L+AS +PYTI+RPC L  E A G E     L   QGD I G+++R D+      ++  P ++ +T E++  EA   N
Sbjct:   53 VILVAGATGGVGKRVVKKLITQGYNVRCLVRDIEKARQVLGDD--------------INLVVG-DITKPETLTNLVMANIQAVICCTSVRVQPVEGDTPDRAKYNQGVKFYLPEIVGDTPENVEYQGVKNLVTAAAKYLVA--------------AGEKPIFDFTKPSDEIKNIWGALDDVVMGGVSASSFQIRENIG--VFTGNVSTANSGGFASVRTKNFSPLLDLSGYQGVKLRVKGDGQRYKIFLRTESTWDGVG-YSYSFDTV----ANNWLDIQIPFTDLVPVFRAKIVKDCPPMDISKVCSVQ--LMLSKFEYDGALNPAFNPGFFALEVASIQAYGAETLPQFVLISSAGVTRPGRPGINLD--EEPPAVRLNDQLGGILTWKLRGEESLKASGIPYTIIRPCALT-EAAGGKE-----LIFEQGDNIKGKVSRDDVAEICVQAIKEPQAINRTFEVKEGEAIANN 480          
BLAST of NO11G03060 vs. NCBI_GenBank
Match: WP_027401452.1 (NADH:ubiquinone oxidoreductase [Aphanizomenon flos-aquae])

HSP 1 Score: 208.4 bits (529), Expect = 7.100e-50
Identity = 158/474 (33.33%), Postives = 230/474 (48.52%), Query Frame = 0
Query:  114 VSVVFGATGRAGREIVQALLKEGHDVIAAVRNESKLNDVFGSYALTGTTPAASGQGLLDYVTGVDVTNPATLMEGDVPDVLKEAAHVVVALGPVGGLQP-----GGGFGFF----PGLTSEDVDYKGVVKVVDAVAAAMGAXXXXXXXXXXXXXXXXXQTLFRFETPEDVAK--WQRLDDVIMGGRSSSTLQLNAEKGYATYTGSL-VVEDGGFCGTRASGAGVSVDLSGFDGVRLRVRGDGRRYKLNVKTTDTLASENVYQAAFDTMDLEEGEGWQTITLPFHRFFPVVRNRVDYRGAPLQSSSQVAVSFGLVYSRFEFNRQANPYYAPGAFALAMQELSLYRSQR-PAIVLVSSAGAERNAKVETEEDRKKEIPIVMLNP--GGILNWKYRAETYLRASSLPYTILRPCGLVPEKAFGDEPPTGKLQAGQGDVITGRLTRQDLGSAVAASLASPFSVGKTLEIRRDEAADAN 573
            V +V GATG  G+ +V+ L+ +G++V   VR+  K   V G                ++ V G D+T P TL    + ++        V + PV G  P       G  F+     G T E+V+Y+GV  +V A A  + A                 + +F F  P D  K  W  LDDV+MGG S+S+ Q+   +  A +TG++     GGF   R       +DLSG+ GV+LRV+GDG+RYK+ ++T  T      Y  +FDT+       W  I +PF    PV R ++  +  P    S+V  S  L+ S+FE++   NP + PG FAL +  +  Y  +  P  VL+SSAG  R  +     D  +E P V LN   GGIL WK R E  L+AS +PYTI+RPC L  E A G E     L   QGD I G+++R D+      ++  P ++ +T E++  E    N
Sbjct:   53 VILVAGATGGVGKRVVKKLITQGYNVRCLVRDIEKARQVLGDD--------------INLVVG-DITKPETLTNLVMANIQAVICCTSVRVQPVEGDTPDRAKYNQGVKFYLPEIVGDTPENVEYQGVKNLVTAAAKYLVA--------------AGEKPIFDFTKPSDEIKNIWGALDDVVMGGISASSFQI--RENTAVFTGNVSTANSGGFASVRTKNFSPLLDLSGYQGVKLRVKGDGQRYKIFIRTESTWDGVG-YSYSFDTV----ANNWLDIQIPFTDLVPVFRAKI-VKDCPPMDISKVC-SMQLMLSKFEYDGAFNPAFNPGFFALEVASIQAYGGETLPQFVLISSAGVTRPGRPGINLD--EEPPAVRLNDQLGGILTWKLRGEESLKASGIPYTIIRPCALT-ESAGGQE-----LIFEQGDNIRGKVSRDDVAEICVQAIKEPQAINRTFEVKEGEVIANN 480          
BLAST of NO11G03060 vs. NCBI_GenBank
Match: OBQ25009.1 (NADH:ubiquinone oxidoreductase [Aphanizomenon flos-aquae LD13])

HSP 1 Score: 208.4 bits (529), Expect = 7.100e-50
Identity = 157/474 (33.12%), Postives = 226/474 (47.68%), Query Frame = 0
Query:  114 VSVVFGATGRAGREIVQALLKEGHDVIAAVRNESKLNDVFGSYALTGTTPAASGQGLLDYVTGVDVTNPATLMEGDVPDVLKEAAHVVVALGPVGGLQP-----GGGFGFF----PGLTSEDVDYKGVVKVVDAVAAAMGAXXXXXXXXXXXXXXXXXQTLFRFETPEDVAK--WQRLDDVIMGGRSSSTLQLNAEKGYATYTGSL-VVEDGGFCGTRASGAGVSVDLSGFDGVRLRVRGDGRRYKLNVKTTDTLASENVYQAAFDTMDLEEGEGWQTITLPFHRFFPVVRNRVDYRGAPLQSSSQVAVSFGLVYSRFEFNRQANPYYAPGAFALAMQELSLYRSQR-PAIVLVSSAGAERNAKVETEEDRKKEIPIVMLNP--GGILNWKYRAETYLRASSLPYTILRPCGLVPEKAFGDEPPTGKLQAGQGDVITGRLTRQDLGSAVAASLASPFSVGKTLEIRRDEAADAN 573
            V +V GATG  G+ +V+ L+ +G+ V   VR+  K   + G                +D V G D+T P TL    + ++        V + PV G  P       G  F+     G T E+V+YKGV  +V      +                   +T+F F  P D  K  W  LDDV+MGG SSS+ Q+   +  A +TG++     GGF   R       +DLSG++GV+LRV+GDG+RYK+ ++T  T      Y  +FDT+       W  I +PF   F V R ++     P+  S     S  L+ S+FE++   NP + PG FAL ++ +  Y  +  P  +L+SSAG  R  +     D  +E P V LN   GGIL WK R E  L+AS +PYTI+RPC L  E A G E     L   QGD I G+++R D+      ++  P +   T E++  E A  N
Sbjct:   53 VILVAGATGGVGKRVVKKLVAQGYYVRCLVRDIEKARPILGDD--------------IDLVVG-DITKPETLTSLVMANIQAVICCTAVRVQPVEGDTPDRAKYNQGVKFYLPEIVGDTPENVEYKGVKNLVQTAKKYL--------------VPVDKKTIFDFTKPSDEIKNIWGALDDVVMGGVSSSSFQI--RENTAVFTGNVSTANSGGFASVRTKNFSHLLDLSGYEGVKLRVKGDGQRYKIFLRTESTWDGVG-YSYSFDTV----ANNWLDIQIPFTDLFGVFRAKIVKECPPMDISK--VCSLQLMLSKFEYDGALNPAFNPGIFALEVESIQAYGGETLPQFILISSAGVTRPGRPGINLD--EEPPAVRLNDQLGGILTWKLRGEESLKASGIPYTIIRPCALT-ETAGGKE-----LIFAQGDNIKGKVSRDDIAEICVQAIKEPKAKNLTFEVKEGEMAVNN 480          
BLAST of NO11G03060 vs. NCBI_GenBank
Match: OBQ28731.1 (NADH:ubiquinone oxidoreductase [Aphanizomenon flos-aquae MDT14a])

HSP 1 Score: 208.4 bits (529), Expect = 7.100e-50
Identity = 157/474 (33.12%), Postives = 227/474 (47.89%), Query Frame = 0
Query:  114 VSVVFGATGRAGREIVQALLKEGHDVIAAVRNESKLNDVFGSYALTGTTPAASGQGLLDYVTGVDVTNPATLMEGDVPDVLKEAAHVVVALGPVGGLQP-----GGGFGFF----PGLTSEDVDYKGVVKVVDAVAAAMGAXXXXXXXXXXXXXXXXXQTLFRFETPEDVAK--WQRLDDVIMGGRSSSTLQLNAEKGYATYTGSL-VVEDGGFCGTRASGAGVSVDLSGFDGVRLRVRGDGRRYKLNVKTTDTLASENVYQAAFDTMDLEEGEGWQTITLPFHRFFPVVRNRVDYRGAPLQSSSQVAVSFGLVYSRFEFNRQANPYYAPGAFALAMQELSLYRSQR-PAIVLVSSAGAERNAKVETEEDRKKEIPIVMLNP--GGILNWKYRAETYLRASSLPYTILRPCGLVPEKAFGDEPPTGKLQAGQGDVITGRLTRQDLGSAVAASLASPFSVGKTLEIRRDEAADAN 573
            V +V GATG  G+ +V+ L+ +G+ V   VR+  K   + G                +D V G D+T P TL    + ++        V + PV G  P       G  F+     G T E+V+YKGV  +V+     +                   +T+F F  P D  K  W  LDDV+MGG SSS+ Q+   +  A +TG++     GGF   R       +DLSG++GV+LRV+GDG+RYK+ ++T  T      Y  +FDT+       W  I +PF   F V R ++     P+  S     S  L+ S+FE++   NP + PG FAL ++ +  Y  +  P  +L+SSAG  R  +     D  +E P V LN   GGIL WK R E  L+AS +PYTI+RPC L  E A G E     L   QGD I G+++R D+      ++  P +   T E++  E A  N
Sbjct:   53 VILVAGATGGVGKRVVKKLVAQGYYVRCLVRDIEKARPILGDD--------------IDLVVG-DITKPETLTSLVMANIQAVICCTAVRVQPVEGDTPDRAKYNQGVKFYLPEIVGDTPENVEYKGVKNLVETSKKYL--------------VPVDKKTIFDFTKPSDEIKNIWGALDDVVMGGVSSSSFQI--RENTAVFTGNVSTANSGGFASVRTKNFSHLLDLSGYEGVKLRVKGDGQRYKIFLRTESTWDGVG-YSYSFDTV----ANNWLDIQIPFTDLFGVFRAKIVKECPPMDISK--VCSLQLMLSKFEYDGALNPAFNPGIFALEVESIQAYGGETLPQFILISSAGVTRPGRPGINLD--EEPPAVRLNDQLGGILTWKLRGEESLKASGIPYTIIRPCALT-ETAGGKE-----LIFAQGDNIKGKVSRDDIAEICVQAIKEPKAKNLTFEVKEGEMAVNN 480          
The following BLAST results are available for this feature:
BLAST of NO11G03060 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
PNW82116.14.100e-7437.21hypothetical protein CHLRE_06g274650v5 [Chlamydomo... [more]
GAQ80379.16.000e-6536.79hypothetical protein KFL_000530070 [Klebsormidium ... [more]
WP_015154354.12.400e-5033.48NADH:ubiquinone oxidoreductase complex I intermedi... [more]
WP_106547480.12.400e-5033.48NADH:ubiquinone oxidoreductase [Chroococcidiopsis ... [more]
OBQ20911.14.100e-5033.12NADH:ubiquinone oxidoreductase [Anabaena sp. WA113... [more]
OBQ42766.14.100e-5033.12NADH:ubiquinone oxidoreductase [Aphanizomenon flos... [more]
WP_096670948.14.100e-5033.33NADH:ubiquinone oxidoreductase [Dolichospermum com... [more]
WP_027401452.17.100e-5033.33NADH:ubiquinone oxidoreductase [Aphanizomenon flos... [more]
OBQ25009.17.100e-5033.12NADH:ubiquinone oxidoreductase [Aphanizomenon flos... [more]
OBQ28731.17.100e-5033.12NADH:ubiquinone oxidoreductase [Aphanizomenon flos... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001944NSK001944Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G03060.1NO11G03060.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|528801gene_5210Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100116g13gene5590Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G03060.1NO11G03060.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G03060 ID=NO11G03060|Name=NO11G03060|organism=Nannochloropsis oceanica|type=gene|length=2623bp
ATGCAATCGTCATCCAAAAGTCTGCGCCGCAGCGGATTGCTCCTTCTCTT
TCCCTGCTTGTTCTGGGGCGTTGTCGCTTTCCTCCCGGCCCCGGTTTTAC
CCACCCGGGACCCCTCCTCCTCGTCCTCGTGCCTGCACGCGGAGAACAAC
AACAATAAAGAGCCGAACCCACTGAGCAAACTCTTTACTCCGCCCGCGAC
GACCAACCCATTTGCGTCCTTCGGACAGCAAGTCACGTCGTTCTTCGAGA
AGCTCATGAGCGGTGGCGGGTTGCCTCCTGCTTCCTCTAAAGCCCTTCCC
CCCCCGACACCCAAACCCCGCCGTCGCACCGGTGGGCCCGTTTCGGTTGT
CTTTGGTGCCACTGGTCGGGCGGGGCGCGAGATCGTGCAAGCCTTGTTGA
AAGAGGGCCATGACGTCATTGCCGCGGTGAGGAATGAGTCGAAACTGAAC
GATGTCTTTGGCTCCTACGCCCTGACGGGCACGACGCCCGCGGCCTCGGG
GCAAGGACTGTTAGATTATGTGACGGGTGTGGACGTGACAAATCCAGCGA
CTTTAATGGAAGGAGACGTACCGGACGTTTTAAAAGAAGCGGCACATGTG
GTCGTGGCCTTGGGACCCGTTGGGGGACTGCAGCCCGGGGGAGGTTTTGG
ATTTTTCCCAGGACTGACCAGTGAAGATGTGGACTATAAGGGTGTGGTGA
AGGTGGTAGATGCCGTGGCGGCCGCCATGGGTGCAGGGAAGAAGGGGGGG
AAGAAGGTTTCGATGGAGGAGGAGGAGGAGAAGAGGCAGACATTGTTTCG
GTTTGAAACACCTGAGGACGTAGCCAAGTGGCAGCGGTTGGATGACGTGA
TCATGGGgtgagtaagacgtgagaaaggaagggagtgagtgagagggaga
gctagttgggaggaagaggggcatcatgcaggggggatgtcacaagcatg
cctgacagcgttaccccccagacctcacacatttctccccgacctttgct
cattttccccgcttccacgcagCGGCCGTTCTTCCTCCACCCTCCAATTA
AACGCCGAAAAGGGCTATGCTACCTACACCGGGAGCTTGGTGGTTGAGGA
TGGGGGGTTTTGCGGTACCAGGGCCTCGGGGGCAGGAGTCTCGGTGGACC
TGTCAGGCTTTGACGGCGTCCGTTTACGTGTCCGGGGGGATGGACGACGT
TACAAATTAAACGTCAAAACGACCGATACCCTCGCCTCGGAGAATGTGTA
CCAAGCCGCGTTTGACACCATGGACCTGGAGGAGGGGGAGGGCTGGCAGA
CGATTACTCTACCTTTCCATCGGTTCTTCCCCGTGGTCCGGAATCGGGTT
GATTACAGAGGAGCCCCCCTCCAGTCTTCCTCTCAGGTAGCCGTTAGCTT
CGGTCTCGTCTATTCCCGGTTTGAATTTAATCGACAAGCGAATCCTTACT
ATGCCCCCGGGGCGTTTGCGTTGGCCATGCAGGAGCTGTCGCTGTACCGC
AGCCAAAGGCCGGCGATTGTGTTGGTGTCGTCGGCGGGGGCGGAACGCAA
CGCCAAGGTGGAGACAGAGGAGGATAGGAAAAAGgtaggtcgccgtgtcc
ttcgcgccttctttcctgcacttcctccctcctctcctcccttcaatcgt
ccaaaaatgcttgtcatgcatattttcacctccctccctccctctcttct
tcgtagGAGATTCCAATCGTCATGCTTAATCCTGGCGGCATCCTCAACTG
GAAGTATCGgtaagccacgagtggagaagggagggcagaagggagggagg
gagggagggaaagagggaggctccgacaggcagggcgctagacctccctc
cctccacgtccacgtccctcagcacggacggatgcctttttgcccccacc
tgatttccgatgccactcctcctcgatgtgctggcacatcaccattcaag
gaatagaatttgggaccaacagtttttcggcaaccactatcgctcactcc
tccccttcctcctcctccctccttccctccctcgcctcctcctccctcct
tctctccctcgcagCGCCGAAACCTACCTTCGTGCGTCCTCCCTCCCCTA
TACCATCCTCCGACCCTGCGGCCTGGTTCCCGAGAAGGCATTTGGGGACG
AGCCTCCCACCGGTAAGCTGCAAGCAGGGCAAGGCGACGTCATTACGGGG
AGGTTGACGAGGCAGGACCTGGGCTCAGCAGTAGCCGCATCGCTGGCTTC
GCCGTTCTCGGTGGGCAAGACGTTGGAAATCAGGAGGGACGAGGCGGCCG
ATGCGAATTCCAAGGCAGGGGTAGGGAAGAGGGAGAGGACGACTGACATG
ACGGCCATTGAGCTCTTCCAACCACTGGTGAAAGACAAAGACCGCGCCGT
GAGCGGACAATTTAATCTGCTCCCATTCCCGGAGGCGGTGGATCCACCCG
CGCCGGTGAGTAAAGAGAGGGCCCAAGAGATTTTGAACGATCCGCGAGTG
AAGGCACAGCAGGAAAGGGACCGGGCTTTGGTGGCGGAGAAGGGAATGAA
GAAGGAGGAGGGGGGAGGGGGAAGGGTGGAGGAGGGAGAGTCACCTGCTG
TGTCGGTGGGTGCCGCGAAATAA
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protein sequence of NO11G03060.1

>NO11G03060.1-protein ID=NO11G03060.1-protein|Name=NO11G03060.1|organism=Nannochloropsis oceanica|type=polypeptide|length=677bp
MQSSSKSLRRSGLLLLFPCLFWGVVAFLPAPVLPTRDPSSSSSCLHAENN
NNKEPNPLSKLFTPPATTNPFASFGQQVTSFFEKLMSGGGLPPASSKALP
PPTPKPRRRTGGPVSVVFGATGRAGREIVQALLKEGHDVIAAVRNESKLN
DVFGSYALTGTTPAASGQGLLDYVTGVDVTNPATLMEGDVPDVLKEAAHV
VVALGPVGGLQPGGGFGFFPGLTSEDVDYKGVVKVVDAVAAAMGAGKKGG
KKVSMEEEEEKRQTLFRFETPEDVAKWQRLDDVIMGGRSSSTLQLNAEKG
YATYTGSLVVEDGGFCGTRASGAGVSVDLSGFDGVRLRVRGDGRRYKLNV
KTTDTLASENVYQAAFDTMDLEEGEGWQTITLPFHRFFPVVRNRVDYRGA
PLQSSSQVAVSFGLVYSRFEFNRQANPYYAPGAFALAMQELSLYRSQRPA
IVLVSSAGAERNAKVETEEDRKKEIPIVMLNPGGILNWKYRAETYLRASS
LPYTILRPCGLVPEKAFGDEPPTGKLQAGQGDVITGRLTRQDLGSAVAAS
LASPFSVGKTLEIRRDEAADANSKAGVGKRERTTDMTAIELFQPLVKDKD
RAVSGQFNLLPFPEAVDPPAPVSKERAQEILNDPRVKAQQERDRALVAEK
GMKKEEGGGGRVEEGESPAVSVGAAK*
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Synonyms
Publications