NO11G02410, NO11G02410 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G02410 vs. NCBI_GenBank
Match: EWM24969.1 (Proteasome, beta-type subunit, conserved site [Nannochloropsis gaditana]) HSP 1 Score: 500.4 bits (1287), Expect = 3.800e-138 Identity = 244/263 (92.78%), Postives = 250/263 (95.06%), Query Frame = 0 Query: 22 MTTHMKAQQPAAAPSIWSTEGAARLGQGVTMATSHDDGSIDHGVTQAPYERRFSPYDFNGGTCLAIAGKDFAVVAGDTRLSTGYEILSRNVPKLCKLTSKTVLASAGCLTDVRTLQQVLDMRLRMYEHDNGKEISTPAVAQLLGNTLYYRRFFPYYAFNVLAGVDDEGKGCVFSYDAVGSHERVEYSASGSGQAFVIPLLDNIVGFKNRQDSKPEYTAEQVVAICKDAFLTAGERDIYTGDAVMISVITSKGVTTETFHLKKD 285 MTTHMKAQQ PSIWSTEGAARLG G T+ TSHDDGSIDHGVTQAPYERRFSPYDFNGGTCLAIAGKDFAVVAGDTRLSTGYEILSRNVPKLCKLTSKTVLASAGCLTDVRTLQQVLDMRLRMYEHDNGKEISTPAVAQLLGNTLYYRRFFPYYAFNVLAGVDDEGKGCVFSYDAVGSHERVEYSASGSGQAFVIP++DNIVGFKNRQD KPEYTA +VAICKDAFLTAGERDIYTGDAV ISVIT+ GVTTETF LK+D Sbjct: 1 MTTHMKAQQSVPVPSIWSTEGAARLGSGATVTTSHDDGSIDHGVTQAPYERRFSPYDFNGGTCLAIAGKDFAVVAGDTRLSTGYEILSRNVPKLCKLTSKTVLASAGCLTDVRTLQQVLDMRLRMYEHDNGKEISTPAVAQLLGNTLYYRRFFPYYAFNVLAGVDDEGKGCVFSYDAVGSHERVEYSASGSGQAFVIPVMDNIVGFKNRQDPKPEYTAADIVAICKDAFLTAGERDIYTGDAVTISVITAAGVTTETFELKRD 263
BLAST of NO11G02410 vs. NCBI_GenBank
Match: XP_002286526.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED96167.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 327.4 bits (838), Expect = 4.400e-86 Identity = 155/228 (67.98%), Postives = 190/228 (83.33%), Query Frame = 0 Query: 57 DDGSIDHGVTQAPYERRFSPYDFNGGTCLAIAGKDFAVVAGDTRLSTGYEILSRNVPKLCKLTSKTVLASAGCLTDVRTLQQVLDMRLRMYEHDNGKEISTPAVAQLLGNTLYYRRFFPYYAFNVLAGVDDEGKGCVFSYDAVGSHERVEYSASGSGQAFVIPLLDNIVGFKNRQDSKPEYTAEQVVAICKDAFLTAGERDIYTGDAVMISVITSKGVTTETFHLKKD 285 D +IDHG+TQ+P+ERRFSPY+FNGGT LAI+G D+AVVA DTRLS+GYEILSRNV KL LT K VL SAGC TDV L+ VLD+++++Y H++ K ++TP+VAQ+LGNTLY +RFFPYY+FNVLAG+D EGKG V+SYDA+GS ER +SASGSGQAF+IPL+DN++ KNR D K E +E+VV I KDAFLTAGERDIYTGDAV I VIT+KG+ +ETF LK D Sbjct: 53 DGSNIDHGITQSPWERRFSPYEFNGGTTLAISGPDYAVVAADTRLSSGYEILSRNVSKLHPLTEKCVLGSAGCKTDVDQLRSVLDIKMKVYAHNHRKAMATPSVAQMLGNTLYMKRFFPYYSFNVLAGIDSEGKGAVYSYDAIGSFERTPFSASGSGQAFLIPLMDNVISHKNRLDQKRELGSEEVVEIVKDAFLTAGERDIYTGDAVEIMVITAKGIESETFKLKAD 280
BLAST of NO11G02410 vs. NCBI_GenBank
Match: EJK60845.1 (hypothetical protein THAOC_18741 [Thalassiosira oceanica]) HSP 1 Score: 325.5 bits (833), Expect = 1.700e-85 Identity = 162/262 (61.83%), Postives = 200/262 (76.34%), Query Frame = 0 Query: 37 IWSTEGAARL-----GQGVTMATSH---------DDGSIDHGVTQAPYERRFSPYDFNGGTCLAIAGKDFAVVAGDTRLSTGYEILSRNVPKLCKLTSKTVLASAGCLTDVRTLQQVLDMRLRMYEHDNGKEISTPAVAQLLGNTLYYRRFFPYYAFNVLAGVDDEGKGCVFSYDAVGSHERVEYSASGSGQAFVIPLLDNIVGFKNRQDSKPEYTAEQVVAICKDAFLTAGERDIYTGDAVMISVITSKGVTTETFHLKKD 285 I S+EG A + G +++A S D IDHGVTQAPYERRFSPY+FNGGT LAI+G D+AVVA DTRLS+GYEILSRNV KL LT + VL SAGC TDV L+ VLD+++++Y H++ K ++TP+VAQ+LGNTLYY+RFFPYY+FNVLAG+D EGKG V+SYDA+GS ER +SASGSGQ+F+IPL+DN++ KNR D + + AE+VV I KDAFLTAGERDIYTGDAV I VIT G+ +TF LK D Sbjct: 22 IHSSEGGASISVHFDGSNLSVAQSPHADPGSSAIDGSGIDHGVTQAPYERRFSPYEFNGGTTLAISGPDYAVVAADTRLSSGYEILSRNVSKLHPLTGRCVLGSAGCKTDVDQLRSVLDIKMKVYAHNHRKPMATPSVAQMLGNTLYYKRFFPYYSFNVLAGIDSEGKGAVYSYDAIGSFERTPFSASGSGQSFLIPLMDNVISHKNRLDERRDLPAEEVVEIVKDAFLTAGERDIYTGDAVDIMVITKDGIDKQTFQLKAD 283
BLAST of NO11G02410 vs. NCBI_GenBank
Match: OEU12303.1 (putative proteasome subunit beta type 1 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 320.1 bits (819), Expect = 7.000e-84 Identity = 149/226 (65.93%), Postives = 183/226 (80.97%), Query Frame = 0 Query: 59 GSIDHGVTQAPYERRFSPYDFNGGTCLAIAGKDFAVVAGDTRLSTGYEILSRNVPKLCKLTSKTVLASAGCLTDVRTLQQVLDMRLRMYEHDNGKEISTPAVAQLLGNTLYYRRFFPYYAFNVLAGVDDEGKGCVFSYDAVGSHERVEYSASGSGQAFVIPLLDNIVGFKNRQDSKPEYTAEQVVAICKDAFLTAGERDIYTGDAVMISVITSKGVTTETFHLKKD 285 G IDHGVT+ PYERRFSPYDFNGGTC+AIAG D+AV+A DTRLS+GYEILSRN+ KL L+ K +L SAGC TDV L+ VLD++++MY H++ K +STPAVAQ+LGNTLYY+RFFPYYAFNV G+D+EGKG V+SYDA+GS ER +A+GSGQA++IPLLDN++ +NR D K + E+VV I KDAFL+ GERDIYTGD V ISVIT G+ T F LK+D Sbjct: 44 GKIDHGVTENPYERRFSPYDFNGGTCVAIAGPDYAVIAADTRLSSGYEILSRNMSKLHPLSGKCILGSAGCKTDVDQLRSVLDIKMKMYLHNHRKTMSTPAVAQMLGNTLYYKRFFPYYAFNVFGGIDEEGKGAVYSYDAIGSFERTPVTATGSGQAYIIPLLDNVIAHRNRLDEKRDLPKEEVVEIVKDAFLSCGERDIYTGDQVEISVITKDGIETSFFALKRD 269
BLAST of NO11G02410 vs. NCBI_GenBank
Match: CBJ32569.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 314.3 bits (804), Expect = 3.900e-82 Identity = 156/254 (61.42%), Postives = 193/254 (75.98%), Query Frame = 0 Query: 31 PAAAPSIWSTEGAARLGQGVTMATSHDDGSIDHGVTQAPYERRFSPYDFNGGTCLAIAGKDFAVVAGDTRLSTGYEILSRNVPKLCKLTSKTVLASAGCLTDVRTLQQVLDMRLRMYEHDNGKEISTPAVAQLLGNTLYYRRFFPYYAFNVLAGVDDEGKGCVFSYDAVGSHERVEYSASGSGQAFVIPLLDNIVGFKNRQDSKPEYTAEQVVAICKDAFLTAGERDIYTGDAVMISVITSKGVTTETFHLKKD 285 P +AP IW +EG T IDHGVTQ P+ERR+SPYDFNGGT LAIAG D+ VVA DTR+STGY I+SR+ KL +LTSK V+ASAGC TDV TL + LD+ + MY+H+ KE++TPAVAQ+L NTLYYRRFFPYY+FNVL G+D++GKG VFSYDA+GS ERV YSASGSGQ ++IPLLDN+V FK R+D KP +A + V + K+ +TAGERDIYTGDAV I++I+ G +T+ F LKKD Sbjct: 7 PHSAP-IWHSEG--------TKDLQVLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRKDEKPARSAAETVELVKELLVTAGERDIYTGDAVEITIISKDGTSTQMFPLKKD 251
BLAST of NO11G02410 vs. NCBI_GenBank
Match: GAX27103.1 (20S proteasome subunit beta 6 [Fistulifera solaris]) HSP 1 Score: 290.8 bits (743), Expect = 4.600e-75 Identity = 141/236 (59.75%), Postives = 179/236 (75.85%), Query Frame = 0 Query: 49 GVTMATSHDDGSIDHGVTQAPYERRFSPYDFNGGTCLAIAGKDFAVVAGDTRLSTGYEILSRNVPKLCKLTSKTVLASAGCLTDVRTLQQVLDMRLRMYEHDNGKEISTPAVAQLLGNTLYYRRFFPYYAFNVLAGVDDEGKGCVFSYDAVGSHERVEYSASGSGQAFVIPLLDNIVGFKNRQDSKPEYTAEQVVAICKDAFLTAGERDIYTGDAVMISVITSKGVTTETFHLKKD 285 G MA++ + + T P E RFSPYDFNGGT A++G D+ VVA DTRLS+GYEI SRNV KL LT K +LASAGC TDV L+ VLD+R +MY++++ K ++TP+VAQ+L TLY +RFFPYYAFNVLAG+D +G G V+SYDA+GS ER +YSA+GSGQA+VIP LDN++G +NR + KP TA +VV + KDAFL+AGERDIYTGD V I V+T G+ T+TF LK D Sbjct: 2 GTLMASTEESSVV--ATTSLPIEHRFSPYDFNGGTVAAVSGPDYVVVAADTRLSSGYEIKSRNVTKLHALTDKCILASAGCKTDVDQLRSVLDIRGKMYQYNHRKPMNTPSVAQMLSVTLYGKRFFPYYAFNVLAGIDAQGVGAVYSYDAIGSFERTQYSAAGSGQAYVIPFLDNVIGNRNRLEEKPILTATEVVELLKDAFLSAGERDIYTGDQVEIMVVTRDGIQTQTFALKAD 235
BLAST of NO11G02410 vs. NCBI_GenBank
Match: GAX27561.1 (20S proteasome subunit beta 6 [Fistulifera solaris]) HSP 1 Score: 285.4 bits (729), Expect = 1.900e-73 Identity = 141/236 (59.75%), Postives = 179/236 (75.85%), Query Frame = 0 Query: 49 GVTMATSHDDGSIDHGVTQAPYERRFSPYDFNGGTCLAIAGKDFAVVAGDTRLSTGYEILSRNVPKLCKLTSKTVLASAGCLTDVRTLQQVLDMRLRMYEHDNGKEISTPAVAQLLGNTLYYRRFFPYYAFNVLAGVDDEGKGCVFSYDAVGSHERVEYSASGSGQAFVIPLLDNIVGFKNRQDSKPEYTAEQVVAICKDAFLTAGERDIYTGDAVMISVITSKGVTTETFHLKKD 285 G MA++ + S++ T P E RFSPYDFNGGT A+AG D+ VVA DTRLS+GYEI SR+V KL LT++ +LASAGC TDV L+ VLD+R +MY+H++ K + TP+VAQ+L TLY +RFFPYYAFNVLAG+D G G V+SYDA+GS ER YSA+GSGQA+VIP LDN++G +NR + KP A++VV + KDAFL+AGERDIYTGD V I V+T G+ T+TF LK D Sbjct: 2 GTLMAST--EASVE--ATSKPIEHRFSPYDFNGGTVAAVAGPDYVVVAADTRLSSGYEIKSRHVTKLHALTNQCILASAGCKTDVDQLRSVLDIRGKMYQHNHRKPMQTPSVAQMLSVTLYGKRFFPYYAFNVLAGMDAAGVGAVYSYDAIGSFERTGYSAAGSGQAYVIPFLDNVIGNRNRLEEKPVLAAQEVVELLKDAFLSAGERDIYTGDQVEIMVVTKDGIQTQTFALKAD 233
BLAST of NO11G02410 vs. NCBI_GenBank
Match: XP_005838338.1 (20S proteasome subunit beta type 1 [Guillardia theta CCMP2712] >EKX51358.1 20S proteasome subunit beta type 1 [Guillardia theta CCMP2712]) HSP 1 Score: 266.5 bits (680), Expect = 9.200e-68 Identity = 125/220 (56.82%), Postives = 163/220 (74.09%), Query Frame = 0 Query: 67 QAPYERRFSPYDFNGGTCLAIAGKDFAVVAGDTRLSTGYEILSRNVPKLCKLTSKTVLASAGCLTDVRTLQQVLDMRLRMYEHDNGKEISTPAVAQLLGNTLYYRRFFPYYAFNVLAGVDDEGKGCVFSYDAVGSHERVEYSASGSGQAFVIPLLDNIVGFKNRQDSKP--EYTAEQVVAICKDAFLTAGERDIYTGDAVMISVITSKGVTTETFHLKKD 285 + P E RFSPY NGGTCLA+AG DF ++A D+RLS GY ILSRN PK+ +LT+KT +AS+GC D+ TLQ+ L +++MY H +GKE+STPAVAQ+L TLY+RRFFPYY FN++ G+D G+GCVFSYDA+G ER++Y+ SGSG A + P LDN+V +KN D+KP E + ++ + + KD F +AGERDIYTGD V I +I G E F LKKD Sbjct: 12 EQPKESRFSPYQNNGGTCLALAGADFCIIAADSRLSLGYSILSRNTPKVAQLTTKTCIASSGCNADMVTLQKYLKFKIQMYLHQHGKEMSTPAVAQMLATTLYHRRFFPYYTFNIVGGLDQNGEGCVFSYDAIGCFERLKYTVSGSGHALIEPFLDNLVAYKN-TDNKPTIERSCDETLELVKDIFSSAGERDIYTGDFVDIYIIDKNGTRYEQFPLKKD 230
BLAST of NO11G02410 vs. NCBI_GenBank
Match: XP_022801844.1 (proteasome subunit beta type-1-B-like [Stylophora pistillata] >PFX18492.1 Proteasome subunit beta type-1-B [Stylophora pistillata]) HSP 1 Score: 264.6 bits (675), Expect = 3.500e-67 Identity = 127/220 (57.73%), Postives = 164/220 (74.55%), Query Frame = 0 Query: 66 TQAPYERRFSPYDFNGGTCLAIAGKDFAVVAGDTRLSTGYEILSRNVPKLCKLTSKTVLASAGCLTDVRTLQQVLDMRLRMYEHDNGKEISTPAVAQLLGNTLYYRRFFPYYAFNVLAGVDDEGKGCVFSYDAVGSHERVEYSASGSGQAFVIPLLDNIVGFKNRQD-SKPEYTAEQVVAICKDAFLTAGERDIYTGDAVMISVITSKGVTTETFHLKKD 285 T+ P+++ FSPY FNGGT LAIAG+DF+V+A DTRLS G+ I +R+ PK KLT+ TVL AG D TL +++ RL+MYEH++G ++S PA+AQ+L LYYRRFFPYY +N+LAG+D EGKGCVFS+D VGS+ER Y A GS A + PLLDN +GFKN+Q+ ++ T E+ V + KD F A ERDIYTGDAV+ISVIT GVT E F L++D Sbjct: 3 TERPFQQYFSPYAFNGGTVLAIAGEDFSVIASDTRLSQGFSIHTRDSPKTYKLTNSTVLGCAGFHGDCLTLTKLITARLQMYEHEHGSKMSCPAIAQMLSTVLYYRRFFPYYTYNILAGLDSEGKGCVFSFDPVGSYERETYRAGGSASALLQPLLDNQIGFKNQQEVTEVPLTKEKAVFLVKDVFTAAAERDIYTGDAVVISVITKDGVTQEAFPLRRD 222
BLAST of NO11G02410 vs. NCBI_GenBank
Match: XP_020625121.1 (proteasome subunit beta type-1-like [Orbicella faveolata]) HSP 1 Score: 260.8 bits (665), Expect = 5.100e-66 Identity = 125/220 (56.82%), Postives = 163/220 (74.09%), Query Frame = 0 Query: 66 TQAPYERRFSPYDFNGGTCLAIAGKDFAVVAGDTRLSTGYEILSRNVPKLCKLTSKTVLASAGCLTDVRTLQQVLDMRLRMYEHDNGKEISTPAVAQLLGNTLYYRRFFPYYAFNVLAGVDDEGKGCVFSYDAVGSHERVEYSASGSGQAFVIPLLDNIVGFKNRQD-SKPEYTAEQVVAICKDAFLTAGERDIYTGDAVMISVITSKGVTTETFHLKKD 285 T+ P ++ FSPY FNGGT LAIAG+DF+V+A DTRLS G+ I +R+ PK KLT+ TVL AG D TL +++ RL+MYEH++G ++S PA+AQ+L LYYRRFFPYY +N+LAG+D+EGKGCVFS+D VGS+ER Y A GS A + PLLDN +GFKN+Q ++ T ++ V + KD F A ERDIYTGDAV+ISV+T GVT E F L++D Sbjct: 3 TERPVQQYFSPYTFNGGTVLAIAGEDFSVIASDTRLSQGFAIHTRDSPKTYKLTNSTVLGCAGFHGDCLTLTKLITARLQMYEHEHGSKMSCPAIAQMLSTVLYYRRFFPYYTYNILAGLDNEGKGCVFSFDPVGSYERETYRAGGSASALLQPLLDNQIGFKNQQGATEVPLTKDKAVFLVKDVFTAAAERDIYTGDAVIISVVTKDGVTEEAFPLRRD 222 The following BLAST results are available for this feature:
BLAST of NO11G02410 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G02410 ID=NO11G02410|Name=NO11G02410|organism=Nannochloropsis oceanica|type=gene|length=1452bpback to top protein sequence of NO11G02410.1 >NO11G02410.1-protein ID=NO11G02410.1-protein|Name=NO11G02410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=285bpback to top Synonyms
Publications
|