NO11G02380, NO11G02380 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G02380 vs. NCBI_GenBank
Match: EWM24966.1 (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 263.1 bits (671), Expect = 2.000e-66 Identity = 167/410 (40.73%), Postives = 239/410 (58.29%), Query Frame = 0 Query: 26 PFNQIQWTIDEHENFLEGLKEFGRSWESISLHLVPTRTTEQVKNYAAHYFYKQAQEAASGAAKPAHVRIASTEDPEKKDNGHWTDEEHEFFLECWAKYGKSWKKISEVMKTRTNEQVRTHAQKYFAKLNQLRTCGYEGNYAMDGTRHLTKTFLKKAQRQGRISPGKLKTSFKMTSSRSVVKKRGNRQGKALARLQG--GSSTLRRVASQAGEGLGQDQAEAEK-------------EGEEKDGSLLQLAITSYTTRSGRVVTWAQPLQH---TLTQAQATAAMIGDKAEGRTIQEGEDDSKLKAAPMVIAAPVGLTMDTSASQEGEGEEVMNVFDHNYAEDQHDAKQEEQSERVKKVAEIDSAAEVVAVASTLPTPGTVADIMTSLTVDSLGFLHWDEAGSVSEGWTVLP 418 P WT +EH FLEGLK++GRSWESIS L+PTRT E++KNYA+ Y Q ++ + A + + GHWTDEEHEFFL+CWAKYGKSWKKIS+VMKTR+NEQ+RTHAQKYF KL+QLRTCGYEG+Y MDGTRHLTKTFLKKAQ +GR+ G ++ FK+ + R V K+ NR+ K LAR++G G S + G+ + EG D + + +++YTTRSGRVVT+++P QH T ++A+ A+G + E + ++A +V + G+T+DT G ++ D +H A +E E + +V V++++PTP T+ D++++ T+D GF W+ +G +G ++ P Sbjct: 77 PIASSDWTTEEHARFLEGLKQYGRSWESISTLLLPTRTPEEIKNYASLYLVNQPKDLT--PPRTASTKGKDGASAARAKEGHWTDEEHEFFLKCWAKYGKSWKKISQVMKTRSNEQIRTHAQKYFTKLDQLRTCGYEGSYTMDGTRHLTKTFLKKAQCEGRLESGSWRSRFKLKNPRGVAKRHANRRKKVLARIRGSSGRSPYGHRHWRYGDHVXXXXXXXXXXXXXXXXXXXXXLEGGH-DATSVCGTLSTYTTRSGRVVTFSRPSQHVQDTNSEAEENEER-SHTADGIYVGEMPTYTHDESALLVES---GMTIDTGVHTGRLGMAIVRDDD----VKEHHAPKEGYEE---------LSRDVSGVSASIPTPRTMVDVLSAFTMDPEGFPQWEYSGRREQGASLHP 466
BLAST of NO11G02380 vs. NCBI_GenBank
Match: EWM30605.1 (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 166.4 bits (420), Expect = 2.500e-37 Identity = 93/172 (54.07%), Postives = 111/172 (64.53%), Query Frame = 0 Query: 28 NQIQWTIDEHENFLEGLKEFGR-SWESISLHLVPTRTTEQVKNYAAHYFYKQA-QEAASGAA-KPAHVRI-----------ASTEDPEKKDNGHWTDEEHEFFLECWAKYGKSWKKISEVMKTRTNEQVRTHAQKYFAKLNQLRTCGYEGNYAMDGTRHLTKTFLKKAQRQG 186 NQ +WT EH+ FLEGL+E G+ +W+ IS +V TR+ EQV+ +A YF +Q+ QE AA K A I GHWTDEEHE FL CW +YGKSWKK+SE++ TRTNEQ+RTHAQKYFAKL +LR GYEG Y MDGTRHLTKTFL Q G Sbjct: 118 NQGRWTEAEHDLFLEGLREHGKGAWKLISEKVVRTRSAEQVRIHAQKYFLRQSKQEKKKNAANKGAMAEIEXXXXXXXXXXXXXXXXXXXKEGHWTDEEHELFLRCWEQYGKSWKKLSEIIGTRTNEQIRTHAQKYFAKLRELRERGYEGAYYMDGTRHLTKTFLGGTQPPG 289
BLAST of NO11G02380 vs. NCBI_GenBank
Match: CBJ26084.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 85.5 bits (210), Expect = 5.600e-13 Identity = 50/128 (39.06%), Postives = 70/128 (54.69%), Query Frame = 0 Query: 31 QWTIDEHENFLEGLKEFGRSWESISLHLVPTRTTEQVKNYAAHYF-----YKQAQEAASGAAKPAHVRIASTEDPEKKDN-GHWTDEEHEFFLECWAKYGKSWKKISEVMKTRTNEQVRTHAQKYFAK 153 +W DEH+ F+EG+K +GRSW ++ +V TRT QV +A H K + A + A R P N G W D+EHE F++ YG+SW ++ +M TRTNEQVR HA++Y K Sbjct: 172 EWEGDEHDRFMEGVKLYGRSWVDVA-SVVRTRTNRQVIMHAMHRLNDDLSSKPSLRACTSTGPQATDRAPPPAQPRAAVNGGDWGDDEHEAFMKGVKIYGRSWVSVARLMGTRTNEQVRAHAKQYLNK 298
BLAST of NO11G02380 vs. NCBI_GenBank
Match: XP_002184267.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44445.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 78.6 bits (192), Expect = 6.800e-11 Identity = 60/170 (35.29%), Postives = 88/170 (51.76%), Query Frame = 0 Query: 55 SLHLVPTRTTEQVKNYAAHYFYKQAQEAASGAAKPAHVRIASTEDPEKKDNGHWTDEEHEFFLECWAKYGKSWKKISEVMKTRTNEQVRTHAQKYFAKLNQLRTCGYEGNYAMDG-------TRHLTKTFLKKAQRQGRISPGKLKTSFKMTSSRSVVKKRGNRQGKALA 218 +L VP R + V AH ++++ ++ A ++++ ++ G WT EEH FL+ ++GK WKKI+ ++K+RT Q+RTHAQKYF KL + R G EG+ AM+G T T L K +RQ T K + +SVV RQGK LA Sbjct: 69 ALSEVPHRRSALVS--TAHSVTSKSKQNSTPPVDMATASGSASQGSHGENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVAMEGRGGVASITSVSTTAVLPKRRRQ--------TTGTKRKAIQSVVAS-AQRQGKKLA 227
BLAST of NO11G02380 vs. NCBI_GenBank
Match: XP_002184266.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44444.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 77.4 bits (189), Expect = 1.500e-10 Identity = 55/153 (35.95%), Postives = 81/153 (52.94%), Query Frame = 0 Query: 72 AHYFYKQAQEAASGAAKPAHVRIASTEDPEKKDNGHWTDEEHEFFLECWAKYGKSWKKISEVMKTRTNEQVRTHAQKYFAKLNQLRTCGYEGNYAMDG-------TRHLTKTFLKKAQRQGRISPGKLKTSFKMTSSRSVVKKRGNRQGKALA 218 AH ++++ ++ A ++++ ++ G WT EEH FL+ ++GK WKKI+ ++K+RT Q+RTHAQKYF KL + R G EG+ AM+G T T L K +RQ T K + +SVV RQGK LA Sbjct: 84 AHSVTSKSKQNSTPPVDMATASGSASQGSHGENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVAMEGRGGVASITSVSTTAVLPKRRRQ--------TTGTKRKAIQSVVAS-AQRQGKKLA 227
BLAST of NO11G02380 vs. NCBI_GenBank
Match: XP_004239479.1 (PREDICTED: transcription factor DIVARICATA-like [Solanum lycopersicum]) HSP 1 Score: 75.9 bits (185), Expect = 4.400e-10 Identity = 50/154 (32.47%), Postives = 76/154 (49.35%), Query Frame = 0 Query: 31 QWTIDEHENFLEGLKEFGR-SWESISLHLVPTRTTEQVKNYAAHYFYKQAQEAASGAAKPAHVRIAST-----EDP--------------------EKKDNGHWTDEEHEFFLECWAKYGKSWKKIS-EVMKTRTNEQVRTHAQKYFAKLNQLR 158 +W+ +EH FL GL++ G +W I+ VP+RT Q+ ++A YF Q A ++V ++S+ E P +K G WT+EEHE FL K G++W ++S E + +RT Q+ +HAQKYF L R Sbjct: 26 RWSEEEHRAFLCGLEKLGTGNWSEIAKQFVPSRTRTQISSHAQKYFAWQKTRNDKAAKSTSNVELSSSTSGKEERPLSPMPISYNDSNNGDSVNLLSRKQEGKWTEEEHEAFLIGMEKVGRNWTRVSKEFVLSRTPTQITSHAQKYFEGLRNDR 179
BLAST of NO11G02380 vs. NCBI_GenBank
Match: EWM29405.1 (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 75.9 bits (185), Expect = 4.400e-10 Identity = 46/116 (39.66%), Postives = 60/116 (51.72%), Query Frame = 0 Query: 60 PTRTTEQVKNYAAHYFYKQAQEAASGAAKPAHVRIASTEDPEKKDN------GHWTDEEHEFFLECWAKYGKSWKKISEVMKTRTNEQVRTHAQKYFAKLNQLRTCGYEGNYAMDG 170 P T Q+ + S AA P I ST P K+D+ G W +EEH FL+ YGKSWKKIS+++KTRT Q+RTHAQKY K+ + + G G M+G Sbjct: 111 PLLTVSQLSPNVTSSVCNASLSPMSPAAAP---DIPSTSPPSKRDSSPRDSPGRWNEEEHLLFLKGLEIYGKSWKKISQIVKTRTVVQIRTHAQKYLIKIEKAKKLGLTGTVMMNG 223
BLAST of NO11G02380 vs. NCBI_GenBank
Match: GAX24276.1 (protein MYSM1 [Fistulifera solaris]) HSP 1 Score: 75.1 bits (183), Expect = 7.500e-10 Identity = 50/136 (36.76%), Postives = 70/136 (51.47%), Query Frame = 0 Query: 82 AASGAAKPAHVRIASTEDPEKKDNGHWTDEEHEFFLECWAKYGKSWKKISEVMKTRTNEQVRTHAQKYFAKLNQLRTCGYEGNYAMDG-------TRHLTKTFLKKAQRQGRISPGKLKTSFKMTSSRSVVKKRGN 211 A GA A +A E + G WT EEH FL+ ++GK WKKI+ ++K+RT Q+RTHAQKYF KL + R G EG+ M+G T + T T +R+ I+ K K + +S K+ N Sbjct: 80 ATEGAPGQAAASLAPGE-----NTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDITMEGRGGNASITSNTTATAAMTNKRRRHITGTKRKVIQSVVASAQRQAKKAN 210
BLAST of NO11G02380 vs. NCBI_GenBank
Match: XP_015075285.1 (PREDICTED: transcription factor DIVARICATA-like [Solanum pennellii]) HSP 1 Score: 74.3 bits (181), Expect = 1.300e-9 Identity = 51/161 (31.68%), Postives = 76/161 (47.20%), Query Frame = 0 Query: 31 QWTIDEHENFLEGLKEFGR-SWESISLHLVPTRTTEQVKNYAAHYFYKQAQEAASGAAKPAHVRIAS---------TEDP-----------------------EKKDNGHWTDEEHEFFLECWAKYGKSWKKIS-EVMKTRTNEQVRTHAQKYFAKLNQLR 158 +W+ +EH FL GL+E G +W I+ VP+RT Q+ ++A YF Q + A ++V +S E P +K G WT+EEHE FL K G++W ++S E +++RT Q+ +HAQKYF L R Sbjct: 33 RWSEEEHRAFLCGLEELGTGNWSEIAKQFVPSRTRTQISSHAQKYFAWQKAKNDKAAKSTSNVDSSSPTSGKEDSNEERPLSPMPISYSVPNVSNNGDSVNLLSRKQEGKWTEEEHEAFLIGMEKVGRNWTRVSKEFVQSRTPTQITSHAQKYFESLRNNR 193
BLAST of NO11G02380 vs. NCBI_GenBank
Match: EWM30452.1 (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 73.6 bits (179), Expect = 2.200e-9 Identity = 38/87 (43.68%), Postives = 56/87 (64.37%), Query Frame = 0 Query: 102 KKDNGHWTDEEHEFFLECWAKYGKSWKKISEVMKTRTNEQVRTHAQKYFAKLNQLRTCGYEGN-YAMDGTRHLTKTFLKKAQRQGRI 188 +++ G WT EEH FL+ +GK WKKI++++KTRT Q+RTHAQKYF KL + + G+ G+ M+GTR K +R+G + Sbjct: 97 RENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDMLGMEGTRFGGKRVKFTGKRRGLV 183 The following BLAST results are available for this feature:
BLAST of NO11G02380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G02380 ID=NO11G02380|Name=NO11G02380|organism=Nannochloropsis oceanica|type=gene|length=2382bpback to top protein sequence of NO11G02380.1 >NO11G02380.1-protein ID=NO11G02380.1-protein|Name=NO11G02380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=547bpback to top Synonyms
Publications
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