NO11G01560, NO11G01560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G01560 vs. NCBI_GenBank
Match: XP_008880396.1 (hypothetical protein H310_14339 [Aphanomyces invadans] >ETV91007.1 hypothetical protein H310_14339 [Aphanomyces invadans]) HSP 1 Score: 107.5 bits (267), Expect = 1.300e-19 Identity = 112/420 (26.67%), Postives = 182/420 (43.33%), Query Frame = 0 Query: 32 IHLALAAWGFSSWILFNGLWGQLPLFIRTLPEGNKLGVLILAAEQLAYIFPLLFMYKKRRFNNSRR--SQEMDIWIVLLSGLAVSLLLSRYWHAQAVIDKHLHSIGLLSLAFLTGAVCSSTGVVFTPYLATLPKSYTSAHTAGAGLSGLAVALLTLAADAGSLHPRLSIERYFN------------------VLSLVFLGSCCAFYYVRTHINMEEMYEAIGHASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSLCDTQXXXXXXXXXXXXXXXXXXXXXXXXXXXGRATGESSRTKESYAAV-----FTLQCLLSALAYGMVPSILPLACSGYRDPSRTLMLSTVGFMCADPLGKLATSFLPTGRIFGLGLFTMAVAGWLLYCAVRSPKPPLSELPFGGWVVIVANSVF 427 ++ A +G SWI+ N ++ + + +PE + ++ A Q A IFP L+M FN+ ++ + IW++L G+ +LLS +W +V H HS LL+L F GAV ++T VV+ P+++T P +TSA + G GLSG+ ++ + D G+ RLS+ +F V+ VF + A++++ T + + H++ T+ XXXXXXXXXXXXXXX ES + Y Q +L A+++G++PSI+P S Y ++ L S+V M DP + TSF + L T+ V G ++ + + P S +GG + AN F Sbjct: 83 VYAAFIVFGLGSWIMTNSVFIETAALFQRVPEKAAISAYLIVALQGANIFPTLYMV----FNSDQQLFTIRTAIWVLLALGVLTCVLLSLFWDITSVFWGHEHSTALLALVFFGGAVSATTTVVYYPFVSTFPPVFTSALSTGEGLSGVVAGVIGIWQDPGATPMRLSVSTFFRWAGIDRSTTHAKRTSLACVVGGVFAVAMVAYWFLAT----SAIARDVQHSNYAEDPGAFECKFTPP--------------------------TTRSKSARSXXXXXXXXXXXXXXXPLVSPVAPHRFESPTHRRDYVLCKLWKPLLFQFVLCAMSFGVIPSIMPFLGSKYLSSAQVLKWSSVLSMACDPCARFLTSFYRWYNVTALSAMTLFV-GLVMVLSSTTADPIFSTYAYGGLAPVAANCSF 467
BLAST of NO11G01560 vs. NCBI_GenBank
Match: OQS06657.1 (ATP-binding Cassette (ABC) Superfamily [Thraustotheca clavata]) HSP 1 Score: 107.5 bits (267), Expect = 1.300e-19 Identity = 99/426 (23.24%), Postives = 169/426 (39.67%), Query Frame = 0 Query: 6 YHHAQCLVKMESSKTSCSAGGRDQRHIHLALAAWGFSSWILFNGLWGQLPLFIRTLPEGNKLGVLILAAEQLAYIFPLLFMYKKRRFNNSRR--SQEMDIWIVLLSGLAVSLLLSRYWHAQAVIDKHLHSIGLLSLAFLTGAVCSSTGVVFTPYLATLPKSYTSAHTAGAGLSGLAVALLTLAADAGSLHPRLSIERYFNVLSLVFLGSCCAFYYVRTHINMEEMYEAIGHASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSLCDTQXXXXXXXXXXXXXXXXXXXXXXXXXXXGRATGESSRTKESYAAVFTLQCLLSALAYGMVPSILPLACSGYRDPSRTLMLSTVGFMCADPLGKLATSFLPTGRIFGLGLFTMAVAGWLLYCAVRS--PKPPLSELPFGGWVVIVANSVFS 428 Y + + +M+SS R +LA +G SW++ + ++ + ++ PEG +G ++ A Q A IFPL +M FN+ ++ S IW +L+ G+ LLS +W + I HLHS L +L F GAV +++ VVF P+ A+ P +TSA G L + +L L D GS S+ F ++ FL S +F +R E++ D + + E + Q LL+ ++ ++PS+LP+ Y++ + ++V M DP + + F T R+ LFT A + L+ A+ + +P S+ GG +V+VAN ++ Sbjct: 340 YQWSGFVTQMKSSLDMSELKVHSSRKTYLAFVGFGLGSWVVSDFVFAEFAALMQKTPEGYSIGAYVIVALQSANIFPLFYML----FNSRQQYISIPTMIWGLLVLGITACTLLSIFWDYKTTIGGHLHSTALFALIFCGGAVSATSTVVFYPFAASYPVMFTSALATGESLGAVIAGILALIQDVGSSQMNFSVGIAFLCGAITFLISFVSFAILRRQRKAIELF-----------------------------------------------ADQELLLQ------------------------QPPMEHKAVLKVIWRPLLCQWLLAVFSFAVIPSVLPILGGKYKNSPAVMKWTSVLGMLCDPAARFLSGFYHTQRV---ELFTAAALFFALWIAIWASYSEPIWSQHNNGGIIVVVANCFYT 687
BLAST of NO11G01560 vs. NCBI_GenBank
Match: XP_008613034.1 (hypothetical protein SDRG_08911 [Saprolegnia diclina VS20] >EQC33394.1 hypothetical protein SDRG_08911 [Saprolegnia diclina VS20]) HSP 1 Score: 107.1 bits (266), Expect = 1.700e-19 Identity = 64/192 (33.33%), Postives = 102/192 (53.12%), Query Frame = 0 Query: 33 HLALAAWGFSSWILFNGLWGQLPLFIRTLPEGNKLGVLILAAEQLAYIFPLLFMYKKRRFNNSRRSQEMD--IWIVLLSGLAVSLLLSRYWHAQAVIDKHLHSIGLLSLAFLTGAVCSSTGVVFTPYLATLPKSYTSAHTAGAGLSGLAVALLTLAADAGSLHPRLSIERYFNVLSLVFLGSCCAFYYVRTH 223 ++A G SW++ + ++ ++ ++ PEG +GV ++AA Q A +FP+L+M FN+S++ + IW++L G+ LLL+ WH + + S LL F G V +++ VVF P+++ P TSA G L + L LA D GS SI YF ++VF+ S AF Y+RTH Sbjct: 22 YVAFLGLGLGSWVMSDFVFAEVAALVQHTPEGPAIGVYVIAALQSANVFPMLYML----FNSSQQRVSIPTMIWLLLAFGVMACLLLATTWHMTSSLFGEPRSSALLFFVFCGGIVSATSSVVFYPFVSMYPAISTSALATGESLGAVIAGFLALAQDVGSPEMYFSIGSYFACAAVVFVVSMAAFGYLRTH 209
BLAST of NO11G01560 vs. NCBI_GenBank
Match: XP_008880399.1 (hypothetical protein, variant 2 [Aphanomyces invadans] >ETV91009.1 hypothetical protein, variant 2 [Aphanomyces invadans]) HSP 1 Score: 105.9 bits (263), Expect = 3.800e-19 Identity = 103/369 (27.91%), Postives = 166/369 (44.99%), Query Frame = 0 Query: 32 IHLALAAWGFSSWILFNGLWGQLPLFIRTLPEGNKLGVLILAAEQLAYIFPLLFMYKKRRFNNSRR--SQEMDIWIVLLSGLAVSLLLSRYWHAQAVIDKHLHSIGLLSLAFLTGAVCSSTGVVFTPYLATLPKSYTSAHTAGAGLSGLAVALLTLAADAGSLHPRLSIERYFNVLSLVFLGSCCAFYYVRTHINMEEMYEAIGHASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSLCDTQXXXXXXXXXXXXXXXXXXXXXXXXXXXGRATGESSRTKESYAAV-----FTLQCLLSALAYGMVPSILPLACSGYRDPSRTLMLSTVGFMCADPLGKLATSFLPTGRIFGLGLFTMAV 394 ++ A +G SWI+ N ++ + + +PE + ++ A Q A IFP L+M FN+ ++ + IW++L G+ +LLS +W +V H HS LL+L F GAV ++T VV+ P+++T P +TSA + G GLSG+ ++ + D G+ RLS+ +F VF + A++++ T + + H++ T+ XXXXXXXXXXXXXXX ES + Y Q +L A+++G++PSI+P S Y ++ L S+V M DP + TSF + L T+ V Sbjct: 83 VYAAFIVFGLGSWIMTNSVFIETAALFQRVPEKAAISAYLIVALQGANIFPTLYMV----FNSDQQLFTIRTAIWVLLALGVLTCVLLSLFWDITSVFWGHEHSTALLALVFFGGAVSATTTVVYYPFVSTFPPVFTSALSTGEGLSGVVAGVIGIWQDPGATPMRLSVSTFFRWAGGVFAVAMVAYWFLAT----SAIARDVQHSNYAEDPGAFECKFTPP--------------------------TTRSKSARSXXXXXXXXXXXXXXXPLVSPVAPHRFESPTHRRDYVLCKLWKPLLFQFVLCAMSFGVIPSIMPFLGSKYLSSAQVLKWSSVLSMACDPCARFLTSFYRWYNVTALSAMTLFV 417
BLAST of NO11G01560 vs. NCBI_GenBank
Match: XP_008880402.1 (hypothetical protein, variant 5 [Aphanomyces invadans] >ETV91012.1 hypothetical protein, variant 5 [Aphanomyces invadans]) HSP 1 Score: 105.9 bits (263), Expect = 3.800e-19 Identity = 103/369 (27.91%), Postives = 166/369 (44.99%), Query Frame = 0 Query: 32 IHLALAAWGFSSWILFNGLWGQLPLFIRTLPEGNKLGVLILAAEQLAYIFPLLFMYKKRRFNNSRR--SQEMDIWIVLLSGLAVSLLLSRYWHAQAVIDKHLHSIGLLSLAFLTGAVCSSTGVVFTPYLATLPKSYTSAHTAGAGLSGLAVALLTLAADAGSLHPRLSIERYFNVLSLVFLGSCCAFYYVRTHINMEEMYEAIGHASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSLCDTQXXXXXXXXXXXXXXXXXXXXXXXXXXXGRATGESSRTKESYAAV-----FTLQCLLSALAYGMVPSILPLACSGYRDPSRTLMLSTVGFMCADPLGKLATSFLPTGRIFGLGLFTMAV 394 ++ A +G SWI+ N ++ + + +PE + ++ A Q A IFP L+M FN+ ++ + IW++L G+ +LLS +W +V H HS LL+L F GAV ++T VV+ P+++T P +TSA + G GLSG+ ++ + D G+ RLS+ +F VF + A++++ T + + H++ T+ XXXXXXXXXXXXXXX ES + Y Q +L A+++G++PSI+P S Y ++ L S+V M DP + TSF + L T+ V Sbjct: 83 VYAAFIVFGLGSWIMTNSVFIETAALFQRVPEKAAISAYLIVALQGANIFPTLYMV----FNSDQQLFTIRTAIWVLLALGVLTCVLLSLFWDITSVFWGHEHSTALLALVFFGGAVSATTTVVYYPFVSTFPPVFTSALSTGEGLSGVVAGVIGIWQDPGATPMRLSVSTFFRWAGGVFAVAMVAYWFLAT----SAIARDVQHSNYAEDPGAFECKFTPP--------------------------TTRSKSARSXXXXXXXXXXXXXXXPLVSPVAPHRFESPTHRRDYVLCKLWKPLLFQFVLCAMSFGVIPSIMPFLGSKYLSSAQVLKWSSVLSMACDPCARFLTSFYRWYNVTALSAMTLFV 417
BLAST of NO11G01560 vs. NCBI_GenBank
Match: XP_008880403.1 (hypothetical protein, variant 6 [Aphanomyces invadans] >ETV91013.1 hypothetical protein, variant 6 [Aphanomyces invadans]) HSP 1 Score: 105.9 bits (263), Expect = 3.800e-19 Identity = 103/369 (27.91%), Postives = 166/369 (44.99%), Query Frame = 0 Query: 32 IHLALAAWGFSSWILFNGLWGQLPLFIRTLPEGNKLGVLILAAEQLAYIFPLLFMYKKRRFNNSRR--SQEMDIWIVLLSGLAVSLLLSRYWHAQAVIDKHLHSIGLLSLAFLTGAVCSSTGVVFTPYLATLPKSYTSAHTAGAGLSGLAVALLTLAADAGSLHPRLSIERYFNVLSLVFLGSCCAFYYVRTHINMEEMYEAIGHASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSLCDTQXXXXXXXXXXXXXXXXXXXXXXXXXXXGRATGESSRTKESYAAV-----FTLQCLLSALAYGMVPSILPLACSGYRDPSRTLMLSTVGFMCADPLGKLATSFLPTGRIFGLGLFTMAV 394 ++ A +G SWI+ N ++ + + +PE + ++ A Q A IFP L+M FN+ ++ + IW++L G+ +LLS +W +V H HS LL+L F GAV ++T VV+ P+++T P +TSA + G GLSG+ ++ + D G+ RLS+ +F VF + A++++ T + + H++ T+ XXXXXXXXXXXXXXX ES + Y Q +L A+++G++PSI+P S Y ++ L S+V M DP + TSF + L T+ V Sbjct: 83 VYAAFIVFGLGSWIMTNSVFIETAALFQRVPEKAAISAYLIVALQGANIFPTLYMV----FNSDQQLFTIRTAIWVLLALGVLTCVLLSLFWDITSVFWGHEHSTALLALVFFGGAVSATTTVVYYPFVSTFPPVFTSALSTGEGLSGVVAGVIGIWQDPGATPMRLSVSTFFRWAGGVFAVAMVAYWFLAT----SAIARDVQHSNYAEDPGAFECKFTPP--------------------------TTRSKSARSXXXXXXXXXXXXXXXPLVSPVAPHRFESPTHRRDYVLCKLWKPLLFQFVLCAMSFGVIPSIMPFLGSKYLSSAQVLKWSSVLSMACDPCARFLTSFYRWYNVTALSAMTLFV 417
BLAST of NO11G01560 vs. NCBI_GenBank
Match: ODM96436.1 (Solute carrier family 52, riboflavin transporter, member 3-A [Orchesella cincta]) HSP 1 Score: 105.1 bits (261), Expect = 6.400e-19 Identity = 99/429 (23.08%), Postives = 168/429 (39.16%), Query Frame = 0 Query: 31 HIHLALAAWGFSSWILFNGLWGQLPLFIRTLPEGNKLGVLILAAEQLAYIFPLLFMYKKRRFNNSRRSQEMDIWIVLLSGLAVSLLLSRYWHAQAVIDKHLHSIGLLSLAFLTGAVCSSTGVVFTPYLATLPKSYTSAHTAGAGLSGLAVALLTLA-----------------ADAGSLHPRLSIERYFNVLSLVFLGSCCAFYYVRTHINMEEMYEAIGHASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSLCD--------TQXXXXXXXXXXXXXXXXXXXXXXXXXXXGRATGES---SRTKESYAAVFTLQCLLSALAYGMVPSILPLACSGYRDPSRTLMLSTVGFMCADPLGKLATSFLP---TGRIFGLGLFTMAVAGWLLYCAVRSPKPPLSELPFG------GWVVIVA 423 HI + +G +W+ NGLW +LPL ++ LPEG L + QLA + PLL+ F + + + I+ ++ GLA ++LL +W + HS LL L F +V S+ V + P++A + Y +++ G GLSG +++ LA DA + PR S++ +F +L + L S AFY + M + GS C T+ GR S +KE + + +Q L+ L+ G+ PSI +C Y + + L ++ A+P + F+P I + ++ ++G+++ AV SP PPL++ P G W+++VA Sbjct: 6 HIDILSVLFGLGTWLCVNGLWVELPLLVQKLPEGWNLPSYLSVVVQLANVGPLLYTMLNTYFPR-QVTDKRAIYFIMSIGLAATILLGLFWEKTTFVANSNHSTALLVLVFFLASVDCSSRVTYLPFMAKFNEIYLTSYFIGEGLSGFLPSIIALAQGVGGNPECRNNSFGNGTDAFTPDPRFSVDIFFYMLFVFTLISAVAFYCMNLDKVMSRAF-----------------VLSDTEVETKRPPTQGHNGDRSSISSSGSSCSRSIFEPPRTEPTGEGDLPDNNNDGNPTGRAILGLLDDGRNDESSLLVGMSKELFFYLLAMQALICMLSNGIFPSIQSYSCLPYGNVAYHLAVTLSNM--ANPAVCMLAFFIPPPNKSSITATAVLSLLISGYVMATAVLSPSPPLAQEPGGEVLLIFSWILLVA 414
BLAST of NO11G01560 vs. NCBI_GenBank
Match: PVD20319.1 (hypothetical protein C0Q70_18473 [Pomacea canaliculata]) HSP 1 Score: 102.8 bits (255), Expect = 3.200e-18 Identity = 71/236 (30.08%), Postives = 110/236 (46.61%), Query Frame = 0 Query: 11 CLVKMESSKTSCSAGGRDQRHIHLALAAWGFSSWILFNGLWGQLPLFIRTLPEGNKLGVLILAAEQLAYIFPLLFMYKKRRFNNSRRSQEMDIWIVLLSGLAVSLLLSRYWHAQAVIDKHLHSIGLLSLAFLTGAVCSSTGVVFTPYLATLPKSYTSAHTAGAGLSGLAVALLTLAADAGSLH------------------------------PRLSIERYFNVLSLVFLGSCCAF 217 CL K + G + L + + SSWI NGLW +LP+ ++ LPEG L + Q+A I PL + R R+ + I+I++++G A LLL +W A A + HS+GLLSL F V ++ V + P++ + Y +A G GLSGL ++++LA AG+L+ PR SI+ +F L ++ + SC AF Sbjct: 50 CLFKQRAMSQDLLQIGGTNLLVFLLVVLFAISSWIDINGLWVELPIMVQQLPEGWHLPSYMTVIIQVANIAPLAYTV-TRTVCPDRQVELPVIYIIIVTGAAACLLLPFFWDATAQVAGEQHSVGLLSLQFFLALVDCTSSVAYLPFMGSFKPQYLTAFYIGEGLSGLLPSMVSLAQGAGNLYCYNHTSYSNITIDGYTTVVPIFTSYPVYETPRFSIKIFFFFLFVMLVLSCIAF 284
BLAST of NO11G01560 vs. NCBI_GenBank
Match: XP_008910764.1 (hypothetical protein PPTG_15157 [Phytophthora parasitica INRA-310] >ETK79580.1 hypothetical protein L915_14577 [Phytophthora parasitica] >ETL32993.1 hypothetical protein L916_14490 [Phytophthora parasitica] >ETN03827.1 hypothetical protein PPTG_15157 [Phytophthora parasitica INRA-310] >ETP09296.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 102.1 bits (253), Expect = 5.400e-18 Identity = 64/191 (33.51%), Postives = 104/191 (54.45%), Query Frame = 0 Query: 34 LALAAWGFSSWILFNGLWGQLPLFIRTLPEGNKLGVLILAAEQLAYIFPLLFMYKKRRFNNSRR--SQEMDIWIVLLSGLAVSLLLSRYWHAQAVIDKHLHSIGLLSLAFLTGAVCSSTGVVFTPYLATLPKSYTSAHTAGAGLSGLAVALLTLAADAGSLHPRLSIERYFNVLSLVFLGSCCAFYYVRTH 223 +A +G +SWIL N + +L +F+R LPE + + A + A ++PLL+M FN ++ SQ IW +L+ G+ V++L+S W A I HS+ +L L G V +++ VVF P++A+ P +TSA G GLSG ALL + D G R S+ ++ + + + S AF +++ H Sbjct: 44 VAFVGFGLASWILTNVTYVELGVFLRELPEHYSIYAYSILALESANLYPLLYML----FNAQQQLLSQSTVIWWILVQGVVVAVLMSMLWGQTASIFGARHSVAMLVLTHFGGMVSTTSSVVFYPFVASFPPLFTSALATGEGLSGSLAALLGIVQDPGG-ELRFSVSVFYLICATIMCVSLVAFTFLQYH 229
BLAST of NO11G01560 vs. NCBI_GenBank
Match: XP_008910765.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETK79581.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL32994.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETN03828.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310]) HSP 1 Score: 102.1 bits (253), Expect = 5.400e-18 Identity = 64/191 (33.51%), Postives = 104/191 (54.45%), Query Frame = 0 Query: 34 LALAAWGFSSWILFNGLWGQLPLFIRTLPEGNKLGVLILAAEQLAYIFPLLFMYKKRRFNNSRR--SQEMDIWIVLLSGLAVSLLLSRYWHAQAVIDKHLHSIGLLSLAFLTGAVCSSTGVVFTPYLATLPKSYTSAHTAGAGLSGLAVALLTLAADAGSLHPRLSIERYFNVLSLVFLGSCCAFYYVRTH 223 +A +G +SWIL N + +L +F+R LPE + + A + A ++PLL+M FN ++ SQ IW +L+ G+ V++L+S W A I HS+ +L L G V +++ VVF P++A+ P +TSA G GLSG ALL + D G R S+ ++ + + + S AF +++ H Sbjct: 44 VAFVGFGLASWILTNVTYVELGVFLRELPEHYSIYAYSILALESANLYPLLYML----FNAQQQLLSQSTVIWWILVQGVVVAVLMSMLWGQTASIFGARHSVAMLVLTHFGGMVSTTSSVVFYPFVASFPPLFTSALATGEGLSGSLAALLGIVQDPGG-ELRFSVSVFYLICATIMCVSLVAFTFLQYH 229 The following BLAST results are available for this feature:
BLAST of NO11G01560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G01560 ID=NO11G01560|Name=NO11G01560|organism=Nannochloropsis oceanica|type=gene|length=2598bpback to top protein sequence of NO11G01560.2 >NO11G01560.2-protein ID=NO11G01560.2-protein|Name=NO11G01560.2|organism=Nannochloropsis oceanica|type=polypeptide|length=473bpback to top protein sequence of NO11G01560.1 >NO11G01560.1-protein ID=NO11G01560.1-protein|Name=NO11G01560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=515bpback to top Synonyms
Publications
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