NO11G01140, NO11G01140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G01140 vs. NCBI_GenBank
Match: XP_005856300.1 (F-type H+-transporting ATPase subunit beta, partial [Nannochloropsis gaditana CCMP526] >EKU20080.1 F-type H+-transporting ATPase subunit beta, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1213.4 bits (3138), Expect = 0.000e+0 Identity = 624/698 (89.40%), Postives = 649/698 (92.98%), Query Frame = 0 Query: 1 MAFAASRMLKRGLTSFRGAARASTPAAFSRRWMSQVAEAPVKDGRVLQVIGAVVDVEFDDKLPRVLNALEVEVEKGRPRLVLEVAQHIGERVVRTIAMDATEGLVRGQKVCDKGDAIQVPVGPGTLGRILNVIGEPIDEKGPIKAAAQWSIHRPAPLLTEQGESDAILSTGIKVIDLIGPYSKGGKIGLFGGAGVGKTVVIMELINNVAMNHGGFSVFAGVGERTREGNDLYHEMITSGVIKIDKATGSTDGSKAALVYGQMNEPPGARARVALTGLTIAEYFRDVEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERITSTLKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSSSRLMDPEYVSLDHYKTTRDTQKLLQDYKSLQDIIAILGMDELSEEDKLTVARARKAQRFMSQPFHVAEVFTGFSGKFVPLEESISGFAEILKGTYDDIPEQAFYMVGNIKDVQDKATKLAKSLEKNVKGSAAAAAAALQYSLGGQADLITKGMEQYGLKNDKSASQIQSDIEPFTVPPSLISGFDSVPGVGSESSEAEIKEKFTEAFNALTPEQKTEAKNYAKAFLSKDWKQFIDPEIEQSAAADKDEWPWAGPEELPEEYLKIDVPEDMMVEPPKEWWLVKHPKWVAKFGKDYAAKYTPANYR 699 MAFAASRMLKRGLTSF+G ARASTPAAFSRRWMS+ AEAPVKDGRVLQVIGAVVDVEFDDKLPRVLNALEV+VEKGRPRLVLEVAQHIGERVVRTIAMDATEGLVRGQ V D+GDAIQVPVGPGTLGRI+NVIGEPIDEKGPIKAAA WSIHRPAPLLTEQGESDAILSTGIKVIDLIGPYSKGGKIGLFGGAGVGKTVVIMELINNVAMNHGGFSVFAGVGERTREGNDLYHEM+TSGVIKIDK TGST+GSKAALVYGQMNEPPGARARVALTGLTIAEYFRDVEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMG LQERITSTLKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSSSRLMDPEYVS++HYKTTRDTQKLLQDYKSLQDIIAILGMDELSEEDKLTVARARKAQRFMSQPFHVAEVFTGFSGKFVPLEESISGF EIL+GTYDDIPEQAFYMVGNIKDVQ+KATKLAKSLEK LQYSLGGQAD+++KGMEQYG+KNDKSASQ+Q++IEPFTVPPSLISGFDSVPGVGSE SEAEIKEKFTEA+ ALTPEQ+ EAKNYAKAFLSKDWKQ+IDP +E SA+ADKDEWPWAGP+ LPE+YLK D WVAKFGKDYA KY PANYR Sbjct: 6 MAFAASRMLKRGLTSFKGIARASTPAAFSRRWMSEAAEAPVKDGRVLQVIGAVVDVEFDDKLPRVLNALEVQVEKGRPRLVLEVAQHIGERVVRTIAMDATEGLVRGQPVKDQGDAIQVPVGPGTLGRIVNVIGEPIDEKGPIKAAAHWSIHRPAPLLTEQGESDAILSTGIKVIDLIGPYSKGGKIGLFGGAGVGKTVVIMELINNVAMNHGGFSVFAGVGERTREGNDLYHEMMTSGVIKIDKNTGSTEGSKAALVYGQMNEPPGARARVALTGLTIAEYFRDVEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGTLQERITSTLKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSSSRLMDPEYVSMEHYKTTRDTQKLLQDYKSLQDIIAILGMDELSEEDKLTVARARKAQRFMSQPFHVAEVFTGFSGKFVPLEESISGFTEILRGTYDDIPEQAFYMVGNIKDVQEKATKLAKSLEKETXXXXXXXXXXLQYSLGGQADMLSKGMEQYGIKNDKSASQLQAEIEPFTVPPSLISGFDSVPGVGSELSEAEIKEKFTEAYKALTPEQQAEAKNYAKAFLSKDWKQYIDPSVEHSASADKDEWPWAGPDPLPEKYLKQDXXXXXXXXXXXXXXXXXXXXWVAKFGKDYAEKYVPANYR 703
BLAST of NO11G01140 vs. NCBI_GenBank
Match: EWM25142.1 (f-type h-atpase beta subunit [Nannochloropsis gaditana]) HSP 1 Score: 1159.1 bits (2997), Expect = 0.000e+0 Identity = 594/666 (89.19%), Postives = 618/666 (92.79%), Query Frame = 0 Query: 33 MSQVAEAPVKDGRVLQVIGAVVDVEFDDKLPRVLNALEVEVEKGRPRLVLEVAQHIGERVVRTIAMDATEGLVRGQKVCDKGDAIQVPVGPGTLGRILNVIGEPIDEKGPIKAAAQWSIHRPAPLLTEQGESDAILSTGIKVIDLIGPYSKGGKIGLFGGAGVGKTVVIMELINNVAMNHGGFSVFAGVGERTREGNDLYHEMITSGVIKIDKATGSTDGSKAALVYGQMNEPPGARARVALTGLTIAEYFRDVEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERITSTLKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSSSRLMDPEYVSLDHYKTTRDTQKLLQDYKSLQDIIAILGMDELSEEDKLTVARARKAQRFMSQPFHVAEVFTGFSGKFVPLEESISGFAEILKGTYDDIPEQAFYMVGNIKDVQDKATKLAKSLEKNVKGSAAAAAAALQYSLGGQADLITKGMEQYGLKNDKSASQIQSDIEPFTVPPSLISGFDSVPGVGSESSEAEIKEKFTEAFNALTPEQKTEAKNYAKAFLSKDWKQFIDPEIEQSAAADKDEWPWAGPEELPEEYLKIDVPEDMMVEPPKEWWLVKHPKWVAKFGKDYAAKYTPANYR 699 MS+ AEAPVKDGRVLQVIGAVVDVEFDDKLPRVLNALEV+VEKGRPRLVLEVAQHIGERVVRTIAMDATEGLVRGQ V D+GDAIQVPVGPGTLGRI+NVIGEPIDEKGPIKAAA WSIHRPAPLLTEQGESDAILSTGIKVIDLIGPYSKGGKIGLFGGAGVGKTVVIMELINNVAMNHGGFSVFAGVGERTREGNDLYHEM+TSGVIKIDK TGST+GSKAALVYGQMNEPPGARARVALTGLTIAEYFRDVEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMG LQERITSTLKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSSSRLMDPEYVS++HYKTTRDTQKLLQDYKSLQDIIAILGMDELSEEDKLTVARARKAQRFMSQPFHVAEVFTGFSGKFVPLEESISGF EIL+GTYDDIPEQAFYMVGNIKDVQ+KATKLAKSLEK LQYSLGGQAD+++KGMEQYG+KNDKSASQ+Q++IEPFTVPPSLISGFDSVPGVGSE SEAEIKEKFTEA+ ALTPEQ+ EAKNYAKAFLSKDWKQ+IDP +E SA+ADKDEWPWAGP+ LPE+YLK D WVAKFGKDYA KY PANYR Sbjct: 1 MSEAAEAPVKDGRVLQVIGAVVDVEFDDKLPRVLNALEVQVEKGRPRLVLEVAQHIGERVVRTIAMDATEGLVRGQPVKDQGDAIQVPVGPGTLGRIVNVIGEPIDEKGPIKAAAHWSIHRPAPLLTEQGESDAILSTGIKVIDLIGPYSKGGKIGLFGGAGVGKTVVIMELINNVAMNHGGFSVFAGVGERTREGNDLYHEMMTSGVIKIDKNTGSTEGSKAALVYGQMNEPPGARARVALTGLTIAEYFRDVEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGTLQERITSTLKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSSSRLMDPEYVSMEHYKTTRDTQKLLQDYKSLQDIIAILGMDELSEEDKLTVARARKAQRFMSQPFHVAEVFTGFSGKFVPLEESISGFTEILRGTYDDIPEQAFYMVGNIKDVQEKATKLAKSLEKETXXXXXXXXXXLQYSLGGQADMLSKGMEQYGIKNDKSASQLQAEIEPFTVPPSLISGFDSVPGVGSELSEAEIKEKFTEAYKALTPEQQAEAKNYAKAFLSKDWKQYIDPSVEHSASADKDEWPWAGPDPLPEKYLKQDXXXXXXXXXXXXXXXXXXXXWVAKFGKDYAEKYVPANYR 666
BLAST of NO11G01140 vs. NCBI_GenBank
Match: GAX25763.1 (F-type H+-transporting ATPase subunit beta [Fistulifera solaris] >GAX15371.1 F-type H+-transporting ATPase subunit beta [Fistulifera solaris]) HSP 1 Score: 745.7 bits (1924), Expect = 1.300e-211 Identity = 381/475 (80.21%), Postives = 422/475 (88.84%), Query Frame = 0 Query: 44 GRVLQVIGAVVDVEFDDKLPRVLNALEVEVEKGRPRLVLEVAQHIGERVVRTIAMDATEGLVRGQKVCDKGDAIQVPVGPGTLGRILNVIGEPIDEKGPI---KAAAQWS-IHRPAPLLTEQGESDAILSTGIKVIDLIGPYSKGGKIGLFGGAGVGKTVVIMELINNVAMNHGGFSVFAGVGERTREGNDLYHEMITSGVIKIDKATGSTDGSKAALVYGQMNEPPGARARVALTGLTIAEYFRDVEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERITSTLKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSSSRLMDPEYVSLDHYKTTRDTQKLLQDYKSLQDIIAILGMDELSEEDKLTVARARKAQRFMSQPFHVAEVFTGFSGKFVPLEESISGFAEILKGTYDDIPEQAFYMVGNIKDVQDKATKLA 515 G+V QVIGAVVDV+FDDKLP++LNALEVEV KG RLVLEVAQH+GE VRTIAM++T+GLVRGQK D G IQVPVGP TLGRI+NVIGEP+DEKGPI KA+ +++ +HR AP EQG + IL TGIKV+DL+ PY+KGGKIGLFGGAGVGKTVVIMELINN+AMNHGG+SVFAGVGERTREGNDLY+EMI GVIKID+ TGST GSKAALVYGQMNEPPGARARVALTGL IAEYFRD EGQDVLLFVDNIFRFTQAG+EVSALLGRIPSAVGYQPTLATDMGALQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR IAELGIYPAVDPLDS+SR++DP + HY R TQKLLQDYK LQDIIAILGMDELSE+DKLTVARARK Q+FMSQPFHVAEVFTG +GKFV LE++I+GF+EI+ G YD +PE AFYMVGNI+DV+ KA+ +A Sbjct: 25 GKVTQVIGAVVDVQFDDKLPKILNALEVEVPKGSERLVLEVAQHLGENTVRTIAMESTDGLVRGQKCVDTGAPIQVPVGPDTLGRIINVIGEPVDEKGPIFKDKASEKFAPLHRSAPTFNEQGRTQDILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIAMNHGGYSVFAGVGERTREGNDLYYEMIEGGVIKIDEKTGSTAGSKAALVYGQMNEPPGARARVALTGLAIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITSTGKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSTSRMLDPRVIGQRHYDVARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQKFMSQPFHVAEVFTGTAGKFVSLEDTINGFSEIISGAYDSLPEGAFYMVGNIEDVKAKASTMA 499
BLAST of NO11G01140 vs. NCBI_GenBank
Match: XP_002177917.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50731.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 744.6 bits (1921), Expect = 2.800e-211 Identity = 380/475 (80.00%), Postives = 423/475 (89.05%), Query Frame = 0 Query: 44 GRVLQVIGAVVDVEFDDKLPRVLNALEVEVEKGRPRLVLEVAQHIGERVVRTIAMDATEGLVRGQKVCDKGDAIQVPVGPGTLGRILNVIGEPIDEKGPI---KAAAQWS-IHRPAPLLTEQGESDAILSTGIKVIDLIGPYSKGGKIGLFGGAGVGKTVVIMELINNVAMNHGGFSVFAGVGERTREGNDLYHEMITSGVIKIDKATGSTDGSKAALVYGQMNEPPGARARVALTGLTIAEYFRDVEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERITSTLKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSSSRLMDPEYVSLDHYKTTRDTQKLLQDYKSLQDIIAILGMDELSEEDKLTVARARKAQRFMSQPFHVAEVFTGFSGKFVPLEESISGFAEILKGTYDDIPEQAFYMVGNIKDVQDKATKLA 515 G+V QVIGAVVDV+FD+KLP++LNALEVEV G RLVLEVAQH+GE VRTIAM++T+GLVRGQK D G IQVPVGP TLGRI+NVIGEP+DEKGPI K A +++ +HR AP TEQG S IL TGIKV+DL+ PY+KGGKIGLFGGAGVGKTVVIMELINN+AMNHGG+SVFAGVGERTREGNDLY+EMI GVIKID+ TGST GSKAALVYGQMNEPPGARARVALTGL IAEYFRD EGQDVLLFVDNIFRFTQAG+EVSALLGRIPSAVGYQPTLATDMGALQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR IAELGIYPAVDPLDS+SR++DP + HY R TQKLLQDYKSLQDIIAILGMDELSE+DKLTV+RARK Q+FMSQPFHVAEVFTG +GKFV LE++I GF++I+ G YDD+PE AFYMVG+I+DV++KA ++A Sbjct: 26 GKVTQVIGAVVDVQFDEKLPKILNALEVEVVAGAERLVLEVAQHLGENTVRTIAMESTDGLVRGQKCVDTGAPIQVPVGPDTLGRIINVIGEPVDEKGPIFLSKEAEKYAPLHRAAPTFTEQGRSQDILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIAMNHGGYSVFAGVGERTREGNDLYYEMIEGGVIKIDEKTGSTAGSKAALVYGQMNEPPGARARVALTGLAIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGALQERITSTGKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSTSRMLDPRVIGQRHYDVARSTQKLLQDYKSLQDIIAILGMDELSEDDKLTVSRARKVQKFMSQPFHVAEVFTGTAGKFVSLEKTIDGFSQIINGDYDDLPEGAFYMVGDIEDVKEKAGQMA 500
BLAST of NO11G01140 vs. NCBI_GenBank
Match: OEU20740.1 (F-type H-ATPase beta subunit [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 741.9 bits (1914), Expect = 1.800e-210 Identity = 385/499 (77.15%), Postives = 424/499 (84.97%), Query Frame = 0 Query: 19 AARASTPAAFSRRWMSQVAEAPVKDGRVLQVIGAVVDVEFDDKLPRVLNALEVEVEKGRPRLVLEVAQHIGERVVRTIAMDATEGLVRGQKVCDKGDAIQVPVGPGTLGRILNVIGEPIDEKGPI----KAAAQWSIHRPAPLLTEQGESDAILSTGIKVIDLIGPYSKGGKIGLFGGAGVGKTVVIMELINNVAMNHGGFSVFAGVGERTREGNDLYHEMITSGVIKIDKATGSTDGSKAALVYGQMNEPPGARARVALTGLTIAEYFRDVEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERITSTLKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSSSRLMDPEYVSLDHYKTTRDTQKLLQDYKSLQDIIAILGMDELSEEDKLTVARARKAQRFMSQPFHVAEVFTGFSGKFVPLEESISGFAEILKGTYDDIPEQAFYMVGNIKDVQDKATKL 514 AAR A R + S A A + G+V VIGAVVDV+F DKLP++LNALEVEV +G RLVLEVAQH+GE VRTIAM++T+GLVRGQK D G IQVPVGP TLGRI+NVIGEP+DEKGPI K A +HR AP TEQG S IL TGIKV+DL+ PY+KGGKIGLFGGAGVGKTVVIMELINN+AMNHGG+SVFAGVGERTREGNDLYHEMI GVIKID+A+GST+GSKAALVYGQMNEPPGARARVALTGL IAEYFRD EGQDVLLFVDNIFRFTQAG+EVSALLGRIPSAVGYQPTLATDMG LQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR IAELGIYPAVDPLDS+SR++DP + +HY+ R TQKLLQDYK LQDIIAILGMDELSE+DKLTV+RARK +FMSQPFHVAEVFTG +GKFV LE+SI GF EI+ G YD +PE AFYMVG I DV++KA + Sbjct: 3 AARRFAQQAGIRTYSSTTA-AALNTGKVTTVIGAVVDVQFPDKLPKILNALEVEVAEGNERLVLEVAQHLGENTVRTIAMESTDGLVRGQKCVDSGAPIQVPVGPLTLGRIINVIGEPVDEKGPIFPDKKIAKYAPLHRSAPTFTEQGRSQDILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIAMNHGGYSVFAGVGERTREGNDLYHEMIEGGVIKIDEASGSTEGSKAALVYGQMNEPPGARARVALTGLAIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGGLQERITSTGKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRSIAELGIYPAVDPLDSTSRMLDPRVIGNEHYEVARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVSRARKVMKFMSQPFHVAEVFTGTAGKFVSLEDSIKGFKEIISGDYDHLPELAFYMVGGIDDVKEKAANM 500
BLAST of NO11G01140 vs. NCBI_GenBank
Match: XP_002296041.1 (F-type H-ATPase beta subunit [Thalassiosira pseudonana CCMP1335] >ACI64758.1 F-type H-ATPase beta subunit [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 730.3 bits (1884), Expect = 5.500e-207 Identity = 378/488 (77.46%), Postives = 416/488 (85.25%), Query Frame = 0 Query: 31 RWMSQVAEAPVKDGRVLQVIGAVVDVEFDDKLPRVLNALEVEVEKGRPRLVLEVAQHIGERVVRTIAMDATEGLVRGQKVCDKGDAIQVPVGPGTLGRILNVIGEPIDEKGPI----KAAAQWSIHRPAPLLTEQGESDAILSTGIKVIDLIGPYSKGGKIGLFGGAGVGKTVVIMELINNVAMNHGGFSVFAGVGERTREGNDLYHEMITSGVIKIDKATGSTDGSKAALVYGQMNEPPGARARVALTGLTIAEYFRDVEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERITSTLKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSSSRLMDPEYVSLDHYKTTRDTQKLLQDYKSLQDIIAILGMDELSEEDKLTVARARKAQRFMSQPFHVAEVFTGFSGKFVPLEESISGFAEILKGTYDDIPEQAFYMVGNIKDVQDKATKLA 515 R S A GRV QVIGAVVDV+FD+KLP++LNALEVE RLVLEVAQH+GE VRTIAM++T+GLVRGQK D G IQVPVGP TLGRI+NVIGEP+DEKGPI K +HR AP TEQG+S IL TGIKV+DL+ PY+KGGKIGLFGGAGVGKTVVIMELINN+AMNHGG+SVFAGVGERTREGNDLYHEMI GVIKI+K TGST+GSKAALVYGQMNEPPGARARVALTGL IAEYFRD EGQDVLLFVDNIFRFTQAG+EVSALLGRIPSAVGYQPTLATDMG LQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR IAELGIYPAVDPLDS+SR++DP + HY+ R TQKLLQDYK LQDIIAILGMDELSE+DKL V+RARK Q+FMSQPFHVAEVFTG +GKFV LE++I GF EI+ G +DD+PE AFYMVG+I +V+ KA +A Sbjct: 14 RAFSGSAAVSASVGRVTQVIGAVVDVQFDEKLPKILNALEVETT--GDRLVLEVAQHLGENTVRTIAMESTDGLVRGQKCTDTGAPIQVPVGPETLGRIINVIGEPVDEKGPIFTDKKMEKFAPLHRSAPTFTEQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIAMNHGGYSVFAGVGERTREGNDLYHEMIEGGVIKINKDTGSTEGSKAALVYGQMNEPPGARARVALTGLAIAEYFRDEEGQDVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGGLQERITSTAKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRMLDPRVIGDKHYQVARATQKLLQDYKGLQDIIAILGMDELSEDDKLVVSRARKVQKFMSQPFHVAEVFTGTAGKFVSLEDTIKGFEEIINGEHDDLPEGAFYMVGDINEVKSKAATMA 499
BLAST of NO11G01140 vs. NCBI_GenBank
Match: CBJ32298.1 (F-type H-ATPase beta subunit [Ectocarpus siliculosus]) HSP 1 Score: 714.1 bits (1842), Expect = 4.100e-202 Identity = 384/516 (74.42%), Postives = 421/516 (81.59%), Query Frame = 0 Query: 1 MAFAASRMLKRGLTSFRGAARASTPAAFSRRWMSQVAEAPVKDGRVLQVIGAVVDVEFDDKLPRVLNALEVEVEKGRPRLVLEVAQHIGERVVRTIAMDATEGLVRGQKVCDKGDAIQVPVGPGTLGRILNVIGEPIDEKGPIKAAAQWSIHRPAPLLTEQGESDAILSTGIKVIDLIGPYSKGGKIGLFGGAGVGKTVVIMELINNVAMNHGGFSVFAGVGERTREGNDLYHEMITSGVIKIDKATGSTDGSKAALVYGQMNEPPGARARVALTGLTIAEYFRDVEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERITSTLKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSSSRLMDPEYVSLDHYKTTRDTQKLLQDYKSLQDIIAILGMDELSEEDKLTVARARKAQRFMSQPFHVAEVFTGFSGKFVPLEESISGFAEILKGTYDDIPEQAFYMVGNIKDVQDKATKLAKS 517 MA + + KR L + A R+S A S +A+A GRV QVIGAVVDV+FD LP + NALEV V G RLVLEVAQH+GE VRTIAM+ATEGL RGQ D G I VPVG TLGRI+NVIGEP+DE+GPI + A+ IH AP EQG+S IL TGIKV+DL+ PY+KGGKIGLFGGAGVGKTVVIMELINN+A NHGGFSVFAGVGERTREGNDLYHEMI GVIKI + ST GSKA LVYGQMNEPPGARARVALTGLTIAEYFRD EGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMG LQERITST KGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSR+IAELGIYPAVDPLDS+SR++DP + +HY+T R TQKLLQDYK LQ+IIAILGMDELSE+DKLTVARARK QRFMSQPF VAEVFTG G FV LE++I GF EIL G +DD+PE AFYMVG+I V KA +LA+S Sbjct: 1 MALRLATVAKRALAAPVAAGRSSFHA-------SALAQAG-SVGRVTQVIGAVVDVQFDKDLPPIFNALEVNVADGASRLVLEVAQHLGENTVRTIAMEATEGLTRGQGCTDTGAPIMVPVGQETLGRIMNVIGEPVDERGPINSKAKAPIHNSAPTFEEQGKSQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNIATNHGGFSVFAGVGERTREGNDLYHEMIEGGVIKITE--DSTKGSKATLVYGQMNEPPGARARVALTGLTIAEYFRDAEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGMLQERITSTNKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRQIAELGIYPAVDPLDSTSRMLDPRVIGDEHYETARATQKLLQDYKGLQEIIAILGMDELSEDDKLTVARARKVQRFMSQPFTVAEVFTGTKGVFVSLEDTIKGFQEILSGAHDDLPEGAFYMVGDIASVGVKAKQLAES 506
BLAST of NO11G01140 vs. NCBI_GenBank
Match: OQS02009.1 (F-type H-ATPase beta subunit [Thraustotheca clavata]) HSP 1 Score: 713.8 bits (1841), Expect = 5.300e-202 Identity = 364/493 (73.83%), Postives = 416/493 (84.38%), Query Frame = 0 Query: 27 AFSRRWMSQVAEAPVKDGRVLQVIGAVVDVEFDDKLPRVLNALEVEVEKGRPRLVLEVAQHIGERVVRTIAMDATEGLVRGQKVCDKGDAIQVPVGPGTLGRILNVIGEPIDEKGPIKAAAQWSIHRPAPLLTEQGESDAILSTGIKVIDLIGPYSKGGKIGLFGGAGVGKTVVIMELINNVAMNHGGFSVFAGVGERTREGNDLYHEMITSGVIKIDKATGSTDGSKAALVYGQMNEPPGARARVALTGLTIAEYFRDVEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERITSTLKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSSSRLMDPEYVSLDHYKTTRDTQKLLQDYKSLQDIIAILGMDELSEEDKLTVARARKAQRFMSQPFHVAEVFTGFSGKFVPLEESISGFAEILKGTYDDIPEQAFYMVGNIKDVQDKATKLAKSLEK 520 + SR A + GR+ Q+IGAVVDV+F + LP +LNALEV+ R+VLEVAQH+GE VRTIAM+ T+GLVRGQ+ D G+ I VPVGP TLGRI+NVIGEP+DE+GPI +A + IH APL TEQG +L TG+KV+DL+ PY+KGGKIGLFGGAGVGKTVVIMELINNVA NHGG SVFAGVGERTREGNDLYHEMI SGVIK++ A G+T GSKAALVYGQMNEPPGARARV LTGLT+AEYFRDVEGQDVLLFVDNIFRFTQA +EVSALLGRIPSAVGYQPTLATD+GALQERITSTLKGSITSVQA+YVPADDLTDPAPATTF+HLDATTVLSR+I+ELGIYPAVDPLDS SR++DP + +HY+ R TQKLLQDYK LQDIIAILGMDELSE+DKLTVARARK Q+FMSQP HVAEVFTG GKFV L E++S F IL G YDD+PE AF+MVG I++V++KA +LA L++ Sbjct: 3 SLSRSLKRGFASSGASVGRITQIIGAVVDVQFTNNLPPILNALEVQNTNDNVRIVLEVAQHLGENTVRTIAMEGTDGLVRGQECVDTGNPIMVPVGPETLGRIMNVIGEPVDERGPINSATKAPIHCAAPLYTEQGSGAEVLVTGLKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNVANNHGGVSVFAGVGERTREGNDLYHEMIESGVIKLN-ADGTTTGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDVEGQDVLLFVDNIFRFTQACSEVSALLGRIPSAVGYQPTLATDLGALQERITSTLKGSITSVQAIYVPADDLTDPAPATTFSHLDATTVLSRQISELGIYPAVDPLDSKSRMLDPRVIGDEHYEVARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQKFMSQPLHVAEVFTGKPGKFVALAETVSSFKAILAGEYDDLPEAAFFMVGGIEEVKEKAKQLASELDE 494
BLAST of NO11G01140 vs. NCBI_GenBank
Match: XP_008865287.1 (ATP synthase subunit beta, mitochondrial, partial [Aphanomyces invadans] >XP_008881485.1 ATP synthase subunit beta, mitochondrial [Aphanomyces invadans] >ETV89883.1 ATP synthase subunit beta, mitochondrial [Aphanomyces invadans] >ETW05510.1 ATP synthase subunit beta, mitochondrial, partial [Aphanomyces invadans]) HSP 1 Score: 713.0 bits (1839), Expect = 9.100e-202 Identity = 362/475 (76.21%), Postives = 409/475 (86.11%), Query Frame = 0 Query: 44 GRVLQVIGAVVDVEFDDKLPRVLNALEVEVEKGRPRLVLEVAQHIGERVVRTIAMDATEGLVRGQKVCDKGDAIQVPVGPGTLGRILNVIGEPIDEKGPIKAAAQWSIHRPAPLLTEQGESDAILSTGIKVIDLIGPYSKGGKIGLFGGAGVGKTVVIMELINNVAMNHGGFSVFAGVGERTREGNDLYHEMITSGVIKIDKATGSTDGSKAALVYGQMNEPPGARARVALTGLTIAEYFRDVEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERITSTLKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSSSRLMDPEYVSLDHYKTTRDTQKLLQDYKSLQDIIAILGMDELSEEDKLTVARARKAQRFMSQPFHVAEVFTGFSGKFVPLEESISGFAEILKGTYDDIPEQAFYMVGNIKDVQDKATKLAKSLE 519 GR+ Q+IGAVVDV+F + LP +LNALEV+ R+VLEVAQH+GE VRTIAM+ T+GLVRGQ+ D G+ I VPVGP TLGRI+NVIGEP+DE+GPI + + IH APL TEQG +L TG+KV+DL+ PY+KGGKIGLFGGAGVGKTVVIMELINNVA NHGG SVFAGVGERTREGNDLYHEMI SGVIK++ A G+T GSKAALVYGQMNEPPGARARV LTGLT+AEYFRDVEGQDVLLFVDNIFRFTQA +EVSALLGRIPSAVGYQPTLATD+GALQERITSTLKGSITSVQA+YVPADDLTDPAPATTF+HLDATTVLSR+I+ELGIYPAVDPLDS SR++DP + +HY+ R TQKLLQDYK LQDIIAILGMDELSE+DKLTVARARK Q+FMSQP HVAEVFTG GKFV LEE++S F IL G YDD+PE AF+MVG I++V++KA LA LE Sbjct: 18 GRITQIIGAVVDVQFTNNLPPILNALEVQNTNDNVRIVLEVAQHLGENTVRTIAMEGTDGLVRGQECVDTGNPIMVPVGPETLGRIMNVIGEPVDERGPITSVHKAPIHCAAPLYTEQGSGAEVLVTGLKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNVANNHGGVSVFAGVGERTREGNDLYHEMIESGVIKLN-ADGTTTGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDVEGQDVLLFVDNIFRFTQACSEVSALLGRIPSAVGYQPTLATDLGALQERITSTLKGSITSVQAIYVPADDLTDPAPATTFSHLDATTVLSRQISELGIYPAVDPLDSKSRMLDPRVIGEEHYEVARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQKFMSQPLHVAEVFTGKPGKFVRLEETVSSFKAILAGEYDDLPEAAFFMVGGIEEVKEKAKALAAELE 491
BLAST of NO11G01140 vs. NCBI_GenBank
Match: XP_008908505.1 (ATP synthase subunit beta, mitochondrial [Phytophthora parasitica INRA-310] >ETI42669.1 ATP synthase subunit beta, mitochondrial [Phytophthora parasitica P1569] >ETK82695.1 ATP synthase subunit beta, mitochondrial [Phytophthora parasitica] >ETL36073.1 ATP synthase subunit beta, mitochondrial [Phytophthora parasitica] >ETL89310.1 ATP synthase subunit beta, mitochondrial [Phytophthora parasitica] >ETM42579.1 ATP synthase subunit beta, mitochondrial [Phytophthora parasitica] >ETN06003.1 ATP synthase subunit beta, mitochondrial [Phytophthora parasitica INRA-310] >ETO71293.1 ATP synthase subunit beta, mitochondrial [Phytophthora parasitica P1976] >ETP12405.1 ATP synthase subunit beta, mitochondrial [Phytophthora parasitica CJ01A1] >ETP40524.1 ATP synthase subunit beta, mitochondrial [Phytophthora parasitica P10297] >KUF89839.1 ATP synthase subunit beta [Phytophthora nicotianae]) HSP 1 Score: 712.6 bits (1838), Expect = 1.200e-201 Identity = 372/513 (72.51%), Postives = 426/513 (83.04%), Query Frame = 0 Query: 8 MLKR-GLTSFRGAARASTPAAFSRRWMSQVAEAPVKDGRVLQVIGAVVDVEFDDKLPRVLNALEVEVEKGRPRLVLEVAQHIGERVVRTIAMDATEGLVRGQKVCDKGDAIQVPVGPGTLGRILNVIGEPIDEKGPIKAAAQWSIHRPAPLLTEQGESDAILSTGIKVIDLIGPYSKGGKIGLFGGAGVGKTVVIMELINNVAMNHGGFSVFAGVGERTREGNDLYHEMITSGVIKIDKATGSTDGSKAALVYGQMNEPPGARARVALTGLTIAEYFRDVEGQDVLLFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERITSTLKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSSSRLMDPEYVSLDHYKTTRDTQKLLQDYKSLQDIIAILGMDELSEEDKLTVARARKAQRFMSQPFHVAEVFTGFSGKFVPLEESISGFAEILKGTYDDIPEQAFYMVGNIKDVQDKATKLAKSLEK 520 ML R GLT+ RGA +T A +A G++ Q+IGAVVDV+F D LP +LNALE++ + R+VLEVAQH+GE VRTIAM+ T+GLVRGQ+ D G+ I VPVGP TLGRI+NVIGE +DE+GPI A IH APLLTEQG IL TG+KV+DL+ PY+KGGKIGLFGGAGVGKTVVIMELINNVA NHGG SVFAGVGERTREGNDLY+EMI SGVIKI++ G+T GSKAALVYGQMNEPPGARARV LTGLT+AEYFRDVEGQDVLLFVDNIFRFTQA +EVSALLGRIPSAVGYQPTLATD+GALQERITST KGSITSVQA+YVPADDLTDPAPATTF+HLDATTVLSR+I+ELGIYPAVDPLDS SR++DP + +HY R TQKLLQDYK LQDIIAILGMDELSE+DKLTVARARK Q+FMSQP HVAEVFTG +GKFVPL+++IS F +I+ G YDD+PE AFYMVG I++V+ KA +LA L++ Sbjct: 1 MLSRVGLTAMRGARSMATDA----------KKATGSVGQITQIIGAVVDVQFKDNLPPILNALEIKTQ-DNTRIVLEVAQHLGENTVRTIAMEGTDGLVRGQECVDTGNPIMVPVGPETLGRIMNVIGESVDERGPINAKRHAPIHTSAPLLTEQGSGAEILVTGMKVVDLLAPYAKGGKIGLFGGAGVGKTVVIMELINNVANNHGGVSVFAGVGERTREGNDLYYEMIESGVIKINE-DGTTTGSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDVEGQDVLLFVDNIFRFTQACSEVSALLGRIPSAVGYQPTLATDLGALQERITSTKKGSITSVQAIYVPADDLTDPAPATTFSHLDATTVLSRQISELGIYPAVDPLDSKSRMLDPRIIGQEHYDVARATQKLLQDYKGLQDIIAILGMDELSEDDKLTVARARKVQKFMSQPLHVAEVFTGKAGKFVPLQDTISSFKDIIAGNYDDLPEAAFYMVGGIEEVKAKAAELAAELDE 501 The following BLAST results are available for this feature:
BLAST of NO11G01140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G01140 ID=NO11G01140|Name=NO11G01140|organism=Nannochloropsis oceanica|type=gene|length=6132bpback to top protein sequence of NO11G01140.1 >NO11G01140.1-protein ID=NO11G01140.1-protein|Name=NO11G01140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=699bpback to top Synonyms
Publications
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