jgi.p|Nanoce1779_2|591030, gene_4993 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|591030
Unique Namegene_4993
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_12:197732..200791 +

Link to JBrowse

Properties
Property NameValue
TranscriptId591116
ProteinId591030
Product nameP-loop containing nucleoside triphosphate hydrolase protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_12supercontigscaffold_12:197732..200791 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0045259proton-transporting ATP synthase complex
GO:0016021integral component of membrane
GO:0016469proton-transporting two-sector ATPase complex
Vocabulary: Biological Process
TermDefinition
GO:0006754ATP biosynthetic process
GO:0015986ATP synthesis coupled proton transport
Vocabulary: Molecular Function
TermDefinition
GO:0008553proton-exporting ATPase activity, phosphorylative mechanism
GO:0046933proton-transporting ATP synthase activity, rotational mechanism
GO:0046961proton-transporting ATPase activity, rotational mechanism
GO:0000166nucleotide binding
GO:0017111nucleoside-triphosphatase activity
GO:0015078proton transmembrane transporter activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL010ncniL010Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G01140NO11G01140Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591030mRNA_4993-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|591030mRNA_4993Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|591030

>mRNA_4993-protein ID=mRNA_4993-protein|Name=jgi.p|Nanoce1779_2|591030|organism=Nannochloropsis oceanica|type=polypeptide|length=699bp
MAFAASRMLKRGLTSFRGAARASTPAAFSRRWMSQVAEAPVKDGRVLQVI
GAVVDVEFDDKLPRVLNALEVEVEKGRPRLVLEVAQHIGERVVRTIAMDA
TEGLVRGQKVCDKGDAIQVPVGPGTLGRILNVIGEPIDEKGPIKAAAQWS
IHRPAPLLTEQGESDAILSTGIKVIDLIGPYSKGGKIGLFGGAGVGKTVV
IMELINNVAMNHGGFSVFAGVGERTREGNDLYHEMITSGVIKIDKATGST
DGSKAALVYGQMNEPPGARARVALTGLTIAEYFRDVEGQDVLLFVDNIFR
FTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERITSTLKGSITSVQAV
YVPADDLTDPAPATTFAHLDATTVLSRKIAELGIYPAVDPLDSSSRLMDP
EYVSLDHYKTTRDTQKLLQDYKSLQDIIAILGMDELSEEDKLTVARARKA
QRFMSQPFHVAEVFTGFSGKFVPLEESISGFAEILKGTYDDIPEQAFYMV
GNIKDVQDKATKLAKSLEKNVKGSAAAAAAALQYSLGGQADLITKGMEQY
GLKNDKSASQIQSDIEPFTVPPSLISGFDSVPGVGSESSEAEIKEKFTEA
FNALTPEQKTEAKNYAKAFLSKDWKQFIDPEIEQSAAADKDEWPWAGPEE
LPEEYLKIDVPEDMMVEPPKEWWLVKHPKWVAKFGKDYAAKYTPANYR*
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Synonyms
Publications