NO11G00860, NO11G00860 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO11G00860 vs. NCBI_GenBank
Match: EWM25097.1 (hypothetical protein Naga_100016g54 [Nannochloropsis gaditana]) HSP 1 Score: 668.3 bits (1723), Expect = 9.100e-188 Identity = 450/949 (47.42%), Postives = 553/949 (58.27%), Query Frame = 0
Query: 15 VLTKKGHRAEVLTDAATKRLLDLGWDMGCDPTHNTQHLLYRGGVPECPWENVLHKKQLNAFLAEVASKGHMECSSDDLRAEAARLACSSCRRQLEEAIDRCLMAKTTSICPSVKVTRVVG--DSSSSSSEIADEKKDGAKGKSSKHRQGKEPKAHGDKKDEMRNGEDGNSWDKKPRRRLGPVGGTMSMAQLEQLKALVKASAATSESLSLSSSERLVALLEPEVGVSSGGGEKSNDAEVTS-----------------------KGSAFAWALLP--------GDGEAAKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLMRRMT------------ALGQRGGDEKEEGQGGQTPGSWLREKLAALVEHHRVLMELGAATDSLIELSTLTSSSTGGGGAEARGVALKVEGASDYKSLHEYQAQNNNTKLPALLQAQETHLTQWLLVLTALVRALLRLEACLMLVPAESREVLRVLIKDVYAQYEHAMEELMEVHIEGKKNMLKLLPTMRTQELFIIINYPPPLEIRHLAAKHLQEKRRIVLRLHEAVARRLLXXXXXXXXXXXXXXXXXXXXXXXXXMHYVRTGVVDLELLVRRTRALLERYMHLGQDPMGFFAGEAWAPAEKKEEKCFGLRVCLLAGTQPKANRTDIVQEAQEHETELRGAVTEWEARLQGLFEATSAAFASELAVDRFPQSLHMAEALRQRQLDFAAEWESHREGYKFQVTLSQKRLEEVNAANHEEKMRLRLXXXXXXXXXXXXXXXXXXXXQLQVKESVHGSASAAMDQLLLLDGGADG---ACKSGPTTAEGKAVAEMHNLLQAAQLQQLEQCLRFRVLAVRHMMQRMRLVREHQAFLKVGLSRRAIVTRALCGEGSDATAKLKLLLARLLLQKLGNAYGDWQAVLMERELSVE 916
++ +K +R E+ +DAATK L++LGWD CDPTHNTQH +Y+ +P+ PWE++ +KQLNAFL++ +G + C+ D+LRAEAARLAC SC+ +E+A+DR + AK++S+CPS+K+T+ G S S E A + +G Q E + E+ N D SW ++ PVGG +S +QLEQL+ +VK SAAT ESLSLS S+RLVALL E G S G + + E S + SA L+P DG+ XXXXXXXX R T AL GG+ G QT G WLREKLA+LV+H+R LME GAA D +S LT+S GG R L G+ S EYQ Q+ KLP LLQ QE HL QWL LT LVR+LLRLEACL LV +SREVL LIK +YAQYE ++EELM+VHI+G+K ML++LP QE FII+NYP P E RH++A+HL+EKRRIVLRLHE VA+ LL G+ + + RRTRALLERYMHLG DPMGFF G+ W EKKEEKC+ LRV LLAGTQPK++RT+I+QEAQEHET LR VTEWE +LQ LFEATSAAF ELAV FPQSL MAEALR RQ F AEWE+HREGYKFQVTLSQ+RL+EV AANHEEK+RLR L K++ + S + L +GG +G M++LLQ AQLQQLEQCL FRV+AVRHM QR+RLVR HQAFLK LSRRAIVTRALCG+ SDA K++LLLARLL+QKLG+AYGDWQA LME+ELS +
Sbjct: 1 MMGRKVNRGEIPSDAATKLLVELGWDFDCDPTHNTQHQVYQATMPDLPWESLGQRKQLNAFLSDAIVRGKLVCTRDELRAEAARLACKSCKSLVEDAMDRFVEAKSSSVCPSLKMTKAAGALGDSCRSGEGALDTSEGIVKPQETESQDDEGSLQAISQ-ELVNVAD-LSW------KIEPVGGGISSSQLEQLQEIVKMSAATPESLSLSGSDRLVALLAEEGGSSKDGHDMAKIMETLSFADGXXXXXXXXXXXXXXXXXXXQPSASVGRLIPHTSPGIVADDGDVMGQLEGXXXXXXXXVMHCLERTGQEAVWSEGTKGKEGKVDGNGKRREGTEVSKKLREKNDAGNGNDPKQSGKERSTEGDTSEHEGQAAALRLLGGEHAGHG-AVQTAGEWLREKLASLVQHYRGLMEAGAAAD---RMSELTASERRGG----RDAGLSAAGSGASNSFLEYQLQHQAYKLPQLLQTQEAHLRQWLHTLTELVRSLLRLEACLTLVAGQSREVLSRLIKCIYAQYEKSIEELMQVHIQGRKAMLRVLPATLAQEFFIILNYPAPPEARHMSARHLEEKRRIVLRLHELVAQYLLPQSTDESPLA------------------AGQGLANYD--GRRTRALLERYMHLGHDPMGFFKGDFWDIVEKKEEKCYNLRVSLLAGTQPKSHRTEILQEAQEHETALRATVTEWEGKLQDLFEATSAAFEKELAVSCFPQSLEMAEALRGRQRAFIAEWEAHREGYKFQVTLSQERLQEVYAANHEEKLRLR--QRNEAALVAEHENSTDARKHLPAKDTAKDTRSGTDNP--LPNGGKEGPNDXXXXXXXXXXXXXXXXMNSLLQQAQLQQLEQCLAFRVVAVRHMTQRLRLVRGHQAFLKTNLSRRAIVTRALCGQSSDAATKMRLLLARLLVQKLGSAYGDWQATLMEQELSAQ 909
BLAST of NO11G00860 vs. NCBI_GenBank
Match: XP_005856289.1 (ubiquitin specific peptidase 54, partial [Nannochloropsis gaditana CCMP526] >EKU20069.1 ubiquitin specific peptidase 54, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 535.0 bits (1377), Expect = 1.200e-147 Identity = 317/552 (57.43%), Postives = 371/552 (67.21%), Query Frame = 0
Query: 367 WLREKLAALVEHHRVLMELGAATDSLIELSTLTSSSTGGGGAEARGVALKVEGASDYKSLHEYQAQNNNTKLPALLQAQETHLTQWLLVLTALVRALLRLEACLMLVPAESREVLRVLIKDVYAQYEHAMEELMEVHIEGKKNMLKLLPTMRTQELFIIINYPPPLEIRHLAAKHLQEKRRIVLRLHEAVARRLLXXXXXXXXXXXXXXXXXXXXXXXXXMHYVRTGVVDLELLVRRTRALLERYMHLGQDPMGFFAGEAWAPAEKKEEKCFGLRVCLLAGTQPKANRTDIVQEAQEHETELRGAVTEWEARLQGLFEATSAAFASELAVDRFPQSLHMAEALRQRQLDFAAEWESHREGYKFQVTLSQKRLEEVNAANHEEKMRLRLXXXXXXXXXXXXXXXXXXXXQLQVKESVHGSASAAMDQLLLLDGGADG---ACKSGPTTAEGKAVAEMHNLLQAAQLQQLEQCLRFRVLAVRHMMQRMRLVREHQAFLKVGLSRRAIVTRALCGEGSDATAKLKLLLARLLLQKLGNAYGDWQAVLMERELSVE 916
WLREKLA+LV+H+R LME GAA D +S LT+S GG R L G+ S EYQ Q+ KLP LLQ QE HL QWL LT LVR+LLRLEACL LV +SREVL LIK +YAQYE ++EELM+VHI+G+K ML++LP QE FII+NYP P E RH++A+HL+EKRRIVLRLHE VA+ LL G+ + + RRTRALLERYMHLG DPMGFF G+ W EKKEEKC+ LRV LLAGTQPK++RT+I+QEAQEHET LR VTEWE +LQ LFEATSAAF ELAV FPQSL MAEALR RQ F AEWE+HREGYKFQVTLSQ+RL+EV AANHEEK+RLR L K++ + S + L +GG +G M++LLQ AQLQQLEQCL FRV+AVRHM QR+RLVR HQAFLK LSRRAIVTRALCG+ SDA K++LLLARLL+QKLG+AYGDWQA LME+ELS +
Sbjct: 2 WLREKLASLVQHYRGLMEAGAAAD---RMSELTASERRGG----RDAGLSAAGSGASNSFLEYQLQHQAYKLPQLLQTQEAHLRQWLHTLTELVRSLLRLEACLTLVAGQSREVLSRLIKCIYAQYEKSIEELMQVHIQGRKAMLRVLPATLAQEFFIILNYPAPPEARHMSARHLEEKRRIVLRLHELVAQYLLPQSTDESPLA------------------AGQGLANYD--GRRTRALLERYMHLGHDPMGFFKGDFWDIVEKKEEKCYNLRVSLLAGTQPKSHRTEILQEAQEHETALRATVTEWEGKLQDLFEATSAAFEKELAVSCFPQSLEMAEALRGRQRAFIAEWEAHREGYKFQVTLSQERLQEVYAANHEEKLRLR--QRNEAALVAEHENSTDARKHLPAKDTAKDTRSGTDNP--LPNGGKEGPNDXXXXXXXXXXXXXXXXMNSLLQQAQLQQLEQCLAFRVVAVRHMTQRLRLVRGHQAFLKTNLSRRAIVTRALCGQSSDAATKMRLLLARLLVQKLGSAYGDWQATLMEQELSAQ 522 HSP 2 Score: 93.2 bits (230), Expect = 1.200e-14 Identity = 63/157 (40.13%), Postives = 84/157 (53.50%), Query Frame = 0
Query: 2227 QQGASSLSRRAHASNAYAGARLQTPQFQAQQQQQASRGPVLVGGGLANGTGQNHCYLNVVVQSLWSLRAFRDRICHGAVISXXXXXXXXXXXXXXXXXXXXXXXXAVMDGLTKQETDIAAHHNQQGQGEREPAITSTSVVSVDGLRQVLSELVGQKS 2384
+ G ++ + +H + +L + + + VLVGGGLAN GQNHCYLNVVVQSLWS+RAFR+R+C S AVM+GL+ QE +IA+H ++G+ P VVSVD LRQVLSE+V QKS
Sbjct: 1386 EAGIATGAHLSHPPKQESRVKLPSDRXXXXXXXSQAGSRVLVGGGLANRMGQNHCYLNVVVQSLWSIRAFRNRVCRDTDTS-----MLVKSNETAHMCKLHEALRAVMEGLSDQEANIASH--ERGEDTTIP----PPVVSVDKLRQVLSEMVRQKS 1531
BLAST of NO11G00860 vs. NCBI_GenBank
Match: EWM25089.1 (inactive ubiquitin carboxyl-terminal hydrolase 54 [Nannochloropsis gaditana]) HSP 1 Score: 120.9 bits (302), Expect = 5.400e-23 Identity = 87/216 (40.28%), Postives = 109/216 (50.46%), Query Frame = 0
Query: 2227 QQGASSLSRRAHASNAYAGARLQTPQFQAQQQQQASRGPVLVGGGLANGTGQNHCYLNVVVQSLWSLRAFRDRICHGAVISXXXXXXXXXXXXXXXXXXXXXXXXAVMDGLTKQETDIAAHHNQQGQGEREPAITSTSVVSVDGLRQVLSELVGQKSAIANAKAXXXXXXXXXXXXXXXVDNNARTNVSVNKFRAGHMDDAVEAFEEILGLLNAGG 2443
+ G ++ + +H + +L + + + VLVGGGLAN GQNHCYLNVVVQSLWS+RAFR+R+C S AVM+GL+ QE +IA+H ++G+ P VVSVD LRQVLSE+V QKS A + V KFRAGHMDDAVEAFEEIL LL GG
Sbjct: 221 EAGIATGAHLSHPPKQESRVKLPSDRXXXXXXXSQAGSRVLVGGGLANRMGQNHCYLNVVVQSLWSIRAFRNRVCRDTDTS-----MLVKSNETAHMCKLHEALRAVMEGLSDQEANIASH--ERGEDTTIP----PPVVSVDKLRQVLSEMVRQKSNPTPA-------------------CGSEIYVHDGKFRAGHMDDAVEAFEEILRLLGTGG 406 The following BLAST results are available for this feature:
BLAST of NO11G00860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 3
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G00860 ID=NO11G00860|Name=NO11G00860|organism=Nannochloropsis oceanica|type=gene|length=7380bpback to top protein sequence of NO11G00860.1 >NO11G00860.1-protein ID=NO11G00860.1-protein|Name=NO11G00860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=2460bpback to top Synonyms
Publications
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