Naga_100016g54, gene5367 (gene) Nannochloropsis gaditana

Overview
NameNaga_100016g54
Unique Namegene5367
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:272643..277226 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100016g54
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:272643..277226 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G00860NO11G00860Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5554rna5554-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5554rna5554Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5554

>rna5554-protein ID=rna5554-protein|Name=rna5554|organism=Nannochloropsis gaditana|type=polypeptide|length=1527bp
MMGRKVNRGEIPSDAATKLLVELGWDFDCDPTHNTQHQVYQATMPDLPWE
SLGQRKQLNAFLSDAIVRGKLVCTRDELRAEAARLACKSCKSLVEDAMDR
FVEAKSSSVCPSLKMTKAAGALGDSCRSGEGALDTSEGIVKPQETESQDD
EGSLQAISQELVNVADLSWKIEPVGGGISSSQLEQLQEIVKMSAATPESL
SLSGSDRLVALLAEEGGSSKDGHDMAKIMETLSFADGSGKKKNKKKKRKK
AVSVAAQPSASVGRLIPHTSPGIVADDGDVMGQLEGGGGGGDDEVMHCLE
RTGQEAVWSEGTKGKEGKVDGNGKRREGTEVSKKLREKNDAGNGNDPKQS
GKERSTEGDTSEHEGQAAALRLLGGEHAGHGAVQTAGEWLREKLASLVQH
YRGLMEAGAAADRMSELTASERRGGRDAGLSAAGSGASNSFLEYQLQHQA
YKLPQLLQTQEAHLRQWLHTLTELVRSLLRLEACLTLVAGQSREVLSRLI
KCIYAQYEKSIEELMQVHIQGRKAMLRVLPATLAQEFFIILNYPAPPEAR
HMSARHLEEKRRIVLRLHELVAQYLLPQSTDESPLAAGQGLANYDGRRTR
ALLERYMHLGHDPMGFFKGDFWDIVEKKEEKCYNLRVSLLAGTQPKSHRT
EILQEAQEHETALRATVTEWEGKLQDLFEATSAAFEKELAVSCFPQSLEM
AEALRGRQRAFIAEWEAHREGYKFQVTLSQERLQEVYAANHEEKLRLRQR
NEAALVAEHENSTDARKHLPAKDTAKDTRSGTDNPLPNGGKEGPNDGGKG
GKPGIEAVTAMNMNSLLQQAQLQQLEQCLAFRVVAVRHMTQRLRLVRGHQ
AFLKTNLSRRAIVTRALCGQSSDAATKMRLLLARLLVQKLGSAYGDWQAT
LMEQELSAQEERDKQQQLLKKGGGAHSMTMGKKKGSTRVGTLTGKAALAV
NGRASSLMGKEGLAASSSSAGPVFTGTEPTAESFCCLDRGDSTQAGPDRM
EGAASCVFLSSKEVTKPKGKGGAEGEMGNAAQASFLSSGRSSLKESRPLQ
SPSWIDSQGNFLTSARSLAHHQSEAAASGECDGLELGWIRVSSREGRHRA
LTRKEEKRHEQLQEDATLAAEEEHKVPKLRPRDQREEEQRKESAQERVKG
QHGVEAGRLSLRIYRGEGNGAQSQSASSPWTAHSDTNAEVARIIPSSSAP
PSPPSTNEERPHETREDPLSSSKLAATSTHATNLESVDNFSKTAFKVDVR
GGSGGNGKALKEDDVVCKDGNSLGGRDLQRATGSDAFDPGKAVEGNDEED
EDIGDVEILFGAFGGVQETRGGECESYSEGCEDFQIRSGGPEEQHMSPID
VETPVRMSHSRGNTQPPMDDFSTQPSQPLLQLPVAERSQHHLIAQRGRDV
EMDVAQDQSHRRHQDDVSSSPHLVACPPSHPQTHVGAQWPAVPSFHQPLP
DVNGSITAPLARPELAHSGIYPTQYSHAMGKVHPHMVEGGGAAAQSSALS
RLLSVRALPLLRRCSASQYSYFCSLFP
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Synonyms
Publications