NO11G00850, NO11G00850 (gene) Nannochloropsis oceanica

Overview
NameNO11G00850
Unique NameNO11G00850
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length504
Alignment locationchr11:336952..337455 -

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Properties
Property NameValue
DescriptionInactive ubiquitin carboxyl-terminal hydrolase 54
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:336952..337455 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0036459thiol-dependent ubiquitinyl hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0016579protein deubiquitination
Homology
[Close]
BLAST of NO11G00850 vs. NCBI_GenBank
Match: XP_017086396.1 (PREDICTED: uncharacterized protein LOC108118295 isoform X3 [Drosophila eugracilis])

HSP 1 Score: 82.4 bits (202), Expect = 1.500e-12
Identity = 59/166 (35.54%), Postives = 81/166 (48.80%), Query Frame = 0 
Query:    3 LDFGALLQGAGS-GDLYRCSNTERCNFARRGEKHAGHRYLVGNTPLVFSLGLVWDSLKGDPHETQALIGLIAPVLRLGHFKLPLQQQSYQGQGQQQRECVGVLKGFFAFHPQKHHYVAFFFHPGAG-WVCLDDGVGKMLGPTHVEALRQCAEEHYQPTLLFYEVDQ 167
            L FG LL+ AG+ GD+  C NT  C     G K    R L+ N P V S+G+VWDS +    +  A++  +   LRLG     + +Q +    Q Q E VG++  +        HY  FFFH     WV  DD   K +GP+    + +C+   YQP LL Y V Q
Sbjct:  217 LSFGQLLRAAGNMGDIRDCPNT--C-----GAKIGICRALL-NRPDVVSIGIVWDSERPAADQVHAVLKAVGTSLRLGDVFHQVSEQRW--AQQTQHELVGIVSYY------GKHYTTFFFHTKLKVWVYFDDANVKEVGPSWEGVVDKCSRGRYQPLLLLYAVPQ 366
[Close]
BLAST of NO11G00850 vs. NCBI_GenBank
Match: XP_017109079.1 (PREDICTED: uncharacterized protein LOC108133592 [Drosophila bipectinata])

HSP 1 Score: 82.4 bits (202), Expect = 1.500e-12
Identity = 59/166 (35.54%), Postives = 81/166 (48.80%), Query Frame = 0 
Query:    3 LDFGALLQGAGS-GDLYRCSNTERCNFARRGEKHAGHRYLVGNTPLVFSLGLVWDSLKGDPHETQALIGLIAPVLRLGHFKLPLQQQSYQGQGQQQRECVGVLKGFFAFHPQKHHYVAFFFHPGAG-WVCLDDGVGKMLGPTHVEALRQCAEEHYQPTLLFYEVDQ 167
            L FG LL+ AG+ GD+  C NT  C     G K    R L+ N P V S+G+VWDS +    +  A++  +   LRLG     + +Q +    Q Q E VG++  +        HY  FFFH     WV  DD   K +GP+    + +C+   YQP LL Y V Q
Sbjct:  286 LSFGQLLRAAGNMGDIRDCPNT--C-----GAKIGICRALL-NRPDVVSIGIVWDSERPAADQVHAVLKAVGTSLRLGDVFHQVSEQRW--AQQTQHELVGIVSYY------GKHYTTFFFHTKLKVWVYFDDANVKEVGPSWEGVVDKCSRGRYQPLLLLYAVPQ 435
[Close]
BLAST of NO11G00850 vs. NCBI_GenBank
Match: XP_016951938.1 (PREDICTED: uncharacterized protein LOC108025805 [Drosophila biarmipes])

HSP 1 Score: 82.4 bits (202), Expect = 1.500e-12
Identity = 59/166 (35.54%), Postives = 81/166 (48.80%), Query Frame = 0 
Query:    3 LDFGALLQGAGS-GDLYRCSNTERCNFARRGEKHAGHRYLVGNTPLVFSLGLVWDSLKGDPHETQALIGLIAPVLRLGHFKLPLQQQSYQGQGQQQRECVGVLKGFFAFHPQKHHYVAFFFHPGAG-WVCLDDGVGKMLGPTHVEALRQCAEEHYQPTLLFYEVDQ 167
            L FG LL+ AG+ GD+  C NT  C     G K    R L+ N P V S+G+VWDS +    +  A++  +   LRLG     + +Q +    Q Q E VG++  +        HY  FFFH     WV  DD   K +GP+    + +C+   YQP LL Y V Q
Sbjct:  275 LSFGQLLRAAGNMGDIRDCPNT--C-----GAKIGICRALL-NRPDVVSIGIVWDSERPAADQVHAVLKAVGTSLRLGDVFHQVSEQRW--AQQTQHELVGIVSYY------GKHYTTFFFHTKLKVWVYFDDANVKEVGPSWEGVVDKCSRGRYQPLLLLYAVPQ 424
[Close]
BLAST of NO11G00850 vs. NCBI_GenBank
Match: XP_017045952.1 (PREDICTED: uncharacterized protein LOC108091324 isoform X1 [Drosophila ficusphila])

HSP 1 Score: 82.4 bits (202), Expect = 1.500e-12
Identity = 59/166 (35.54%), Postives = 81/166 (48.80%), Query Frame = 0 
Query:    3 LDFGALLQGAGS-GDLYRCSNTERCNFARRGEKHAGHRYLVGNTPLVFSLGLVWDSLKGDPHETQALIGLIAPVLRLGHFKLPLQQQSYQGQGQQQRECVGVLKGFFAFHPQKHHYVAFFFHPGAG-WVCLDDGVGKMLGPTHVEALRQCAEEHYQPTLLFYEVDQ 167
            L FG LL+ AG+ GD+  C NT  C     G K    R L+ N P V S+G+VWDS +    +  A++  +   LRLG     + +Q +    Q Q E VG++  +        HY  FFFH     WV  DD   K +GP+    + +C+   YQP LL Y V Q
Sbjct:  282 LSFGQLLRAAGNMGDIRDCPNT--C-----GAKIGICRALL-NRPDVVSIGIVWDSERPAADQVHAVLKAVGTSLRLGDVFHQVSEQRW--AQQTQHELVGIVSYY------GKHYTTFFFHTKLKVWVYFDDANVKEVGPSWEGVVDKCSRGRYQPLLLLYAVPQ 431
[Close]
BLAST of NO11G00850 vs. NCBI_GenBank
Match: XP_017045953.1 (PREDICTED: uncharacterized protein LOC108091324 isoform X2 [Drosophila ficusphila])

HSP 1 Score: 82.4 bits (202), Expect = 1.500e-12
Identity = 59/166 (35.54%), Postives = 81/166 (48.80%), Query Frame = 0 
Query:    3 LDFGALLQGAGS-GDLYRCSNTERCNFARRGEKHAGHRYLVGNTPLVFSLGLVWDSLKGDPHETQALIGLIAPVLRLGHFKLPLQQQSYQGQGQQQRECVGVLKGFFAFHPQKHHYVAFFFHPGAG-WVCLDDGVGKMLGPTHVEALRQCAEEHYQPTLLFYEVDQ 167
            L FG LL+ AG+ GD+  C NT  C     G K    R L+ N P V S+G+VWDS +    +  A++  +   LRLG     + +Q +    Q Q E VG++  +        HY  FFFH     WV  DD   K +GP+    + +C+   YQP LL Y V Q
Sbjct:  245 LSFGQLLRAAGNMGDIRDCPNT--C-----GAKIGICRALL-NRPDVVSIGIVWDSERPAADQVHAVLKAVGTSLRLGDVFHQVSEQRW--AQQTQHELVGIVSYY------GKHYTTFFFHTKLKVWVYFDDANVKEVGPSWEGVVDKCSRGRYQPLLLLYAVPQ 394
[Close]
BLAST of NO11G00850 vs. NCBI_GenBank
Match: XP_017045954.1 (PREDICTED: protein split ends isoform X3 [Drosophila ficusphila])

HSP 1 Score: 82.4 bits (202), Expect = 1.500e-12
Identity = 59/166 (35.54%), Postives = 81/166 (48.80%), Query Frame = 0 
Query:    3 LDFGALLQGAGS-GDLYRCSNTERCNFARRGEKHAGHRYLVGNTPLVFSLGLVWDSLKGDPHETQALIGLIAPVLRLGHFKLPLQQQSYQGQGQQQRECVGVLKGFFAFHPQKHHYVAFFFHPGAG-WVCLDDGVGKMLGPTHVEALRQCAEEHYQPTLLFYEVDQ 167
            L FG LL+ AG+ GD+  C NT  C     G K    R L+ N P V S+G+VWDS +    +  A++  +   LRLG     + +Q +    Q Q E VG++  +        HY  FFFH     WV  DD   K +GP+    + +C+   YQP LL Y V Q
Sbjct:  215 LSFGQLLRAAGNMGDIRDCPNT--C-----GAKIGICRALL-NRPDVVSIGIVWDSERPAADQVHAVLKAVGTSLRLGDVFHQVSEQRW--AQQTQHELVGIVSYY------GKHYTTFFFHTKLKVWVYFDDANVKEVGPSWEGVVDKCSRGRYQPLLLLYAVPQ 364
[Close]
BLAST of NO11G00850 vs. NCBI_GenBank
Match: XP_016980140.1 (PREDICTED: uncharacterized protein LOC108045352 isoform X1 [Drosophila rhopaloa])

HSP 1 Score: 82.4 bits (202), Expect = 1.500e-12
Identity = 59/166 (35.54%), Postives = 81/166 (48.80%), Query Frame = 0 
Query:    3 LDFGALLQGAGS-GDLYRCSNTERCNFARRGEKHAGHRYLVGNTPLVFSLGLVWDSLKGDPHETQALIGLIAPVLRLGHFKLPLQQQSYQGQGQQQRECVGVLKGFFAFHPQKHHYVAFFFHPGAG-WVCLDDGVGKMLGPTHVEALRQCAEEHYQPTLLFYEVDQ 167
            L FG LL+ AG+ GD+  C NT  C     G K    R L+ N P V S+G+VWDS +    +  A++  +   LRLG     + +Q +    Q Q E VG++  +        HY  FFFH     WV  DD   K +GP+    + +C+   YQP LL Y V Q
Sbjct:  264 LSFGQLLRAAGNMGDIRDCPNT--C-----GAKIGICRALL-NRPDVVSIGIVWDSERPAADQVHAVLKAVGTSLRLGDVFHQVSEQRW--AQQTQHELVGIVSYY------GKHYTTFFFHTKLKVWVYFDDANVKEVGPSWEGVVDKCSRGRYQPLLLLYAVPQ 413
[Close]
BLAST of NO11G00850 vs. NCBI_GenBank
Match: XP_016980141.1 (PREDICTED: uncharacterized protein LOC108045352 isoform X2 [Drosophila rhopaloa])

HSP 1 Score: 82.4 bits (202), Expect = 1.500e-12
Identity = 59/166 (35.54%), Postives = 81/166 (48.80%), Query Frame = 0 
Query:    3 LDFGALLQGAGS-GDLYRCSNTERCNFARRGEKHAGHRYLVGNTPLVFSLGLVWDSLKGDPHETQALIGLIAPVLRLGHFKLPLQQQSYQGQGQQQRECVGVLKGFFAFHPQKHHYVAFFFHPGAG-WVCLDDGVGKMLGPTHVEALRQCAEEHYQPTLLFYEVDQ 167
            L FG LL+ AG+ GD+  C NT  C     G K    R L+ N P V S+G+VWDS +    +  A++  +   LRLG     + +Q +    Q Q E VG++  +        HY  FFFH     WV  DD   K +GP+    + +C+   YQP LL Y V Q
Sbjct:  209 LSFGQLLRAAGNMGDIRDCPNT--C-----GAKIGICRALL-NRPDVVSIGIVWDSERPAADQVHAVLKAVGTSLRLGDVFHQVSEQRW--AQQTQHELVGIVSYY------GKHYTTFFFHTKLKVWVYFDDANVKEVGPSWEGVVDKCSRGRYQPLLLLYAVPQ 358
[Close]
BLAST of NO11G00850 vs. NCBI_GenBank
Match: XP_017029001.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC108079229 [Drosophila kikkawai])

HSP 1 Score: 82.4 bits (202), Expect = 1.500e-12
Identity = 59/166 (35.54%), Postives = 81/166 (48.80%), Query Frame = 0 
Query:    3 LDFGALLQGAGS-GDLYRCSNTERCNFARRGEKHAGHRYLVGNTPLVFSLGLVWDSLKGDPHETQALIGLIAPVLRLGHFKLPLQQQSYQGQGQQQRECVGVLKGFFAFHPQKHHYVAFFFHPGAG-WVCLDDGVGKMLGPTHVEALRQCAEEHYQPTLLFYEVDQ 167
            L FG LL+ AG+ GD+  C NT  C     G K    R L+ N P V S+G+VWDS +    +  A++  +   LRLG     + +Q +    Q Q E VG++  +        HY  FFFH     WV  DD   K +GP+    + +C+   YQP LL Y V Q
Sbjct:  278 LSFGQLLRAAGNMGDIRDCPNT--C-----GAKIGICRALL-NRPDVVSIGIVWDSERPAADQVHAVLKAVGTSLRLGDVFHQVSEQRW--AQQTQHELVGIVSYY------GKHYTTFFFHTKLKVWVYFDDANVKEVGPSWEGVVDKCSRGRYQPLLLLYAVPQ 427
[Close]
BLAST of NO11G00850 vs. NCBI_GenBank
Match: XP_020800695.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC110178021 [Drosophila serrata])

HSP 1 Score: 82.4 bits (202), Expect = 1.500e-12
Identity = 59/166 (35.54%), Postives = 81/166 (48.80%), Query Frame = 0 
Query:    3 LDFGALLQGAGS-GDLYRCSNTERCNFARRGEKHAGHRYLVGNTPLVFSLGLVWDSLKGDPHETQALIGLIAPVLRLGHFKLPLQQQSYQGQGQQQRECVGVLKGFFAFHPQKHHYVAFFFHPGAG-WVCLDDGVGKMLGPTHVEALRQCAEEHYQPTLLFYEVDQ 167
            L FG LL+ AG+ GD+  C NT  C     G K    R L+ N P V S+G+VWDS +    +  A++  +   LRLG     + +Q +    Q Q E VG++  +        HY  FFFH     WV  DD   K +GP+    + +C+   YQP LL Y V Q
Sbjct:  284 LSFGQLLRAAGNMGDIRDCPNT--C-----GAKIGICRALL-NRPDVVSIGIVWDSERPAADQVHAVLKAVGTSLRLGDVFHQVSEQRW--AQQTQHELVGIVSYY------GKHYTTFFFHTKLKVWVYFDDANVKEVGPSWEGVVDKCSRGRYQPLLLLYAVPQ 433
The following BLAST results are available for this feature:
BLAST of NO11G00850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_017086396.11.500e-1235.54PREDICTED: uncharacterized protein LOC108118295 is... [more]
XP_017109079.11.500e-1235.54PREDICTED: uncharacterized protein LOC108133592 [D... [more]
XP_016951938.11.500e-1235.54PREDICTED: uncharacterized protein LOC108025805 [D... [more]
XP_017045952.11.500e-1235.54PREDICTED: uncharacterized protein LOC108091324 is... [more]
XP_017045953.11.500e-1235.54PREDICTED: uncharacterized protein LOC108091324 is... [more]
XP_017045954.11.500e-1235.54PREDICTED: protein split ends isoform X3 [Drosophi... [more]
XP_016980140.11.500e-1235.54PREDICTED: uncharacterized protein LOC108045352 is... [more]
XP_016980141.11.500e-1235.54PREDICTED: uncharacterized protein LOC108045352 is... [more]
XP_017029001.11.500e-1235.54PREDICTED: LOW QUALITY PROTEIN: uncharacterized pr... [more]
XP_020800695.11.500e-1235.54LOW QUALITY PROTEIN: uncharacterized protein LOC11... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL115nonsL115Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002187NSK002187Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G00850.1NO11G00850.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|47858gene_4959Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100016g55gene5366Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G00850.1NO11G00850.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G00850 ID=NO11G00850|Name=NO11G00850|organism=Nannochloropsis oceanica|type=gene|length=504bp
ATGGCTTTGGATTTTGGGGCCTTGCTGCAGGGAGCGGGCTCGGGGGATCT
ATACCGCTGCAGTAACACGGAACGCTGCAATTTTGCGCGGCGCGGGGAGA
AGCATGCCGGTCACCGGTATTTGGTTGGAAATACTCCTTTGGTGTTTTCG
CTGGGATTGGTTTGGGACAGTTTGAAGGGTGATCCGCATGAGACGCAGGC
GCTTATCGGGCTCATTGCGCCGGTCCTGCGCCTGGGGCATTTTAAGCTGC
CCTTGCAGCAGCAGTCGTACCAGGGCCAGGGGCAGCAGCAGAGAGAATGC
GTGGGTGTTCTCAAGGGCTTTTTTGCCTTCCACCCGCAGAAGCACCATTA
TGTAGCGTTCTTCTTCCATCCAGGCGCAGGGTGGGTGTGTCTGGATGATG
GAGTTGGGAAAATGTTGGGACCCACTCACGTTGAGGCTTTGCGGCAGTGC
GCTGAAGAGCACTACCAGCCCACTTTGCTATTTTACGAGGTGGACCAGAG
TTAG
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protein sequence of NO11G00850.1

>NO11G00850.1-protein ID=NO11G00850.1-protein|Name=NO11G00850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=168bp
MALDFGALLQGAGSGDLYRCSNTERCNFARRGEKHAGHRYLVGNTPLVFS
LGLVWDSLKGDPHETQALIGLIAPVLRLGHFKLPLQQQSYQGQGQQQREC
VGVLKGFFAFHPQKHHYVAFFFHPGAGWVCLDDGVGKMLGPTHVEALRQC
AEEHYQPTLLFYEVDQS*
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Synonyms
Publications