jgi.p|Nanoce1779_2|47858, gene_4959 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|47858
Unique Namegene_4959
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_12:121419..129719 -

Link to JBrowse

Properties
Property NameValue
TranscriptId47944
ProteinId47858
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_12supercontigscaffold_12:121419..129719 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL010ncniL010Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G00850NO11G00850Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|47858mRNA_4959-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|47858mRNA_4959Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|47858

>mRNA_4959-protein ID=mRNA_4959-protein|Name=jgi.p|Nanoce1779_2|47858|organism=Nannochloropsis oceanica|type=polypeptide|length=1595bp
MFTATTEQELFHRTIISSLRSKEECRRPRVRGGGAGGGVLTKKGHRAEVL
TDAATKRLLDLGWDMGCDPTHNTQHLLYRGGVPECPWENVLHKKQLNAFL
AEVASKGHMECSSDDLRAEAARLACSSCRRQLEEAIDRCLMAKTTSICPS
VKVTRVVGDSSSSSSEIADEKKDGAKGKSSKHRQGKEPKAHGDKKDEMRN
GEDGNSWDKKPRRRLGPVGGTMSMAQLEQLKALVKASAATSESLSLSSSE
RLVALLEPEVGVSSGGGEKSNDAEVTSKGSAFAWALLPGDGEAAKNESNK
IKSNKCKKKKKRKAKKDEEELRYVEEDEKEGEDEDEKETSKSDRLQRQQQ
QHQQLQRDQDSELLMRRMTALGQRGGDEKEEGQGGQTPGSWLREKLAALV
EHHRVLMELGAATDSLIELSTLTSSSTGGGGAEARGVALKVEGASDYKSL
HEYQAQNNNTKLPALLQAQETHLTQWLLVLTALVRALLRLEACLMLVPAE
SREVLRVLIKDVYAQYEHAMEELMEVHIEGKKNMLKLLPTMRTQELFIII
NYPPPLEIRHLAAKHLQEKRRIVLRLHEAVARRLLPQQPPQPASGTSSSS
SSSSSSSKTSMHYVRTGVVDLELLVRRTRALLERYMHLGQDPMGFFAGEA
WAPAEKKEEKCFGLRVCLLAGTQPKANRTDIVQEAQEHETELRGAVTEWE
ARLQGLFEATSAAFASELAVDRFPQSLHMAEALRQRQLDFAAEWESHREG
YKFQVTLSQKRLEEVNAANHEEKMRLRLRNEAAAAAAGGSNGGGGVRKQL
QVKESVHGSASAAMDQLLLLDGGADGACKSGPTTAEGKAVAEMHNLLQAA
QLQQLEQCLRFRVLAVRHMMQRMRLVREHQAFLKVGLSRRAIVTRALCGE
GSDATAKLKLLLARLLLQKLGNAYGDWQAVLMERELSVEEEKACKQQQQQ
QQQQQQQQQQQEEEEQQEQQEEEEEQQQQQPQPQQPQPQPQPQPQQQPQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQGRPRGGPAPQVVP
AEGFQVRVGGGVGGGGGGGGGERGGGGRRGGMSRGPPQMFLSGGRGGEGG
ETRGGQMMPDQKRVARSNGSGMMRSDEKEESQRRGGLQVGEEEQFQQGAS
SLSRRAHASNAYAGARLQTPQFQAQQQQQASRGPVLVGGGLANGTGQNHC
YLNVVVQSLWSLRAFRDRICHGAVISASSSSSSSGSSSSSGSSNLQQALQ
AVMDGLTKQETDIAAHHNQQGQGEREPAITSTSVVSVDGLRQVLSELVGQ
KSAIANAKASSSSFSSSSFTTSGSVDNNARTNVSVNKFRAGHMDDAVEAF
EEILGLLNAGGGKGRRAVRDAFCLHLREVMLCPGCGCSYPNPARDYDTNV
FYVPVRLLVDEAERRSQFSGQASMEAAMALDFGALLQGAGSGDLYRCSNT
ERCNFARRGEKHAGHRYLVGNTPLVFSLGLVWDSLKGDPHETQALIGLIA
PVLRLGHFKLPLQQQSYQGQGQQQRECVGVLKGFFAFHPQKHHYVAFFFH
PGAGWVCLDDGVGKMLGPTHVEALRQCAEEHYQPTLLFYEVDQS*
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Synonyms
Publications