NO11G00700, NO11G00700 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G00700 vs. NCBI_GenBank
Match: EWM25099.1 (Golgi apparatus membrane protein TVP15 [Nannochloropsis gaditana]) HSP 1 Score: 137.5 bits (345), Expect = 3.200e-29 Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0 Query: 1 MGLACLMAFSAVNGILKIAQFRLDTSFVALYMFIFASILFFFELCQFKYVAWIDNVFRRNFGFMYGSRGKALYIIF 77 MGLACLMAFSAVNGILKIAQ +LDT FVALYMFIFA+ILFFFELCQFKYVA+IDNVFRRNFGFMYGSRGKALYIIF Sbjct: 44 MGLACLMAFSAVNGILKIAQLQLDTFFVALYMFIFAAILFFFELCQFKYVAFIDNVFRRNFGFMYGSRGKALYIIF 119
BLAST of NO11G00700 vs. NCBI_GenBank
Match: OEU14668.1 (hypothetical protein FRACYDRAFT_209434 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 74.3 bits (181), Expect = 3.400e-10 Identity = 49/119 (41.18%), Postives = 67/119 (56.30%), Query Frame = 0 Query: 1 MGLACLMAFSAVNGILKIAQF---RLDTSFVALYMFIFASILFFFELCQFKYVAWIDNVFRRNFGFMYGSRGKALYIIFIAFLNFGL---VSTGVLQFATGIVLAVDGCLMLFATFRYP 114 MGLA +M V I+++ + L F+A YM +FA++LF +EL + V ++ R+NFGFMYG RGK LY+IF+AFL FGL +L +ATG G LF F P Sbjct: 62 MGLAAMMTALGVLTIIQVHRTGLGDLSEPFLAAYMVLFAALLFIYELMWWSPVPKLNKDMRKNFGFMYGLRGKGLYLIFVAFLCFGLGKEAKVAILNYATGASFLAGGLSHLFVVFFRP 180
BLAST of NO11G00700 vs. NCBI_GenBank
Match: XP_002296289.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >ACI65006.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 71.6 bits (174), Expect = 2.200e-9 Identity = 48/118 (40.68%), Postives = 66/118 (55.93%), Query Frame = 0 Query: 5 CLMAFSAVNGILKIAQ--FRLDTSFVALYMFIFASILFFFELCQFKYVAWIDNVFRRNFGFMYGSRGKALYIIFIAFLNFGL---VSTGVLQFATGIVLAVDGCLMLFATFRYPSLFA 118 CL A G+ I L FV++YM +FA++LF FEL +K + ++ R NFGF+YG +GKA Y+IF+AFL GL VS L++ TG G L+LF F P L + Sbjct: 68 CLSALMCCLGVFGIIDNPTSLPEIFVSVYMILFATLLFLFELMWWKSIDSVNKNLRMNFGFLYGIKGKAAYLIFVAFLAIGLRDDVSVKFLRWMTGGCFLGTGILLLFLHFTKPELLS 185
BLAST of NO11G00700 vs. NCBI_GenBank
Match: OQR90301.1 (hypothetical protein ACHHYP_05636 [Achlya hypogyna]) HSP 1 Score: 68.9 bits (167), Expect = 1.400e-8 Identity = 42/128 (32.81%), Postives = 71/128 (55.47%), Query Frame = 0 Query: 6 LMAFSAVNGILKIAQFRLDTSFVALYMFIFASILFFFELCQFKYVAWIDNVFRRNFGFMYGSRGKALYIIFIAFLNFGLVSTGVLQFATGIVLAVDGCLMLFATFRYPSLFAGNTPAQPSASSSHPAA 134 L F+ ++GI I F L FV+LY+ +F + FE C+ ++ +D R+NFGF+Y +G+A +I FI FL+FG + L + GI++ ++ L + R+P +GN A ++ + AA Sbjct: 55 LQVFAGLSGIASIITFNLTAVFVSLYVIMFGVLFLLFE-CR---ISRLDPSIRKNFGFLYSYKGRASFIFFIGFLDFG--TDAGLGYIAGIIMCINAFLNFYVMMRHPEFASGNLSATSDPTAGYTAA 176
BLAST of NO11G00700 vs. NCBI_GenBank
Match: XP_002180769.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47421.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 66.6 bits (161), Expect = 7.000e-8 Identity = 46/112 (41.07%), Postives = 67/112 (59.82%), Query Frame = 0 Query: 26 SFVALYMFIFASILFFFELCQFKYVAWIDNVFRRNFGFMYGSRGKALYIIFIAFLNFGL---VSTGV--LQFATGIVLAVDGCLMLFATFRYPSLFAGNTPAQPSASSSHPA 133 +F++ YM IFA ILF +EL + +A ++ +FR NFGFMYG RGK L+++FIAFL GL ++GV L +ATG+ GC +F + A P P+A + P+ Sbjct: 86 AFLSSYMVIFAVILFLYELIWWTPIAALNKMFRMNFGFMYGLRGKGLFLVFIAFLCLGLRDENASGVKGLDWATGLAWLGAGCFNIFIWMTWSEASAAYKP--PTAGLTGPS 195
BLAST of NO11G00700 vs. NCBI_GenBank
Match: CBJ25882.1 (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 65.1 bits (157), Expect = 2.000e-7 Identity = 42/115 (36.52%), Postives = 60/115 (52.17%), Query Frame = 0 Query: 1 MGLACLMAFSAVNGILKIAQFRLDTSFVALYMFIFASILFFFELCQFKYVAWIDNVFRRNFGFMYGSRGKALYIIFIAFLNFGLVSTGVLQFATGIVLAVDGCLMLFATFRYPSL 116 + L +M +A + ++ F T F+ALY +FA +L E +D RR FG +YG G+AL+IIFIAFLNF L G TG++L + G M+ +YP L Sbjct: 59 LALGLMMIIAAFTELWNLSSF--TTFFIALYNLLFAGVLILHESQGLIMCDGVDYTMRRYFGLVYGHMGRALFIIFIAFLNFALTDAGWFATFTGLLLLLHGGAMIVVFTKYPHL 171
BLAST of NO11G00700 vs. NCBI_GenBank
Match: OQS05568.1 (hypothetical protein THRCLA_02325 [Thraustotheca clavata]) HSP 1 Score: 65.1 bits (157), Expect = 2.000e-7 Identity = 44/128 (34.38%), Postives = 68/128 (53.12%), Query Frame = 0 Query: 6 LMAFSAVNGILKIAQFRLDTSFVALYMFIFASILFFFELCQFKYVAWIDNVFRRNFGFMYGSRGKALYIIFIAFLNFGLVSTGVLQFATGIVLAVDGCLMLFATFRYPSLFAGNTPAQPSASSSHPAA 134 L F+ + GI I F FV+LY+ +F + FE C+ + +D R+NFGF+Y +G+A +I FI F++FG S L + GI++ ++ L +A R+P GN +SSS P A Sbjct: 51 LQIFAGITGIASIITFNFTAFFVSLYIVMFGVLFLMFE-CR---IQRLDPSIRKNFGFLYSYKGRASFIFFIGFMDFGTDSG--LGYIAGIIMCINAILNFYAMMRHPEFRYGNL-----SSSSDPTA 167
BLAST of NO11G00700 vs. NCBI_GenBank
Match: XP_008609858.1 (hypothetical protein SDRG_05894 [Saprolegnia diclina VS20] >EQC36437.1 hypothetical protein SDRG_05894 [Saprolegnia diclina VS20]) HSP 1 Score: 63.9 bits (154), Expect = 4.600e-7 Identity = 40/130 (30.77%), Postives = 68/130 (52.31%), Query Frame = 0 Query: 4 ACLMAFSAVNGILKIAQFRLDTSFVALYMFIFASILFFFELCQFKYVAWIDNVFRRNFGFMYGSRGKALYIIFIAFLNFGLVSTGVLQFATGIVLAVDGCLMLFATFRYPSLFAGNTPAQPSASSSHPAA 134 A L F+ + GI I F L FV++Y+ +F + FE C+ ++ D R NFGF+Y +G+A +I FI F++FG + L + G+++ ++ L +A R+P GN + + + AA Sbjct: 54 AILQIFAGIGGIASIITFNLTAVFVSVYIIMFGVLFLLFE-CR---LSRFDKSLRTNFGFLYSYKGRAFFIFFIGFMDFG--TDDGLGYIAGVIMCINAFLNFYAMMRHPEFKNGNLSSSSDPTVGYAAA 177
BLAST of NO11G00700 vs. NCBI_GenBank
Match: XP_012209835.1 (hypothetical protein SPRG_15357 [Saprolegnia parasitica CBS 223.65] >KDO19452.1 hypothetical protein SPRG_15357 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 63.5 bits (153), Expect = 5.900e-7 Identity = 40/130 (30.77%), Postives = 68/130 (52.31%), Query Frame = 0 Query: 4 ACLMAFSAVNGILKIAQFRLDTSFVALYMFIFASILFFFELCQFKYVAWIDNVFRRNFGFMYGSRGKALYIIFIAFLNFGLVSTGVLQFATGIVLAVDGCLMLFATFRYPSLFAGNTPAQPSASSSHPAA 134 A L F+ + GI I F L FV++Y+ +F + FE C+ ++ + R NFGF+Y +G+A +I FI F++FG + L + GI++ ++ L +A R+P GN + + + AA Sbjct: 52 AILQIFAGIGGIASIITFNLTAVFVSVYIIMFGVLFLLFE-CR---LSRFEKTLRTNFGFLYSYKGRAFFIFFIGFMDFG--TDDGLGYIAGIIMCINAFLNFYAMMRHPEFKNGNLSSSSDPTVGYAAA 175
BLAST of NO11G00700 vs. NCBI_GenBank
Match: GAX23468.1 (hypothetical protein FisN_14Hh363 [Fistulifera solaris]) HSP 1 Score: 63.5 bits (153), Expect = 5.900e-7 Identity = 45/122 (36.89%), Postives = 72/122 (59.02%), Query Frame = 0 Query: 1 MGLACLMAFSAVNGILKIAQFRLD---TSFVALYMFIFASILFFFELCQFKYVAWIDNVFRRNFGFMYGSRGKALYIIFIAFLNFGL---VSTGV--LQFATGIVLAVDGCLMLFATFRYPS 115 +GLA +MA + ++++ L+ +F+A+YM +FA +L +E ++ V I+ FR+NFGFMYG +GK Y+IFIAFL G+ +T V L +ATG+ GC +F + P+ Sbjct: 60 LGLAAMMAALGLLSLIEMDFKELNDVTEAFLAIYMVVFAVLLAMYEFAWWQPVPSINKTFRKNFGFMYGLKGKGFYLIFIAFLCIGMWKDETTAVKGLDWATGLAWLGAGCGHVFLSCCVPN 181 The following BLAST results are available for this feature:
BLAST of NO11G00700 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 11 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G00700 ID=NO11G00700|Name=NO11G00700|organism=Nannochloropsis oceanica|type=gene|length=3011bpback to top protein sequence of NO11G00700.1 >NO11G00700.1-protein ID=NO11G00700.1-protein|Name=NO11G00700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=143bpback to top protein sequence of NO11G00700.2 >NO11G00700.2-protein ID=NO11G00700.2-protein|Name=NO11G00700.2|organism=Nannochloropsis oceanica|type=polypeptide|length=198bpback to top Synonyms
Publications
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