NO11G00660, NO11G00660 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G00660 vs. NCBI_GenBank
Match: EWM24343.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 94.0 bits (232), Expect = 7.100e-16 Identity = 61/198 (30.81%), Postives = 97/198 (48.99%), Query Frame = 0 Query: 56 STSPMETQDLPYLKRLLETNTVGTLGLVQIFLPLIREQGSRIVLMSSLCAHLTPPLFGGLCASKAALESLADAMRRELAPFQISISSIEP-AVTSPAEENEGGGQKAR--------EVYAHLFADDKAQVLVSXXXXXXXXXXXXXXXXXXXXRAVIHAVSSTHPKIRYPAGRVGRLPAPFVAFVSWGLPGRVQDVLL 245 + S +E D+ ++++ + N G L L Q FLPL+R Q RIV +SS+ LT P G C+SK ALESL+D +R ELA + +S++ ++P AV S E +A+ +VY H+ + +++ +A+ A+ +PK R + LPA F ++ LP RV D +L Sbjct: 214 TASTVEHHDVAGMQKIYDVNVWGVLRLTQKFLPLLRAQAGRIVQISSIAGFLTIPRASGYCSSKHALESLSDGLRLELAHYNVSVTVVQPGAVRSAIFEKSQSASQAKLAEDPRELKVYGHMIKEGSTDSIMA-----------KADTPDCTTKAIRQALMDRYPKTREVVANIDGLPAIFAHYMKHMLPDRVLDKML 400
BLAST of NO11G00660 vs. NCBI_GenBank
Match: WP_090751241.1 (SDR family NAD(P)-dependent oxidoreductase [Candidatus Nitrospira nitrosa] >CUS39469.1 Retinol dehydrogenase [Candidatus Nitrospira nitrosa]) HSP 1 Score: 92.4 bits (228), Expect = 2.100e-15 Identity = 64/188 (34.04%), Postives = 88/188 (46.81%), Query Frame = 0 Query: 58 SPMETQDLPYLKRLLETNTVGTLGLVQIFLPLIREQGSRIVLMSSLCAHLTPPLFGGLCASKAALESLADAMRRELAPFQISISSIEP-AVTSPAEENEGGGQKAREVYAHLFADDKAQVLVSXXXXXXXXXXXXXXXXXXXXRAVIHAVSSTHPKIRYPAGRVGRLPAPFVAFVSWGLPGRVQDVLL 245 +P+E L +R LE N +G L + Q FLPLIR+ RIV M S+ T P+ G ASK ALE++ DA+R E+ P+ I +S IEP A+T+P RE + V+ +AV HA+++ PK RY G A AF+ LP R+ D LL Sbjct: 96 APLEAIPLADFRRQLEVNVIGQLAVTQAFLPLIRQARGRIVNMGSIAGRSTIPMMGAYSASKFALEAMTDALRLEVQPWGIQVSIIEPGAITTPIWTKSAEDAAGREAVMGTDLRRLYEPTVAAVRKVVEEAAKRAIPADVVAKAVEHALTAPVPKTRYLVG----TDAKIRAFIGQILPDRIMDRLL 279
BLAST of NO11G00660 vs. NCBI_GenBank
Match: WP_085157209.1 (KR domain-containing protein [Mycobacterium confluentis] >ORV20700.1 retinol dehydrogenase [Mycobacterium confluentis]) HSP 1 Score: 92.4 bits (228), Expect = 2.100e-15 Identity = 71/203 (34.98%), Postives = 101/203 (49.75%), Query Frame = 0 Query: 46 ALVNT--IEAGGSTSPMETQDLPYLKRLLETNTVGTLGLVQIFLPLIREQGSRIVLMSSLCAHLTPPLFGGLCASKAALESLADAMRRELAPFQISISSIEPAVTSPAEENEGGGQKAREVYAHLFADDKAQVL--VSXXXXXXXXXXXXXXXXXXXXRAVIHAVSSTHPKIRYPAGRVGRLPAPFVAFVSWGLPGRVQDVLL 245 A+VN I GG PMET + L+R LE N VG + + Q LP +R RIV +SS+ ++ PL G CASK ALE+ ADA+R EL P+ I + +EPA T + E Q A ++ A + A+ + V+ + V A+++ P RYP VG PA +A ++ LP V DVL+ Sbjct: 73 AVVNNAGIVVGG---PMETIGVDELRRQLEVNVVGQMAVTQAVLPRLRASRGRIVFISSVNGRISTPLLGAYCASKFALEAAADALRMELRPWHIGVHVVEPAQTD-TDLWENAEQTADDLEAAMSAEQRVLYAKHVAGFRKMIPLSRRIAVPVDNVAKVVEEALTAKRPHARYP---VGLSPAVQMAVLN-RLPSSVSDVLV 267
BLAST of NO11G00660 vs. NCBI_GenBank
Match: BAZ30497.1 (short-chain dehydrogenase/reductase SDR [Cylindrospermum sp. NIES-4074]) HSP 1 Score: 91.7 bits (226), Expect = 3.500e-15 Identity = 70/218 (32.11%), Postives = 109/218 (50.00%), Query Frame = 0 Query: 33 SQVKSELEGRAFTALVNT---IEAGGSTSPMETQDLPYLKRLLETNTVGTLGLVQIFLPLIREQGSRIVLMSSLCAHLTPPLFGGLCASKAALESLADAMRRELAPFQISISSIEP-AVTSPAEENEGGGQKAREVYAHLFADDKA--QVLVSXXXXXXXXXXXXXXXXXXXXRAVIHAVSSTHPKIRYPAGRVGRLPAPFVAFVSWGLPGRVQDVLL 245 +++K+ L+ T LVN + AG P+E + L+ E N +G + + Q FLPL+RE RI+ MSS ++ P G CASK ALE+L DA+R EL P+ I++ IEP +VT+P + KA ++ +L + ++ V V +AV HA+++ PKIRY G L A +++ LP + D L+ Sbjct: 74 NRIKATLDSTGLTGLVNNAGIVIAG----PLEFLPVADLREQFEINVIGQIAVTQAFLPLLRESQGRIINMSSDNGKVSIPFLGSYCASKFALEALTDALRIELQPWGIAVCIIEPGSVTTPIWKK--SISKADNIWNNLPPEARSLYSVFVDSAHKKANELSNNGFPAEVVAKAVAHALTTKRPKIRYVVG----LDAKINIWLAKILPDWILDKLI 281
BLAST of NO11G00660 vs. NCBI_GenBank
Match: SNC62708.1 (Short-chain dehydrogenase [Marinobacter sp. es.048]) HSP 1 Score: 91.7 bits (226), Expect = 3.500e-15 Identity = 69/223 (30.94%), Postives = 108/223 (48.43%), Query Frame = 0 Query: 33 SQVKSELEGRAFTALVNTIEAGGSTSPMETQDLPYLKRLLETNTVGTLGLVQIFLPLIREQGSRIVLMSSLCAHLTPPLFGGLCASKAALESLADAMRRELAPFQISISSIEPAV--TSPAEE-----NEGGGQ---KAREVYAHLFADDKAQVLVSXXXXXXXXXXXXXXXXXXXXRAVIHAVSSTHPKIRYPAGRVGRLPAPFVAFVSWGLPGRVQDVLLG 246 +QV ELEGR +V+ G +E + ++++ TNT+G+L L++ +P +R G R+VL++SL + PL G CASK A+ESLAD +RRE + + EP V T E+ NE G+ RE Y +L+ + LVS + A+ S P++RY G ++ V F++W LP R+ D ++G Sbjct: 48 AQVDQELEGRDLKVVVHCAAISG-PGAVEITSVEKFQQVINTNTLGSLRLLKQSIPRLRGHGGRVVLVTSLWGQASGPLLGAYCASKHAIESLADTLRRETRGMNLHVVVAEPGVVQTDMLEDQASFVNEHVGRLPPSMREQYENLYL--RYHKLVS---------TVKGIDTDACSEGLERAMFSAKPRLRYQIGGDSKI----VCFLNWLLPARLMDFVMG 254
BLAST of NO11G00660 vs. NCBI_GenBank
Match: WP_088826645.1 (KR domain-containing protein [Marinobacter sp. es.048]) HSP 1 Score: 91.7 bits (226), Expect = 3.500e-15 Identity = 69/223 (30.94%), Postives = 108/223 (48.43%), Query Frame = 0 Query: 33 SQVKSELEGRAFTALVNTIEAGGSTSPMETQDLPYLKRLLETNTVGTLGLVQIFLPLIREQGSRIVLMSSLCAHLTPPLFGGLCASKAALESLADAMRRELAPFQISISSIEPAV--TSPAEE-----NEGGGQ---KAREVYAHLFADDKAQVLVSXXXXXXXXXXXXXXXXXXXXRAVIHAVSSTHPKIRYPAGRVGRLPAPFVAFVSWGLPGRVQDVLLG 246 +QV ELEGR +V+ G +E + ++++ TNT+G+L L++ +P +R G R+VL++SL + PL G CASK A+ESLAD +RRE + + EP V T E+ NE G+ RE Y +L+ + LVS + A+ S P++RY G ++ V F++W LP R+ D ++G Sbjct: 70 AQVDQELEGRDLKVVVHCAAISG-PGAVEITSVEKFQQVINTNTLGSLRLLKQSIPRLRGHGGRVVLVTSLWGQASGPLLGAYCASKHAIESLADTLRRETRGMNLHVVVAEPGVVQTDMLEDQASFVNEHVGRLPPSMREQYENLYL--RYHKLVS---------TVKGIDTDACSEGLERAMFSAKPRLRYQIGGDSKI----VCFLNWLLPARLMDFVMG 276
BLAST of NO11G00660 vs. NCBI_GenBank
Match: XP_005855962.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >EKU20405.1 short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 91.3 bits (225), Expect = 4.600e-15 Identity = 66/216 (30.56%), Postives = 102/216 (47.22%), Query Frame = 0 Query: 41 GRAFTALVNTIEAGGSTSPMETQDLPYLKRLLETNTVGTLGLVQIFLPLIRE--QGSRIVLMSSLCAHLTPPLFGGLCASKAALESLADAMRRELAPFQISISSIEPA-----VTSPAEEN-----EGGGQKAREVYAHLFADDKAQVLVSXXXXXXXXXXXXXXXXXXXXRAVIHAVSSTHPKIRYPAGRVGRLPAPFVAFVSWGLPGRVQDVLL 245 G F LVN G P+E L + + E N G L + Q FLPL+R+ QG RI+ +SS+ +T PL +K ALE+L+D +R EL +S+S I+P + A+E + ++ +Y HL+ DK L++ RA+ HA++S +PK RY G V PA ++ + W L R+ D ++ Sbjct: 149 GLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLAVTQAFLPLLRQAPQG-RIINVSSMAGIVTRPLGATYSCTKFALEALSDTLRVELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPEECSALYGHLYTVDKTNALIA-----------KASDPIVCSRAIHHALTSPYPKTRYLVGNVNGTPAYWLGWGIWLLNDRLMDRMI 352
BLAST of NO11G00660 vs. NCBI_GenBank
Match: WP_037077487.1 (SDR family oxidoreductase [Pseudonocardia spinosispora]) HSP 1 Score: 91.3 bits (225), Expect = 4.600e-15 Identity = 65/202 (32.18%), Postives = 98/202 (48.51%), Query Frame = 0 Query: 35 VKSELEGRAFTALVNTIEAGGST-SPMETQDLPYLKRLLETNTVGTLGLVQIFLPLIREQGSRIVLMSSLCAHLTPPLFGGLCASKAALESLADAMRRELAPFQISISSIEPAVTSPAEENEGGGQKAREVYA------HLFADDKAQVLVSXXXXXXXXXXXXXXXXXXXXRAVIHAVSSTHPKIRYPAGRVGRLPAPFVA 230 ++S + TALVN AG S P+E + L++ E N +G + + Q FLPL+R G RIV + +T P+ G L ASKAAL+S DA+R E+AP +++S +EP S + G R+ + L+A D A+ + + AV+HA+++ PK RY GR R P +A Sbjct: 67 IESAVGEDGLTALVN--NAGLSVDGPLELIPVARLRQQFEVNVIGQIAVAQAFLPLLRCAGGRIVNIGGAAGSVTLPMLGALSASKAALDSANDALRMEVAPHGVTVSYVEPGALSTQLFVKSAGVIQRDGFTGSPTEHALYAPDLARAMEAMSRQKPAPVGLAVD-------AVVHALTARRPKARYRVGREARFLLPVLA 259
BLAST of NO11G00660 vs. NCBI_GenBank
Match: XP_016612650.1 (hypothetical protein SPPG_00329 [Spizellomyces punctatus DAOM BR117] >KND04611.1 hypothetical protein SPPG_00329 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 90.9 bits (224), Expect = 6.000e-15 Identity = 65/211 (30.81%), Postives = 102/211 (48.34%), Query Frame = 0 Query: 35 VKSEL-EGRAFTALVNTIEAGG--STSPMETQDLPYLKRLLETNTVGTLGLVQIFLPLIREQGSRIVLMSSLCAHLTPPLFGGLCASKAALESLADAMRRELAPFQISISSIEPAVTSPAEENEGGGQ-KAREVYAHLFADDKAQVLVSXXXXXXXXXXXXXXXXXXXXRAVIHAVSSTHPKIRYPAGRVGRLPAPFVAFVSWGLPGRVQD 242 V++EL + + LV + G SP+ET +++ LE N +G + + Q F+PL+RE G R++ +SS + PL GG ASK ALE+L+D++R E+ + +S+S IEP +E Q + HL++ LV+ RA++HA+ +PK RY G R AF+ +P RV D Sbjct: 133 VRAELSQHSSLQPLVAIVNCAGIPCASPIETISSSQMRQCLEVNVIGPVRVCQEFIPLLRESGGRVINVSSAAGFMACPLNGGYAASKMALEALSDSLRVEMQRWGLSVSVIEPGAVDTKLWSECSNQSQLPSPSEHLYSP-----LVTSLKSLTIETRQGLISPRHTTRAILHAIKDRYPKTRYLVGYDARC----AAFMRAWVPDRVLD 334
BLAST of NO11G00660 vs. NCBI_GenBank
Match: WP_035253847.1 (SDR family NAD(P)-dependent oxidoreductase [Desulfatiglans anilini]) HSP 1 Score: 90.5 bits (223), Expect = 7.800e-15 Identity = 83/232 (35.78%), Postives = 106/232 (45.69%), Query Frame = 0 Query: 25 HPLLSLPTSQ--------VKSELEGR-AFTALVNTIEAGGST-SPMETQDLPYLKRLLETNTVGTLGLVQIFLPLIREQGSRIVLMSSLCAHLTPPLFGGLCASKAALESLADAMRRELAPFQISISSIEPAVTSPAEENEGGGQKAREVYAHLFADDKA--QVLVSXXXXXXXXXXXXXXXXXXXXRAVIHAVSSTHPKIRYPAGRVGRLPAPFVAFVSWGLPGRVQDVLL 245 HPLL T V +L G+ A+VN AG S P+E L +R E N VG L ++Q FLPLIR RIV +SS L PL G +SK ALE L D++RREL P+ I +S IEP S A + Q AR + L + + L RAV+HA++S HP+ RY G A VA +S +P R D LL Sbjct: 60 HPLLLDVTDDEQVQAAVAVADQLGGKDGLFAVVN--NAGISVPGPVEYVPLEEFRRAFEVNLVGQLRVIQAFLPLIRRAKGRIVQVSSALGRLAMPLSGPYASSKYALEGLTDSLRRELRPWGIRVSLIEPGSVSSAIWEKIDAQ-ARAIQRALPGEMQKIYAPLAEPMTYIWKEAELRAVSPVIAARAVLHALNSRHPRTRYLVGP----DAYAVAALSRLVPARAMDWLL 284 The following BLAST results are available for this feature:
BLAST of NO11G00660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G00660 ID=NO11G00660|Name=NO11G00660|organism=Nannochloropsis oceanica|type=gene|length=2121bpback to top protein sequence of NO11G00660.2 >NO11G00660.2-protein ID=NO11G00660.2-protein|Name=NO11G00660.2|organism=Nannochloropsis oceanica|type=polypeptide|length=246bpback to top protein sequence of NO11G00660.1 >NO11G00660.1-protein ID=NO11G00660.1-protein|Name=NO11G00660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=329bpback to top Synonyms
Publications
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