NO11G00660, NO11G00660 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G00660 vs. NCBI_GenBank
Match: XP_005855678.1 (short-chain dehydrogenase reductase sdr, partial [Nannochloropsis gaditana CCMP526] >EKU20682.1 short-chain dehydrogenase reductase sdr, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 264.6 bits (675), Expect = 3.000e-67 Identity = 143/222 (64.41%), Postives = 166/222 (74.77%), Query Frame = 0 Query: 33 SQVKSELEGRAFTALVNTIEAGGSTSPMETQDLPYLKRLLETNTVGTLGLVQIFLPLIREQGSRIVLMSSLCAHLTPPLFGGLCASKAALESLADAMRRELAPFQISISSIEPAVTSPAEENEGG---GQKA-------REVYAHLFADDKAQVLVSXXXXXXXXXXXXXXXXXXXXRAVIHAVSSTHPKIRYPAGRVGRLPAPFVAFVSWGLPGRVQDVLL 245 ++VKSEL+GR FTALVNTI+AGG+ SP+E+QDL LKRL + NT GTL +VQ FLPLIRE GSR+VLMSSLCAHLT PLFGGLCASKAALESLADA+RRELA ++IS+SSIEPAV P E EGG G K+ +VYAHLFADDKA+ LVS + VIHAVSSTHPK+RYPAG +G LPA AF+SWGLPGR+QD+LL Sbjct: 122 AKVKSELQGRPFTALVNTIDAGGAISPIESQDLSSLKRLFDINTFGTLAVVQAFLPLIREHGSRLVLMSSLCAHLTSPLFGGLCASKAALESLADALRRELAHYRISVSSIEPAVAFP-EMPEGGKDTGAKSAAAVELDSKVYAHLFADDKARALVSPSANGGEGRRSGTAVAEAVAQVVIHAVSSTHPKLRYPAGYIGHLPASVAAFISWGLPGRMQDLLL 342
BLAST of NO11G00660 vs. NCBI_GenBank
Match: EWM25136.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 264.6 bits (675), Expect = 3.000e-67 Identity = 143/222 (64.41%), Postives = 166/222 (74.77%), Query Frame = 0 Query: 33 SQVKSELEGRAFTALVNTIEAGGSTSPMETQDLPYLKRLLETNTVGTLGLVQIFLPLIREQGSRIVLMSSLCAHLTPPLFGGLCASKAALESLADAMRRELAPFQISISSIEPAVTSPAEENEGG---GQKA-------REVYAHLFADDKAQVLVSXXXXXXXXXXXXXXXXXXXXRAVIHAVSSTHPKIRYPAGRVGRLPAPFVAFVSWGLPGRVQDVLL 245 ++VKSEL+GR FTALVNTI+AGG+ SP+E+QDL LKRL + NT GTL +VQ FLPLIRE GSR+VLMSSLCAHLT PLFGGLCASKAALESLADA+RRELA ++IS+SSIEPAV P E EGG G K+ +VYAHLFADDKA+ LVS + VIHAVSSTHPK+RYPAG +G LPA AF+SWGLPGR+QD+LL Sbjct: 162 AKVKSELQGRPFTALVNTIDAGGAISPIESQDLSSLKRLFDINTFGTLAVVQAFLPLIREHGSRLVLMSSLCAHLTSPLFGGLCASKAALESLADALRRELAHYRISVSSIEPAVAFP-EMPEGGKDTGAKSAAAVELDSKVYAHLFADDKARALVSPSANGGEGRRSGTAVAEAVAQVVIHAVSSTHPKLRYPAGYIGHLPASVAAFISWGLPGRMQDLLL 382
BLAST of NO11G00660 vs. NCBI_GenBank
Match: XP_004990606.1 (oxidoreductase [Salpingoeca rosetta] >EGD77262.1 oxidoreductase [Salpingoeca rosetta]) HSP 1 Score: 108.2 bits (269), Expect = 3.600e-20 Identity = 71/214 (33.18%), Postives = 104/214 (48.60%), Query Frame = 0 Query: 41 GRAFTALVNTIEAGGSTS-PMETQDLPYLKRLLETNTVGTLGLVQIFLPLIREQGSRIVLMSSLCAHLTPPLFGGLCASKAALESLADAMRRELAPFQISISSIEPAVTSPAEENEGGGQKA---------REVYAHLFADDKAQVLVSXXXXXXXXXXXXXXXXXXXXRAVIHAVSSTHPKIRYPAGRVGRLPAPFVAFVSWGLPGRVQDVLL 245 G LVN AG S P+E DL ++ + E N G + + Q FLP+IRE RIV + SL + P A+K LE L DA+RRE+APF +S+S +EPA S A ++ G+ A ++ YA FAD + + L +A+ HA++S P+ RY +PA A ++W LP R+ D++L Sbjct: 105 GHKLIGLVN--NAGISARVPLEAHDLDRIRSMFEVNVFGVVSVTQAFLPMIRENKGRIVNVGSLAGFIAMPGSASYSATKFGLEGLNDALRREMAPFGVSVSIVEPAYVSTAIASKSTGEAAATRWVSREMQDTYAWFFADFEEKRL---------KGEALADGPEVTTKAITHALTSRTPETRYIVANTYGIPAKIAALINWLLPDRLGDIVL 307
BLAST of NO11G00660 vs. NCBI_GenBank
Match: XP_005853543.1 (3-hydroxybutyrate dehydrogenase [Nannochloropsis gaditana CCMP526] >EKU22812.1 3-hydroxybutyrate dehydrogenase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 101.3 bits (251), Expect = 4.400e-18 Identity = 64/222 (28.83%), Postives = 97/222 (43.69%), Query Frame = 0 Query: 33 SQVKSELEGRAFTALVNTIEAGGSTSPMETQDLPYLKRLLETNTVGTLGLVQIFLPLIREQGSRIVLMSSLCAHLTPPLFGGLCASKAALESLADAMRRELAPFQISISSIEPAVTSPA----------EENEGGGQKAREVYAHLFADDKAQVLVSXXXXXXXXXXXXXXXXXXXXRAVIHAVSSTHPKIRYPAGRVGRLPAPFVAFVSWGLPGRVQDVLL 245 S L GR LVN GGS P+E Q + L+ L + N G + + FL L+R R++ +SSL P CASK ALE+ +DA+R E+ +S+S +EPA + A E + +K EVY HL + A++HA+++ HP+ RY V L A + ++ W R++D L+ Sbjct: 109 SSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGKIATRVKETADSVSEKVMEVYGHLVQN----------PTYTRRCIEKASPPTVTSDAILHALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKDKLI 320
BLAST of NO11G00660 vs. NCBI_GenBank
Match: PLY20528.1 (short-chain dehydrogenase/reductase [Nitrospira sp. CG24E]) HSP 1 Score: 101.3 bits (251), Expect = 4.400e-18 Identity = 71/188 (37.77%), Postives = 93/188 (49.47%), Query Frame = 0 Query: 58 SPMETQDLPYLKRLLETNTVGTLGLVQIFLPLIREQGSRIVLMSSLCAHLTPPLFGGLCASKAALESLADAMRRELAPFQISISSIEP-AVTSPAEENEGGGQKAREVYAHLFADDKAQVLVSXXXXXXXXXXXXXXXXXXXXRAVIHAVSSTHPKIRYPAGRVGRLPAPFVAFVSWGLPGRVQDVLL 245 SP+E L L++ LE N +G + + Q FLPL+R+ RIV M S+ T PL G ASK ALE+L DA+R EL P+ I +S IEP A+ +P E E A A V V +AV HA++S+HP+ RY G +L A V W LP R+QD LL Sbjct: 99 SPLEVISLSLLRKQLEVNVIGQIAVTQAFLPLLRQGRGRIVNMGSIAGRGTIPLLGPYSASKFALEALTDALRMELQPWGIQVSIIEPGAIATPIWEKSDMAAGELEASASEEAKALYGVAVVRIREAIVQAAQRAIPPEAVVQAVHHALTSSHPRTRYLVGTDAKLRA---WMVKW-LPDRIQDRLL 282
BLAST of NO11G00660 vs. NCBI_GenBank
Match: PLY29362.1 (short-chain dehydrogenase/reductase [Nitrospira sp. CG24A]) HSP 1 Score: 99.4 bits (246), Expect = 1.700e-17 Identity = 72/192 (37.50%), Postives = 96/192 (50.00%), Query Frame = 0 Query: 58 SPMETQDLPYLKRLLETNTVGTLGLVQIFLPLIREQGSRIVLMSSLCAHLTPPLFGGLCASKAALESLADAMRRELAPFQISISSIEP-AVTSPAEENEGGGQKAREVYAHLFADDKAQVL----VSXXXXXXXXXXXXXXXXXXXXRAVIHAVSSTHPKIRYPAGRVGRLPAPFVAFVSWGLPGRVQDVLL 245 SP+E LP L++ LE N +G + + Q FLPL+R RIV M S+ T PL G ASK ALE+L DA+R EL P+ I +S IEP A+ +P E + E A ++A++L V RAV HA++++ P RY G +L A V W LP RVQD LL Sbjct: 97 SPLEVIPLPQLRKQLEVNVIGQIAVTQAFLPLLRRGRGRIVNMGSIAGRGTIPLLGPYSASKYALEALTDALRMELQPWGIQVSIIEPGAIATPIWEKSAKEAEGLEA----LASEEAKILYGEAVVRIRDAVAQAAQRAIPADAVVRAVHHALTASRPHTRYLVGSDAKLRA---WMVKW-LPDRVQDRLL 280
BLAST of NO11G00660 vs. NCBI_GenBank
Match: EWM21817.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 97.8 bits (242), Expect = 4.900e-17 Identity = 63/222 (28.38%), Postives = 96/222 (43.24%), Query Frame = 0 Query: 33 SQVKSELEGRAFTALVNTIEAGGSTSPMETQDLPYLKRLLETNTVGTLGLVQIFLPLIREQGSRIVLMSSLCAHLTPPLFGGLCASKAALESLADAMRRELAPFQISISSIEPAVTSPA----------EENEGGGQKAREVYAHLFADDKAQVLVSXXXXXXXXXXXXXXXXXXXXRAVIHAVSSTHPKIRYPAGRVGRLPAPFVAFVSWGLPGRVQDVLL 245 S L GR LVN GGS P+E Q + L+ L + N G + + FL L+R R++ +SSL P CASK ALE+ +DA+R E+ +S+S +EPA + A E + +K EVY HL + A++ A+++ HP+ RY V L A + ++ W R++D L+ Sbjct: 109 SSTLDSLGGRPLVGLVNNAGVGGSNKPVEFQSMDDLRWLFDVNFFGAIATTKAFLALLRASKGRVINISSLAGLTVAPFMTDYCASKWALEAFSDALRVEMGELGVSVSVVEPAYVTSAIFGKIATRMKETADSVSEKVMEVYGHLVQN----------PTYTRRCIEKASPPTVTSDAILDALTAKHPQTRYVVANVDGLSAKVIGWMIWMFNDRIKDKLI 320
BLAST of NO11G00660 vs. NCBI_GenBank
Match: PLY28502.1 (short-chain dehydrogenase/reductase [Nitrospira sp. CG24C]) HSP 1 Score: 97.8 bits (242), Expect = 4.900e-17 Identity = 71/190 (37.37%), Postives = 98/190 (51.58%), Query Frame = 0 Query: 58 SPMETQDLPYLKRLLETNTVGTLGLVQIFLPLIREQGSRIVLMSSLCAHLTPPLFGGLCASKAALESLADAMRRELAPFQISISSIEP-AVTSPAEENEGGGQKAREVYAHLFADDKAQV--LVSXXXXXXXXXXXXXXXXXXXXRAVIHAVSSTHPKIRYPAGRVGRLPAPFVAFVSWGLPGRVQDVLL 245 SP+E L +L++ LE N +G + + Q FLPL+R RIV M S+ T PL G ASK ALE+L DA+R EL P+ I +S IEP A+ +P E ++A + A + A+ KA V RAV HA++++ P+ RY G +L A V W LP R+QD LL Sbjct: 114 SPLEVIPLSHLRKQLEVNVIGQIAVTQAFLPLLRRGRGRIVNMGSIAGRGTIPLLGPYSASKYALEALTDALRMELQPWGIQVSIIEPGAIATPIWEK--SAKEAEGLEASVSAEAKALYGEAVIRIREAIAQAAQRAIAPDAVVRAVHHALTASRPRTRYLVGSDAKLRA---WMVKW-LPDRMQDRLL 297
BLAST of NO11G00660 vs. NCBI_GenBank
Match: OAI45180.1 (retinol dehydrogenase [Nitrospira sp. SCGC AG-212-E16]) HSP 1 Score: 97.4 bits (241), Expect = 6.400e-17 Identity = 71/190 (37.37%), Postives = 96/190 (50.53%), Query Frame = 0 Query: 58 SPMETQDLPYLKRLLETNTVGTLGLVQIFLPLIREQGSRIVLMSSLCAHLTPPLFGGLCASKAALESLADAMRRELAPFQISISSIEP-AVTSPAEENEGGGQKAREVYAHLFADDKAQV--LVSXXXXXXXXXXXXXXXXXXXXRAVIHAVSSTHPKIRYPAGRVGRLPAPFVAFVSWGLPGRVQDVLL 245 SP+E LP L++ LE N +G + + Q FLPL+R RIV M S+ T PL G ASK ALE+L DA+R EL P+ I +S IEP A+ +P E ++A ++ A + + KA V RAV HA+++ P RY G +L A V W LP RVQD +L Sbjct: 97 SPLEVIPLPQLRKQLEINVIGQIAVTQAFLPLLRRGRGRIVNMGSIAGRGTIPLLGPYSASKYALEALTDALRMELQPWGIQVSIIEPGAIATPIWEK--SAKEAEDLEASVSEEAKALYGEAVIRIREAITKAAQRAIPPDAVVRAVHHALTAARPHTRYLVGADAKLRA---WMVKW-LPDRVQDRVL 280
BLAST of NO11G00660 vs. NCBI_GenBank
Match: XP_005855590.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >EKU20782.1 short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 94.0 bits (232), Expect = 7.100e-16 Identity = 61/198 (30.81%), Postives = 97/198 (48.99%), Query Frame = 0 Query: 56 STSPMETQDLPYLKRLLETNTVGTLGLVQIFLPLIREQGSRIVLMSSLCAHLTPPLFGGLCASKAALESLADAMRRELAPFQISISSIEP-AVTSPAEENEGGGQKAR--------EVYAHLFADDKAQVLVSXXXXXXXXXXXXXXXXXXXXRAVIHAVSSTHPKIRYPAGRVGRLPAPFVAFVSWGLPGRVQDVLL 245 + S +E D+ ++++ + N G L L Q FLPL+R Q RIV +SS+ LT P G C+SK ALESL+D +R ELA + +S++ ++P AV S E +A+ +VY H+ + +++ +A+ A+ +PK R + LPA F ++ LP RV D +L Sbjct: 122 TASTVEHHDVAGMQKIYDVNVWGVLRLTQKFLPLLRAQAGRIVQISSIAGFLTIPRASGYCSSKHALESLSDGLRLELAHYNVSVTVVQPGAVRSAIFEKSQSASQAKLAEDPRELKVYGHMIKEGSTDSIMA-----------KADTPDCTTKAIRQALMDRYPKTREVVANIDGLPAIFAHYMKHMLPDRVLDKML 308 The following BLAST results are available for this feature:
BLAST of NO11G00660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G00660 ID=NO11G00660|Name=NO11G00660|organism=Nannochloropsis oceanica|type=gene|length=2121bpback to top protein sequence of NO11G00660.2 >NO11G00660.2-protein ID=NO11G00660.2-protein|Name=NO11G00660.2|organism=Nannochloropsis oceanica|type=polypeptide|length=246bpback to top protein sequence of NO11G00660.1 >NO11G00660.1-protein ID=NO11G00660.1-protein|Name=NO11G00660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=329bpback to top Synonyms
Publications
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