NO11G00490, NO11G00490 (gene) Nannochloropsis oceanica

Overview
NameNO11G00490
Unique NameNO11G00490
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2638
Alignment locationchr11:216128..218765 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr11genomechr11:216128..218765 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO11G00490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR067ncniR067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR010ncniR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR018ngnoR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO11G00490.1NO11G00490.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|633906gene_10276Nannochloropsis oceanica (N. oceanica CCMP1779)gene
jgi.p|Nanoce1779_2|647529gene_4909Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO11G00490.1NO11G00490.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO11G00490 ID=NO11G00490|Name=NO11G00490|organism=Nannochloropsis oceanica|type=gene|length=2638bp
ATGGAGGAAAGGAAGCAGGACAGTGTAGAGGAGGAGGGGGAGGAAGAGGC
GGAAGCGTTGGAAGAGGCGGAAGCGTTGACGAGCATGATTTGGGCGCTGG
ATCGGGCACAGGATGAGCTGGATGGAGGGAAGGAGGGAGGGAGGGAGGGA
CTGATGGCGCCCACATTGTTTTGGGAGGAGGTGGGGAAGAGGGCTGTGGT
ATTAATGTTGAAGAGAATGCTTAATCTGCGGTCTCTGGGGCGATTGGTCT
CGACCCTGGTGAGGGGTGGGGGGAAGGGGGGAAGCGAGGAAAGAAAGGAG
GAACGGAGGGGTGGGATGGTAAGCCCGCGGCTGTTGGAGGCGGTGGAGGC
AACGCTCTTGCAGCAGTTGGAGGGAAGGGGGGAGGGAGGGGGGGAGGGGT
TAAGAGGAGGGGAGGTGGCGTTGGTGGTGGATGTCATGAATGCGCTGTCT
GTCCTAGgtgctcccccccctcttcctcttcctcttccttctgtggtccg
gcacctcgtcttgtccaagCTTTTGCTGCTTCGCTGGAGGCGACTGCCGC
CGCTGCTGTAAGCCGCAGCAGCAGCGTTAACGCACACGATTTAGCTGTGG
GACTCAATGCGCTTGTTCGGCTCAAGGAAAAGACAGGCAACAGCGGAAGC
AGCTTTGTCCTTGCTCCCTCTTTCTGGCTCACGTACGAAGAAGCTCTTTG
GGCCCGCATCCCCTCCTCCACCCCCTCCTCCCTCGTCCTCCTCCTCTCCG
CACTCCCCTCTCTCGTCCTGCCCTCTAACCACCGCCTCGACCCCTCCCTC
CTCCGTCGTCTCTCGGAACAAGTAACGGCCCAAATTCAAAAATTTGAAAC
TTCCGGGCTTATTCTCATCCTGGAGTCAATGGCCCGCCTCGGCTACCACC
CGGGTACAGACCTCCTCCCCCTATTTATTGAAAGCCTCCGTGGACGCATG
TTGTCCTCCCTCCTTTCCTCCACCTCGTCCTCCCTCCCTTCCTCCCCGTT
CGGGGCACCGACACCCAAGGGCCTCGCCACGTTGACCCGAGTGCTCCTCC
GGTTCTCGTTTTATCCCGGCCAAGACTTCCTCCTCGCCCTCCATCACGTC
CTTCTTCCTTCCCTGGCCGCCGGCAAGCGCCTGGCCTGGGCTCCTATGGC
TCTAGCTGTCTTCGGCTTCCGCCCTTCCGCCCTCCCTTCCTCCTCCTCCC
CTTCATCAACGGTCGGCGCCTTCCATCGCGCGCTCTACCGAGGGCTGATG
CGGAGGGAAGGAGGGAGAGAGGGAGGGGTAGGGGTGGGAGGGAAGGATCT
CAGAAAGATTCAAACCCTGACGTTGAGCCAATTGGCAGCAATTTTGTGGG
GACTTGCAGCAATGGGGGAGGGAAGGAGGGAAGGAGGGAGGGAGGGAGGG
AGAGATGAGCGGGTCTTTCGACGAGTGCTGTCTGAGGCCTGTCTAAGGTT
GCAGGGACATGGGCCAGGACCTTTCTCGGCACCTGCAGCAGCAGCAGCAG
CAAGGGGAGTATTGGCGGAAAATGAGGAGGAGGGAAGGGGAGGATGCCTA
AAAGTGAAAGGAGACGGAGTAGATGAAGAGGAGATGGTGGAGGGGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAAGTGGTGCCGAGGCTGGAGTGTGACGTGGATGCCCTG
ACGGTCTACTCTCGCTTGAGCCAGGCAGGATTATACTACGCATCGCTGTC
CTCTTCCTCCCTCCCTCCCTTCCTTCCTTCCTCATCCTCCTCGAGACAGC
AGTTGGTCGAGCGGTTCTTAATGCTGGTCCGGAGGTATCGGGAGCAGTGC
TTGGGGGAGGGAGGGGGGCAGGGAGGGATGGAAGAAGGGATGGCGATGAT
GACGACGCCTGAGGCATGGGCCTTGATGAAGAACATGAGGATAGGATTGG
AGGAGAGGGGGTGGAGGTGCGAGGGTGAAGGGGAGGGAGGAGGGGAGGGA
GGGAGGGGGAGGGTGGGGTGGCTTGGAGAGCCGGATTTGGTGATTTTGAA
GCCGGGGAGGGAGGGAGGGAGGGAGGGGGAGGGGGAGGCGATTGCGGTTA
TGGTTGTATCGCCTGGGCAGTACTTTCAAGGTGGCGTTGAATACGACGAG
GAAGAGGAAGGGGAAAGGGAGGGGGAGGGCGGGAAGGAGGGAGGGCGGAA
GTCGTCTTTGATGCGGGTAAGGCCGTTGGGGGCAGCAGCCTTCCGGTGGA
GGGTGCTGAAGAGGGAATGGAGGAGGGGAAAGGTGGTGGTGGTCACCCCC
GAGTCGTGGGAGGCGTTCGTGGGAAGGGAGGGGGTGAAGGAGCGGGAGAG
AAGGGAGGGTGTAGGTCAGGGGAGGGTGGCGCGAGCGTGAGGGAGGGAGG
GGGGGAGGGGGGAGTTGTAGAAATGAGTGGAAGAGCACAAGAGGAGAGAG
GAAATGAAAAATGAGTGTCGGAAGACTCCAAGAAATGGGAAGAGAGATAG
TGCATGAAGGGTGTAAGGAAAAAGAATAGCCAGCATAGACGAGAGCGACT
CTTGCTGCCCTCGTTCTTCAATCGTCACTACGACCACCCGCCACTCGATT
TTCTTTTTTTTTTCCTTCCTCCTCCTCCTCCTCCTCCT
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protein sequence of NO11G00490.1

>NO11G00490.1-protein ID=NO11G00490.1-protein|Name=NO11G00490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=776bp
MEERKQDSVEEEGEEEAEALEEAEALTSMIWALDRAQDELDGGKEGGREG
LMAPTLFWEEVGKRAVVLMLKRMLNLRSLGRLVSTLVRGGGKGGSEERKE
ERRGGMVSPRLLEAVEATLLQQLEGRGEGGGEGLRGGEVALVVDVMNALS
VLAFAASLEATAAAAVSRSSSVNAHDLAVGLNALVRLKEKTGNSGSSFVL
APSFWLTYEEALWARIPSSTPSSLVLLLSALPSLVLPSNHRLDPSLLRRL
SEQVTAQIQKFETSGLILILESMARLGYHPGTDLLPLFIESLRGRMLSSL
LSSTSSSLPSSPFGAPTPKGLATLTRVLLRFSFYPGQDFLLALHHVLLPS
LAAGKRLAWAPMALAVFGFRPSALPSSSSPSSTVGAFHRALYRGLMRREG
GREGGVGVGGKDLRKIQTLTLSQLAAILWGLAAMGEGRREGGREGGRDER
VFRRVLSEACLRLQGHGPGPFSAPAAAAAARGVLAENEEEGRGGCLKVKG
DGVDEEEMVEGEEEEEEEEEEEEEEEEEEEEEEEVVPRLECDVDALTVYS
RLSQAGLYYASLSSSSLPPFLPSSSSSRQQLVERFLMLVRRYREQCLGEG
GGQGGMEEGMAMMTTPEAWALMKNMRIGLEERGWRCEGEGEGGGEGGRGR
VGWLGEPDLVILKPGREGGREGEGEAIAVMVVSPGQYFQGGVEYDEEEEG
EREGEGGKEGGRKSSLMRVRPLGAAAFRWRVLKREWRRGKVVVVTPESWE
AFVGREGVKERERREGVGQGRVARA*
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Synonyms
Publications