NO11G00070, NO11G00070 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G00070 vs. NCBI_GenBank
Match: EWM25215.1 (Forkhead-associated domain containing protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 189.9 bits (481), Expect = 1.000e-43 Identity = 100/140 (71.43%), Postives = 110/140 (78.57%), Query Frame = 0
Query: 88 QHEQVEASMKLPLGTSSPSSLPSSPPVGNVVVIRRNGKDGGHFPLSRGQATIGRHEGCDIRIALPWVSRKHAELRVEEVEEDEE----VVVMLTNYSEVNPTMVNGKKLSKGKKDSTVRLEHGDVFVVADRSFRFEYLQP 224
QHE+VEASMK+P S P+ L +SP VG V+V+RRNGKDGGHFPL+RG ATIGRHE CDIRIALPWVSRKHAELRV + E E VVV LTN+S+VNPT VNG KL KG K T RL HGDVFVVADRSFRFEY P
Sbjct: 8 QHEKVEASMKIP--PSFPAFLSASPCVGKVIVLRRNGKDGGHFPLTRGHATIGRHENCDIRIALPWVSRKHAELRVIDAAEGGEAGHGVVVTLTNFSDVNPTSVNGTKLQKGTK-GTARLRHGDVFVVADRSFRFEYTAP 144
BLAST of NO11G00070 vs. NCBI_GenBank
Match: XP_019635496.1 (PREDICTED: mucin-2-like [Branchiostoma belcheri]) HSP 1 Score: 105.1 bits (261), Expect = 3.300e-18 Identity = 53/106 (50.00%), Postives = 74/106 (69.81%), Query Frame = 0
Query: 115 GNVVVIRRNGKDGGHFPLSRGQATIGRHEGCDIRIALPWVSRKHAELRVEEVEEDEEVVVMLTNYSEVNPTMVNGKKLSKGKKDSTVRLEHGDVFVVADRSFRFEY 221
G +VVI+RNG+DG HFPL+ GR CDIRI LP VSR+H ++ V++ E+ V+L+N S+VNPT++NGK +SK +V ++H DVF + DRSFRFE+
Sbjct: 4 GKIVVIKRNGEDGAHFPLTANTCLFGRTNECDIRIQLPNVSREHCKVDVKDNEQ-----VVLSNLSDVNPTILNGKPVSK-----SVVIQHKDVFTIIDRSFRFEF 99
BLAST of NO11G00070 vs. NCBI_GenBank
Match: XP_013397823.1 (nascent polypeptide-associated complex subunit alpha, muscle-specific form [Lingula anatina] >XP_013397824.1 nascent polypeptide-associated complex subunit alpha, muscle-specific form [Lingula anatina]) HSP 1 Score: 104.0 bits (258), Expect = 7.300e-18 Identity = 54/106 (50.94%), Postives = 69/106 (65.09%), Query Frame = 0
Query: 115 GNVVVIRRNGKDGGHFPLSRGQATIGRHEGCDIRIALPWVSRKHAELRVEEVEEDEEVVVMLTNYSEVNPTMVNGKKLSKGKKDSTVRLEHGDVFVVADRSFRFEY 221
G +VVI+RNG DG HFPL+ IGR CDIRI LP VS++H ++ V ++E + +TN S VNPTMVNG L+K T+ + H DVF V DRSFRFE+
Sbjct: 4 GKIVVIKRNGADGAHFPLTATSCLIGRSNDCDIRIQLPNVSKEHCKIDV-----NQEGQIFVTNLSTVNPTMVNGTSLTK-----TMLIGHNDVFTVIDRSFRFEF 99
BLAST of NO11G00070 vs. NCBI_GenBank
Match: XP_007053101.1 (PREDICTED: antigen KI-67-like [Chelonia mydas]) HSP 1 Score: 102.1 bits (253), Expect = 2.800e-17 Identity = 53/110 (48.18%), Postives = 66/110 (60.00%), Query Frame = 0
Query: 112 PPVGNVVVIRRNGKDGGHFPLSRGQATIGRHEGCDIRIALPWVSRKHAELRVEEVEEDEEVVVMLTNYSEVNPTMVNGKKLSKGKKDSTVRLEHGDVFVVADRSFRFEYL 222
P G +VVI+RNG DG HFPL+ GR CDIRI LP VS++H ++ V E +E +L N S VNPT +NG + L+HGDVF + DRSFRFEYL
Sbjct: 2 PLFGKIVVIKRNGTDGIHFPLTASSCLFGRKTECDIRIQLPQVSKEHCKIEVNENKE-----AILINLSTVNPTQLNGNSFQQ-----PAHLKHGDVFTIVDRSFRFEYL 101
BLAST of NO11G00070 vs. NCBI_GenBank
Match: XP_015262025.1 (PREDICTED: antigen KI-67 [Gekko japonicus]) HSP 1 Score: 101.7 bits (252), Expect = 3.600e-17 Identity = 55/109 (50.46%), Postives = 69/109 (63.30%), Query Frame = 0
Query: 112 PPVGNVVVIRRNGKDGGHFPLSRGQATIGRHEGCDIRIALPWVSRKHAELRVEEVEEDEEVVVMLTNYSEVNPTMVNGKKLSKGKKDSTVRLEHGDVFVVADRSFRFEY 221
P G VVVI+RNG DG HFPL+ T GR + CDIRI LP VS++H ++ EV E++E V L N S VNPT +NG + + L+HGDV + DRSFRFEY
Sbjct: 59 PLFGKVVVIKRNGTDGTHFPLTVNSCTFGRKKECDIRIQLPQVSKEHCKI---EVNENKEAV--LINLSTVNPTQLNGSNFQQ-----PIYLKHGDVLTIIDRSFRFEY 157
BLAST of NO11G00070 vs. NCBI_GenBank
Match: XP_018413316.1 (PREDICTED: antigen KI-67 [Nanorana parkeri]) HSP 1 Score: 101.7 bits (252), Expect = 3.600e-17 Identity = 53/114 (46.49%), Postives = 71/114 (62.28%), Query Frame = 0
Query: 112 PPVGNVVVIRRNGKDGGHFPLSRGQATIGRHEGCDIRIALPWVSRKHAELRVEEVEEDEEVVVMLTNYSEVNPTMVNGKKLSKGKKDSTVRLEHGDVFVVADRSFRFEYLQPQR 226
P G ++VI+R+G DG HFPL+ GR CDIRI LP VS++H ++ V+E E V++TN S VNP +NG L + TVRL+HGD+ + DRSFRFE Q Q+
Sbjct: 2 PCRGKIIVIKRSGADGTHFPLTAATCLFGRKSECDIRIQLPHVSKEHCKVEVKENGE-----VLVTNLSSVNPAQLNGNALKQ-----TVRLKHGDIITIIDRSFRFESPQVQQ 105
BLAST of NO11G00070 vs. NCBI_GenBank
Match: XP_007894292.1 (PREDICTED: antigen KI-67 isoform X1 [Callorhinchus milii]) HSP 1 Score: 101.3 bits (251), Expect = 4.700e-17 Identity = 54/109 (49.54%), Postives = 68/109 (62.39%), Query Frame = 0
Query: 112 PPVGNVVVIRRNGKDGGHFPLSRGQATIGRHEGCDIRIALPWVSRKHAELRVEEVEEDEEVVVMLTNYSEVNPTMVNGKKLSKGKKDSTVRLEHGDVFVVADRSFRFEY 221
P G ++VI+RNG DG HFPL GR CDIRI LP VS++H +L V E E V+L+N S+VN T +NGK + + RL+HGDVF + DRSFRFEY
Sbjct: 2 PLYGQIIVIKRNGADGYHFPLMAPSCLFGRKIDCDIRIQLPHVSKEHCKLEVNENNE-----VILSNLSDVNRTSLNGKVVLHSE-----RLQHGDVFTIIDRSFRFEY 100
BLAST of NO11G00070 vs. NCBI_GenBank
Match: XP_007894299.1 (PREDICTED: antigen KI-67 isoform X2 [Callorhinchus milii]) HSP 1 Score: 101.3 bits (251), Expect = 4.700e-17 Identity = 54/109 (49.54%), Postives = 68/109 (62.39%), Query Frame = 0
Query: 112 PPVGNVVVIRRNGKDGGHFPLSRGQATIGRHEGCDIRIALPWVSRKHAELRVEEVEEDEEVVVMLTNYSEVNPTMVNGKKLSKGKKDSTVRLEHGDVFVVADRSFRFEY 221
P G ++VI+RNG DG HFPL GR CDIRI LP VS++H +L V E E V+L+N S+VN T +NGK + + RL+HGDVF + DRSFRFEY
Sbjct: 2 PLYGQIIVIKRNGADGYHFPLMAPSCLFGRKIDCDIRIQLPHVSKEHCKLEVNENNE-----VILSNLSDVNRTSLNGKVVLHSE-----RLQHGDVFTIIDRSFRFEY 100
BLAST of NO11G00070 vs. NCBI_GenBank
Match: KFQ78731.1 (Antigen KI-67, partial [Phoenicopterus ruber ruber]) HSP 1 Score: 101.3 bits (251), Expect = 4.700e-17 Identity = 55/109 (50.46%), Postives = 67/109 (61.47%), Query Frame = 0
Query: 112 PPVGNVVVIRRNGKDGGHFPLSRGQATIGRHEGCDIRIALPWVSRKHAELRVEEVEEDEEVVVMLTNYSEVNPTMVNGKKLSKGKKDSTVRLEHGDVFVVADRSFRFEY 221
P GN+VVI+RNG DG FPL+ GR CDIRI LP VS++H ++ V E +E +LTN S VNPT +NG G V L+HGDVF + DRSFRFEY
Sbjct: 2 PLFGNIVVIKRNGTDGISFPLTASSCLFGRRTECDIRIQLPQVSKEHCKVEVNENKE-----AILTNLSTVNPTKLNG-----GCFQQPVPLKHGDVFTIIDRSFRFEY 100
BLAST of NO11G00070 vs. NCBI_GenBank
Match: XP_013041244.1 (PREDICTED: antigen KI-67 [Anser cygnoides domesticus]) HSP 1 Score: 101.3 bits (251), Expect = 4.700e-17 Identity = 53/109 (48.62%), Postives = 66/109 (60.55%), Query Frame = 0
Query: 112 PPVGNVVVIRRNGKDGGHFPLSRGQATIGRHEGCDIRIALPWVSRKHAELRVEEVEEDEEVVVMLTNYSEVNPTMVNGKKLSKGKKDSTVRLEHGDVFVVADRSFRFEY 221
P G ++VI+RNG DG HFPL+ GR CDIRI LP VS++H ++ V E EE +LTN S VNPT +NG + V L+HGDV + DRSFRFEY
Sbjct: 2 PLFGKIIVIKRNGTDGIHFPLTASSCLFGRRTECDIRIQLPQVSKEHCKIEVNENEE-----AILTNLSTVNPTQLNGSCFQQ-----PVPLKHGDVLTIIDRSFRFEY 100 The following BLAST results are available for this feature:
BLAST of NO11G00070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G00070 ID=NO11G00070|Name=NO11G00070|organism=Nannochloropsis oceanica|type=gene|length=10347bpback to top protein sequence of NO11G00070.1 >NO11G00070.1-protein ID=NO11G00070.1-protein|Name=NO11G00070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=2617bpback to top Synonyms
Publications
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