jgi.p|Nanoce1779_2|634153, gene_10717 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|634153
Unique Name	gene_10717
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Alignment location	scaffold_58:74096..82382 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	634239
ProteinId	634153
Product name	hypothetical protein
Portal id	Nanoce1779_2

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_58	supercontig	scaffold_58:74096..82382 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE164714	2022-03-15
PRJNA285666	2019-07-03
PRJNA157867	2019-07-02
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
ncniL081	ncniL081	Nannochloropsis oceanica (N. oceanica CCMP1779)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO11G00070	NO11G00070	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|634153	mRNA_10717-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|634153	mRNA_10717	Nannochloropsis oceanica (N. oceanica CCMP1779)	mRNA

Sequences

The following sequences are available for this feature:

protein sequence

protein sequence of jgi.p|Nanoce1779_2|634153

>mRNA_10717-protein ID=mRNA_10717-protein|Name=jgi.p|Nanoce1779_2|634153|organism=Nannochloropsis oceanica|type=polypeptide|length=1496bp
MLAAIASQHEQVEASMKLPLGTSSPSSLPSSPPVGNVVVIRRNGKDGGHF
PLSRGQATIGRHEGCDIRIALPWVSRKHAELRVEEVEEDEEVVVMLTNYS
EVNPTMVNGKKLSKGKKDSTVRLEHGDVFVVADRSFRFEYLQPQREEGGR
EEEIREEEDSDATQLMNDVAAAKRAALGFGAGGGGGRPGVKVEPMPTPLK
RAIQARRQSYTPFPLPCSLPASLSDSVTPGEGNKNSSSRLPTPLRSAIDA
RRKSYSDQQVLKEKGEEKEEEENKETGQRMEARRSSSVAAPVYEDEKEQE
QEQEEEEEEKQEWREEEMEVRRNRLATPLRSAIDARRQSYSNQQVVEEEE
EEEERGVEVRRNRLATPLRSAIDARRQSYSNQQVVEEEEGEERGVEVRRN
RLATPLRSAIDARRQSYSNQQVVEEEEGEERGVEVRRNRLATPLRSAIDA
RRQSYSNQQVVEEEEGEERGVEVRRNRLATPLRSAIDARRQSYSNQQVVE
EEEEEKAREEGRNRLATPLRSAIDARRQSYSNQQVVEEEEEEKAREEGRN
RLATPLRSAIDARRQSYSNQQVVEGEEGEERGVEVRRNRLATPLRSAIDA
RRQSYSNQQVVEEEEEEEEERGVEVRRNRLATPLRSAIDARRQSYSNHQV
VEEEEGEERGVEVRRNRLASPLRSAIDARRQSYSNQQVVEEEEGEERGVE
VRRNRLATPLRSAIDARRQSYSNHQVVEEEEGEERGVEVRRNRLATPLRS
AIDARRQSYSNQQVVEEEEEEKAREEGRNRLATPLRSAIDARRQSYSNQQ
VVEGEEGEERGVEVRRNRLATPLRSAIDARRQSYSNHQVVEEEEGEERGV
EVRRNRLATPLRSAIDARRQSYSNQQVVEEEEEEKAREEGRNRLATPLRS
AIDARRQSYSNQQVVEGEEGEERGVEVRRNRLATPLRSAIDARRQSYSNH
QVVEEEEGEERGVEVRRNRLATPLRSAIDARRQSYSNQQVVEEEEEEKAR
EEGRNRLATPLRSAIDARRQSHSSVSAPVYEEMEGEEREEDAFDAQRNMT
VTPAAPRTRPPSRPPALPTPVRSAIQARRTSSSSSTSMTTPLKKTQAGSR
SAAAAPGAVAPRSAMPTPLRQAISTRRVSSLTPQREEGREEAVEEQEQQY
LQQITLTPAGPRPPRRTVLRGSDKEDAFAAQRALALTPMGPRPPRRTAVA
AAEEEEEEEEDAFGAQRGMTLTPAAPRGRREGGRKEKMASPLARAIHARR
QSYSGVEEKEEEEEAKAIEAGDRTRDEEDEEEEEEEVALGASGTGSAMQE
ARRLSASGGEGGREEGSEGRKMLRMPTPLRRAIQCRRLSYTTTTTAGAAV
SAEEEEEQEEEGEVEEDAFLAQREMALTPSLHVKKGMINRRVMAKGGVGA
TARVLVVGEKDGPAAVTGPMSLSNADEAEEEDEEEEEEEEEGEEEGEQQQ
EEAGEPRRRSLLEELGQPRLIQENDEAARSEERGDGEEDDEVCFG*

Synonyms

Publications