NO10G03850, NO10G03850 (gene) Nannochloropsis oceanica

Overview
NameNO10G03850
Unique NameNO10G03850
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1501
Alignment locationchr10:1124745..1126245 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:1124745..1126245 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO10G03850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR016ngnoR016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001242NSK001242Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G03850.1NO10G03850.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670082gene_3822Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G03850.1NO10G03850.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G03850 ID=NO10G03850|Name=NO10G03850|organism=Nannochloropsis oceanica|type=gene|length=1501bp
ATGGTGCTGGTTGATGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGGAGG
GATCCCGTGGTGGAGAGCTTCGGGGCACTCAAAGCCACCATTGCGAAGCC
TCGAAGAGGAGGACGACGAGGAGGAAGGGAGGGGGGAAGGAAGGGAGGAG
GGAAAAGAGGGAAGGAGGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGAGG
GAAGGAGGGAGGAGCAAGGGAGGAAGGGAGGTTGCATGCGGGGAAAGAGG
AAAGGGAGGTTGGTGGGGGAGAAGTGGAGGAGGAGGAGGGAGATACGTCC
CCGGGAGAGGTCGATCTCTTCATGGATAGTGACCGCCATTTGGAGGGGGA
AGAAGAGGAAGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGACA
GGGAGGAGATGGCAAGTGCATTTTTGCCTGTTTCTGACGCGAGGCTATTA
CCGGCTTTCTCGCCTTCGCACTCTTCCTCGTCCTCTTCCTTCTCCTCCAC
TGCCACAAAGATTGACCCTACTACTGCTTCGATGGTAGCTGTAGCAGCAG
CAGCAGCAGCAGCAGTAGCAGGAAGGGGTGGCGCAAGAGAGGGAGAGTAT
GAGGACGAGGTTGAGGACGAGGAAGCGACGAGGGCCATGCCTGATCCTCC
GTTTGTGATGAGGGAGGTGCTGCAATTGTTCATCAACGAGGGGACGAGGC
AAGAGCCCACCGTGGTGGTCGACTGgtggggagggagggagggagggagg
gagggagggagggagggagggagggtgggtataggaggaaaggaatgttg
agttttcttgcttccctccctcttcctcgtctcgctcgacactaatccct
ccctcccttcctccttcccaccttcgtctttccagCCAAGGCGAGATGAT
TCAAATTCTACCTCTCTCTTATGTGAAGGCACATGCCCCCTCCCTCCTCC
TCGCTTTCCTCACGGCCGAGGCCCTTGAGACGCGAAGACGACAGCAGACA
AGCAGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCGGAGAAGGAGAAGGAG
GAGAGGAAGGAGCAGGAAGAGGGAGGGTTGAAAGTCGAGACGCGGTTGCA
GAAACGGATGCGCCTGGAGAAGGAGCGAGAGGAGCACCAGCTGCTGCAGC
AGAAGGAGCTAAGTGAGAGAGTAAGGGAAATGGAAGTCGCGGAGGAGTTG
GATAGCAATCACCACCACCACCAGCAGCAGCAGCAGCTGTAGTAGTAGAT
GTAGTAGCAGCTGTAATAGTAGATGCTTGAGGAGAGAAATGGGCGGGAGG
GGGAAGGGGAAGGAGGAGGAGGAGGAGAAGGAGGAGAAGGAAGAGGAAGA
AGAGGAAGAAGAGGAGGAAGAGGAGGAGGATATATATAAATATATATATA
T
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protein sequence of NO10G03850.1

>NO10G03850.1-protein ID=NO10G03850.1-protein|Name=NO10G03850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=394bp
MVLVDEEEEEEEEEEGGIPWWRASGHSKPPLRSLEEEDDEEEGRGEGREE
GKEGRREGGKEGGKEGGKEGGAREEGRLHAGKEEREVGGGEVEEEEGDTS
PGEVDLFMDSDRHLEGEEEEEEGREGGREGGRDREEMASAFLPVSDARLL
PAFSPSHSSSSSSFSSTATKIDPTTASMVAVAAAAAAAVAGRGGAREGEY
EDEVEDEEATRAMPDPPFVMREVLQLFINEGTRQEPTVVVDCQGEMIQIL
PLSYVKAHAPSLLLAFLTAEALETRRRQQTSREEEEEEEEEEEEEEEEEE
EEEEEEEEEEEEEEEEEEEEEEEEAEKEKEERKEQEEGGLKVETRLQKRM
RLEKEREEHQLLQQKELSERVREMEVAEELDSNHHHHQQQQQL*
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Synonyms
Publications