NO10G03850.1, NO10G03850.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO10G03850.1
Unique NameNO10G03850.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1341
Alignment locationchr10:1124745..1126245 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:1124745..1126245 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO10G03850.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G03850NO10G03850Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO10G03850.1NO10G03850.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO10G03850.1.cds1NO10G03850.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO10G03850.1.cds2NO10G03850.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO10G03850.1 ID=NO10G03850.1|Name=NO10G03850.1|organism=Nannochloropsis oceanica|type=mRNA|length=1341bp
ATGGTGCTGGTTGATGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGGAGG
GATCCCGTGGTGGAGAGCTTCGGGGCACTCAAAGCCACCATTGCGAAGCC
TCGAAGAGGAGGACGACGAGGAGGAAGGGAGGGGGGAAGGAAGGGAGGAG
GGAAAAGAGGGAAGGAGGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGAGG
GAAGGAGGGAGGAGCAAGGGAGGAAGGGAGGTTGCATGCGGGGAAAGAGG
AAAGGGAGGTTGGTGGGGGAGAAGTGGAGGAGGAGGAGGGAGATACGTCC
CCGGGAGAGGTCGATCTCTTCATGGATAGTGACCGCCATTTGGAGGGGGA
AGAAGAGGAAGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGACA
GGGAGGAGATGGCAAGTGCATTTTTGCCTGTTTCTGACGCGAGGCTATTA
CCGGCTTTCTCGCCTTCGCACTCTTCCTCGTCCTCTTCCTTCTCCTCCAC
TGCCACAAAGATTGACCCTACTACTGCTTCGATGGTAGCTGTAGCAGCAG
CAGCAGCAGCAGCAGTAGCAGGAAGGGGTGGCGCAAGAGAGGGAGAGTAT
GAGGACGAGGTTGAGGACGAGGAAGCGACGAGGGCCATGCCTGATCCTCC
GTTTGTGATGAGGGAGGTGCTGCAATTGTTCATCAACGAGGGGACGAGGC
AAGAGCCCACCGTGGTGGTCGACTGCCAAGGCGAGATGATTCAAATTCTA
CCTCTCTCTTATGTGAAGGCACATGCCCCCTCCCTCCTCCTCGCTTTCCT
CACGGCCGAGGCCCTTGAGACGCGAAGACGACAGCAGACAAGCAGGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGCGGAGAAGGAGAAGGAGGAGAGGAAGG
AGCAGGAAGAGGGAGGGTTGAAAGTCGAGACGCGGTTGCAGAAACGGATG
CGCCTGGAGAAGGAGCGAGAGGAGCACCAGCTGCTGCAGCAGAAGGAGCT
AAGTGAGAGAGTAAGGGAAATGGAAGTCGCGGAGGAGTTGGATAGCAATC
ACCACCACCACCAGCAGCAGCAGCAGCTGTAGTAGTAGATGTAGTAGCAG
CTGTAATAGTAGATGCTTGAGGAGAGAAATGGGCGGGAGGGGGAAGGGGA
AGGAGGAGGAGGAGGAGAAGGAGGAGAAGGAAGAGGAAGAAGAGGAAGAA
GAGGAGGAAGAGGAGGAGGATATATATAAATATATATATAT
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protein sequence of NO10G03850.1

>NO10G03850.1-protein ID=NO10G03850.1-protein|Name=NO10G03850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=394bp
MVLVDEEEEEEEEEEGGIPWWRASGHSKPPLRSLEEEDDEEEGRGEGREE
GKEGRREGGKEGGKEGGKEGGAREEGRLHAGKEEREVGGGEVEEEEGDTS
PGEVDLFMDSDRHLEGEEEEEEGREGGREGGRDREEMASAFLPVSDARLL
PAFSPSHSSSSSSFSSTATKIDPTTASMVAVAAAAAAAVAGRGGAREGEY
EDEVEDEEATRAMPDPPFVMREVLQLFINEGTRQEPTVVVDCQGEMIQIL
PLSYVKAHAPSLLLAFLTAEALETRRRQQTSREEEEEEEEEEEEEEEEEE
EEEEEEEEEEEEEEEEEEEEEEEEAEKEKEERKEQEEGGLKVETRLQKRM
RLEKEREEHQLLQQKELSERVREMEVAEELDSNHHHHQQQQQL*
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mRNA from alignment at chr10:1124745..1126245-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO10G03850.1 ID=NO10G03850.1|Name=NO10G03850.1|organism=Nannochloropsis oceanica|type=mRNA|length=1501bp|location=Sequence derived from alignment at chr10:1124745..1126245- (Nannochloropsis oceanica)
ATGGTGCTGGTTGATGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGGAGG GATCCCGTGGTGGAGAGCTTCGGGGCACTCAAAGCCACCATTGCGAAGCC TCGAAGAGGAGGACGACGAGGAGGAAGGGAGGGGGGAAGGAAGGGAGGAG GGAAAAGAGGGAAGGAGGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGAGG GAAGGAGGGAGGAGCAAGGGAGGAAGGGAGGTTGCATGCGGGGAAAGAGG AAAGGGAGGTTGGTGGGGGAGAAGTGGAGGAGGAGGAGGGAGATACGTCC CCGGGAGAGGTCGATCTCTTCATGGATAGTGACCGCCATTTGGAGGGGGA AGAAGAGGAAGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGACA GGGAGGAGATGGCAAGTGCATTTTTGCCTGTTTCTGACGCGAGGCTATTA CCGGCTTTCTCGCCTTCGCACTCTTCCTCGTCCTCTTCCTTCTCCTCCAC TGCCACAAAGATTGACCCTACTACTGCTTCGATGGTAGCTGTAGCAGCAG CAGCAGCAGCAGCAGTAGCAGGAAGGGGTGGCGCAAGAGAGGGAGAGTAT GAGGACGAGGTTGAGGACGAGGAAGCGACGAGGGCCATGCCTGATCCTCC GTTTGTGATGAGGGAGGTGCTGCAATTGTTCATCAACGAGGGGACGAGGC AAGAGCCCACCGTGGTGGTCGACTGGTGGGGAGGGAGGGAGGGAGGGAGG GAGGGAGGGAGGGAGGGAGGGAGGGTGGGTATAGGAGGAAAGGAATGTTG AGTTTTCTTGCTTCCCTCCCTCTTCCTCGTCTCGCTCGACACTAATCCCT CCCTCCCTTCCTCCTTCCCACCTTCGTCTTTCCAGCCAAGGCGAGATGAT TCAAATTCTACCTCTCTCTTATGTGAAGGCACATGCCCCCTCCCTCCTCC TCGCTTTCCTCACGGCCGAGGCCCTTGAGACGCGAAGACGACAGCAGACA AGCAGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA GGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG AAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCGGAGAAGGAGAAGGAG GAGAGGAAGGAGCAGGAAGAGGGAGGGTTGAAAGTCGAGACGCGGTTGCA GAAACGGATGCGCCTGGAGAAGGAGCGAGAGGAGCACCAGCTGCTGCAGC AGAAGGAGCTAAGTGAGAGAGTAAGGGAAATGGAAGTCGCGGAGGAGTTG GATAGCAATCACCACCACCACCAGCAGCAGCAGCAGCTGTAGTAGTAGAT GTAGTAGCAGCTGTAATAGTAGATGCTTGAGGAGAGAAATGGGCGGGAGG GGGAAGGGGAAGGAGGAGGAGGAGGAGAAGGAGGAGAAGGAAGAGGAAGA AGAGGAAGAAGAGGAGGAAGAGGAGGAGGATATATATAAATATATATATA T
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Coding sequence (CDS) from alignment at chr10:1124745..1126245-

>NO10G03850.1 ID=NO10G03850.1|Name=NO10G03850.1|organism=Nannochloropsis oceanica|type=CDS|length=1182bp|location=Sequence derived from alignment at chr10:1124745..1126245- (Nannochloropsis oceanica)
ATGGTGCTGGTTGATGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGGAGG
GATCCCGTGGTGGAGAGCTTCGGGGCACTCAAAGCCACCATTGCGAAGCC
TCGAAGAGGAGGACGACGAGGAGGAAGGGAGGGGGGAAGGAAGGGAGGAG
GGAAAAGAGGGAAGGAGGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGAGG
GAAGGAGGGAGGAGCAAGGGAGGAAGGGAGGTTGCATGCGGGGAAAGAGG
AAAGGGAGGTTGGTGGGGGAGAAGTGGAGGAGGAGGAGGGAGATACGTCC
CCGGGAGAGGTCGATCTCTTCATGGATAGTGACCGCCATTTGGAGGGGGA
AGAAGAGGAAGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGACA
GGGAGGAGATGGCAAGTGCATTTTTGCCTGTTTCTGACGCGAGGCTATTA
CCGGCTTTCTCGCCTTCGCACTCTTCCTCGTCCTCTTCCTTCTCCTCCAC
TGCCACAAAGATTGACCCTACTACTGCTTCGATGGTAGCTGTAGCAGCAG
CAGCAGCAGCAGCAGTAGCAGGAAGGGGTGGCGCAAGAGAGGGAGAGTAT
GAGGACGAGGTTGAGGACGAGGAAGCGACGAGGGCCATGCCTGATCCTCC
GTTTGTGATGAGGGAGGTGCTGCAATTGTTCATCAACGAGGGGACGAGGC
AAGAGCCCACCGTGGTGGTCGACTGCCAAGGCGAGATGATTCAAATTCTA
CCTCTCTCTTATGTGAAGGCACATGCCCCCTCCCTCCTCCTCGCTTTCCT
CACGGCCGAGGCCCTTGAGACGCGAAGACGACAGCAGACAAGCAGGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGCGGAGAAGGAGAAGGAGGAGAGGAAGG
AGCAGGAAGAGGGAGGGTTGAAAGTCGAGACGCGGTTGCAGAAACGGATG
CGCCTGGAGAAGGAGCGAGAGGAGCACCAGCTGCTGCAGCAGAAGGAGCT
AAGTGAGAGAGTAAGGGAAATGGAAGTCGCGGAGGAGTTGGATAGCAATC
ACCACCACCACCAGCAGCAGCAGCAGCTGTAG
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Synonyms
Publications