NO10G03160, NO10G03160 (gene) Nannochloropsis oceanica

Overview
NameNO10G03160
Unique NameNO10G03160
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4066
Alignment locationchr10:887043..891108 +

Link to JBrowse

Properties
Property NameValue
DescriptionTranslation initiation factor if-2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:887043..891108 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR009000Transl_B-barrel
IPR036925TIF_IF2_dom3_sf
IPR015760TIF_IF2
IPR023115TIF_IF2_dom3
IPR000795TF_GTP-bd_dom
Homology
[Close]
BLAST of NO10G03160 vs. NCBI_GenBank
Match: EWM25537.1 (translation initiation factor if-2 [Nannochloropsis gaditana])

HSP 1 Score: 897.1 bits (2317), Expect = 5.900e-257
Identity = 511/826 (61.86%), Postives = 602/826 (72.88%), Query Frame = 0 
Query:  407 GRWSLPQVADAGTPTAPLSPPSQVSAPMAEPGQVRMWEIELSNRVTPAPRIPFPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRLDRRLKALQTMPLVLPREPLSVRDLSQRLSMKMNEVMKRLVSLGGKEEYGEVGPETIVDLDVAELLGLEMGRLVKRVDTKADLVGHWGE----REGAKKGWPFRAPVVCVMGHVDHGKTTLLDALRRSRVAQAEAGGITQRLGAFHIASAAGGENGKEGDLGVTVLDTPGHAAFGAMRAHGAQATDIVLLVVSAVDGLQEQTKEIVRLLAEQ--KEEVEXXXXXEGMAGP--------SLMVAVTKVDKLGGKEEVDAAMGKIVHALAAEGVMCEGLGGDVQVVPVSAPTGEGLEELMERLQLQAEMLELRASREGPGEGVVLDAYMDRGLGAVTNVLMRWGALSPGDVVVAGTQWGRVKRILGEDQNAGSSNSSEGLEQALPSMPVRLLGLKTLPTPGEALMVVKSEERAQAVVEARMAAKERQRYEEMEETEAMGMEDQIQLAEILEKNLVGGHRSGKKTKAFLALQRGLVDDVLESSPMRKDGGXXXXXXXXXXXQVVVPFLVKADGKGTLEALTSALAGYDSDVIKAEVIGMGCGPVTEGDVERAKAAAARACDGGGEACTILAFNVGFVNGEVGEMARREGVSVKRQEVIYTLLDDVKATLQDHMPMERVETSVGRMEVQATFALTGRRKARNTVAGCKVLSGAAFSGSQYRYRVMRKEEGREEGVVVCDESPPATLYHFKEQVQEVKKGSECGLSLDGFGAFEAGDLIECYTVTMKPKQIGEIFRY 1219
            GRW        G P    + P+ VS   AE   VR+WE++L  R + + R P  SR                        XXXXXXXXXXXX       +ALQ +PLVLP EP++VR+L+Q+LS+KM +V +R++ LGG EEY    PET VDLDVAEL+GLE+GR VKR+    +L+ +       R G +  WP R PVVCVMGHVDHGKTTLLDALR+SRVA AEAGGITQRLGAFHI     GE G+EG LG+TVLDTPGHAAF AMR HGA ATDIVLLVVSA DGLQEQT E++R+L EQ  +EE +      G  G         SLMVAVTKVDKL G+EEV  A+ KI HALAA G+M E LGGDVQVVPVSA TG GL +L++R++LQAEMLELRA REGPGEGV+LDA M++GLG V +VLMRWG+L+PGDVVVAG QWGRVK+ILG   + G       +++ALPSMPVR+LGL+ LPTPG+ ++VVKSEERA+AV +A               TE +G E+Q QL EIL+KNLVG +  GKKTKA+LALQRG VDD+L+S+  +++GG            VVVPFLVKADGKGTL+A+T+ALA Y+ D I+ EVIG GCGPVTEGDVE+AK  AAR CDGGGEACTILAFNVGFVN EVGEMARREGV VK+++VIYTLL+  KATLQ+HMP ERVETSVG+MEVQA F LTG+R+ARNTVAGCKV+SG  FSG QYRYRVMR       G VVC ESPPATLYHFKEQVQEVKKG ECGL+L+GFGAFEAGD+IECYTVT K + I E+F Y
Sbjct:  328 GRW--------GAPATAAAAPAAVSPIGAE--HVRLWEVDLGERKSASSRAPVLSR----------EESHENQKIRSQELXXXXXXXXXXXXXXXXXXXRALQRVPLVLPHEPIAVRELAQKLSLKMKDVGERVLRLGGSEEYYNWNPETKVDLDVAELVGLELGRTVKRMAPPENLLEYRSRVREGRGGRRVEWPLRPPVVCVMGHVDHGKTTLLDALRQSRVAAAEAGGITQRLGAFHIPGV--GEGGEEGGLGITVLDTPGHAAFRAMRMHGALATDIVLLVVSATDGLQEQTLEVLRMLEEQWAEEEEDFCMQRGGEGGKMEGFSPSLSLMVAVTKVDKLHGEEEVQTALYKIEHALAAHGIMSEALGGDVQVVPVSAVTGAGLPDLLDRVRLQAEMLELRADREGPGEGVILDAGMEKGLGMVMSVLMRWGSLAPGDVVVAGEQWGRVKKILGARNSPGGP-----VDRALPSMPVRVLGLRDLPTPGQEVIVVKSEERAEAVAKAXXXXXXXXXXXXXAATEVLGEEEQEQLQEILDKNLVGANVGGKKTKAYLALQRGAVDDLLDSASAKREGG--------QEGPVVVPFLVKADGKGTLDAVTAALAAYEHDTIRTEVIGTGCGPVTEGDVEKAKGVAARECDGGGEACTILAFNVGFVNAEVGEMARREGVRVKKEDVIYTLLEQTKATLQEHMPWERVETSVGKMEVQAMFTLTGKRRARNTVAGCKVVSGGVFSGQQYRYRVMR------GGEVVCKESPPATLYHFKEQVQEVKKGQECGLALEGFGAFEAGDVIECYTVTEKQRSIAEVFPY 1112
[Close]
BLAST of NO10G03160 vs. NCBI_GenBank
Match: XP_005854583.1 (translation initiation factor if-2 [Nannochloropsis gaditana CCMP526] >EKU21776.1 translation initiation factor if-2 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 893.3 bits (2307), Expect = 8.600e-256
Identity = 509/822 (61.92%), Postives = 599/822 (72.87%), Query Frame = 0 
Query:  407 GRWSLPQVADAGTPTAPLSPPSQVSAPMAEPGQVRMWEIELSNRVTPAPRIPFPSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRLDRRLKALQTMPLVLPREPLSVRDLSQRLSMKMNEVMKRLVSLGGKEEYGEVGPETIVDLDVAELLGLEMGRLVKRVDTKADLVGHWGE----REGAKKGWPFRAPVVCVMGHVDHGKTTLLDALRRSRVAQAEAGGITQRLGAFHIASAAGGENGKEGDLGVTVLDTPGHAAFGAMRAHGAQATDIVLLVVSAVDGLQEQTKEIVRLLAEQ--KEEVEXXXXXEGMAGP--------SLMVAVTKVDKLGGKEEVDAAMGKIVHALAAEGVMCEGLGGDVQVVPVSAPTGEGLEELMERLQLQAEMLELRASREGPGEGVVLDAYMDRGLGAVTNVLMRWGALSPGDVVVAGTQWGRVKRILGEDQNAGSSNSSEGLEQALPSMPVRLLGLKTLPTPGEALMVVKSEERAQAVVEARMAAKERQRYEEMEETEAMGMEDQIQLAEILEKNLVGGHRSGKKTKAFLALQRGLVDDVLESSPMRKDGGXXXXXXXXXXXQVVVPFLVKADGKGTLEALTSALAGYDSDVIKAEVIGMGCGPVTEGDVERAKAAAARACDGGGEACTILAFNVGFVNGEVGEMARREGVSVKRQEVIYTLLDDVKATLQDHMPMERVETSVGRMEVQATFALTGRRKARNTVAGCKVLSGAAFSGSQYRYRVMRKEEGREEGVVVCDESPPATLYHFKEQVQEVKKGSECGLSLDGFGAFEAGDLIECYTVTMKPKQIGE 1215
            GRW        G P    + P+ VS   AE   VR+WE++L  R + + R P  SR                        XXXXXXXXXXXX       +ALQ +PLVLP EP++VR+L+Q+LS+KM +V +R++ LGG EEY    PET VDLDVAEL+GLE+GR VKR+    +L+ +       R G +  WP R PVVCVMGHVDHGKTTLLDALR+SRVA AEAGGITQRLGAFHI     GE G+EG LG+TVLDTPGHAAF AMR HGA ATDIVLLVVSA DGLQEQT E++R+L EQ  +EE +      G  G         SLMVAVTKVDKL G+EEV  A+ KI HALAA G+M E LGGDVQVVPVSA TG GL +L++R++LQAEMLELRA REGPGEGV+LDA M++GLG V +VLMRWG+L+PGDVVVAG QWGRVK+ILG   + G       +++ALPSMPVR+LGL+ LPTPG+ ++VVKSEERA+AV +A               TE +G E+Q QL EIL+KNLVG +  GKKTKA+LALQRG VDD+L+S+  +++GG            VVVPFLVKADGKGTL+A+T+ALA Y+ D I+ EVIG GCGPVTEGDVE+AK  AAR CDGGGEACTILAFNVGFVN EVGEMARREGV VK+++VIYTLL+  KATLQ+HMP ERVETSVG+MEVQA F LTG+R+ARNTVAGCKV+SG  FSG QYRYRVMR       G VVC ESPPATLYHFKEQVQEVKKG ECGL+L+GFGAFEAGD+IECYTVT K + I E
Sbjct:  298 GRW--------GAPATAAAAPAAVSPIGAE--HVRLWEVDLGERKSASSRAPVLSR----------EESHENQKIRSQELXXXXXXXXXXXXXXXXXXXRALQRVPLVLPHEPIAVRELAQKLSLKMKDVGERVLRLGGSEEYYNWNPETKVDLDVAELVGLELGRTVKRMAPPENLLEYRSRVREGRGGRRVEWPLRPPVVCVMGHVDHGKTTLLDALRQSRVAAAEAGGITQRLGAFHIPGV--GEGGEEGGLGITVLDTPGHAAFRAMRMHGALATDIVLLVVSATDGLQEQTLEVLRMLEEQWAEEEEDFCMQRGGEGGKMEGFSPSLSLMVAVTKVDKLHGEEEVQTALSKIEHALAAHGIMSEALGGDVQVVPVSAVTGAGLPDLLDRVRLQAEMLELRADREGPGEGVILDAGMEKGLGMVMSVLMRWGSLAPGDVVVAGEQWGRVKKILGARNSPGGP-----VDRALPSMPVRVLGLRDLPTPGQEVIVVKSEERAEAVAKAXXXXXXXXXXXXXAATEVLGEEEQEQLQEILDKNLVGANVGGKKTKAYLALQRGAVDDLLDSASAKREGG--------QEGPVVVPFLVKADGKGTLDAVTAALAAYEHDTIRTEVIGTGCGPVTEGDVEKAKGVAARECDGGGEACTILAFNVGFVNAEVGEMARREGVRVKKEDVIYTLLEQTKATLQEHMPWERVETSVGKMEVQAVFTLTGKRRARNTVAGCKVVSGGVFSGQQYRYRVMR------GGEVVCKESPPATLYHFKEQVQEVKKGQECGLALEGFGAFEAGDVIECYTVTEKQRSIAE 1078
[Close]
BLAST of NO10G03160 vs. NCBI_GenBank
Match: OJU07687.1 (translation initiation factor IF-2 [Caulobacterales bacterium 68-7])

HSP 1 Score: 365.5 bits (937), Expect = 6.200e-97
Identity = 254/700 (36.29%), Postives = 371/700 (53.00%), Query Frame = 0 
Query:  513 LVLPREPLSVRDLSQRLSMKMNEVMKRLVSLGGKEEYGEVGPETIVDLDVAELLGLEMGRLVKRVDTKADLVGHWGEREGAKKGWPFRAPVVCVMGHVDHGKTTLLDALRRSRVAQAEAGGITQRLGAFHIASAAGGENGKEGDLGVTVLDTPGHAAFGAMRAHGAQATDIVLLVVSAVDGLQEQTKEIVRLLAEQKEEVEXXXXXEGMAGPSLMVAVTKVDKLGGKEEVDAAMGKIVHALAAEGVMCEGLGGDVQVVPVSAPTGEGLEELMERLQLQAEMLELRASREGPGEGVVLDAYMDRGLGAVTNVLMRWGALSPGDVVVAGTQWGRVKRILGEDQNAGSSNSSEGLEQALPSMPVRLLGLKTLPTPGEALMVVKSEERAQAVVEARMAAKERQRYEEMEETEAMGMEDQIQLAEILEKNLVGGHRSGKKTKAFLALQRGLVDDVLESSPMRKDGGXXXXXXXXXXXQVVVPFLVKADGKGTLEALTSALAGYDSDVIKAEVIGMGCGPVTEGDVERAKAAAARACDGGGEACTILAFNVGFVNGEVGEMARREGVSVKRQEVIYTLLDDVKATLQDHMPMERVETSVGRMEVQATFALTGRRKARNTVAGCKVLSGAAFSGSQYRYRVMRKEEGREEGVVVCDESPPATLYHFKEQVQEVKKGSECGLSLDGFGAFEAGDLIECYTVTMKPKQI 1213
            +V+P + ++V++LS R++++  +++K L+  G   +  +V     +D D AEL+  E G  VKRV       G   E +        R PVV VMGHVDHGKT+LLDALR++ VA  E GGITQ +GA+ +      E+G++    VT LDTPGHAAF AMRA GA  TDIV+LVV+A DG+  QT E ++                  A   L+VAV K+DK G      A   ++++ L    ++ E LGGD Q+V VSA TG+GL+EL+ER+ LQAE+L+L+A+ +  GEGVV++A +D+G GAV+ VL+  G L  GD+VVAG QWGRV+ +L E          E L +A PS PV +LGL   P+PG+ L VV+ E RA+ + E R+  K                          EKNL     +              + D++     +K                 +P ++KAD +G+ EA+  +L    +D ++A +I  G G ++E DV+ AK A A           I+ FNV   + +   +A REGV ++   +IY LLDD+K  L   +   + ET +G  +V   F ++   K    VAGC+VL G    G+  + R++R      +G+VV +     TL  FK++V EV  G ECG++  GF     GD IEC+TV    +Q+
Sbjct:  441 VVIP-DVITVQELSNRMAVRGVDIIKFLMRQGVMLKINDV-----IDSDTAELVAAEFGMTVKRVSESDVETGFISEEQDHDDHLETRPPVVTVMGHVDHGKTSLLDALRKADVAGGEHGGITQHIGAYQVRL----EDGQK----VTFLDTPGHAAFSAMRARGANITDIVVLVVAADDGVMPQTIEAIQ--------------HAKAANVPLIVAVNKMDKPG------ADPTRVINELLQHEIVVESLGGDTQLVEVSAKTGQGLDELIERILLQAEVLDLKANPDRTGEGVVIEAKLDKGRGAVSTVLVNRGTLKRGDIVVAGAQWGRVRALLNE--------RGEQLTEAGPSTPVEILGLDGTPSPGDLLAVVEDEARARELTEYRLRVKR-------------------------EKNLAPSAGAS-------------MTDIMAKLSAKKVS--------------ELPLVLKADVQGSAEAIVGSLDKMATDEVRARIILSGAGAISESDVQLAKGAGA----------PIIGFNVR-ASAQARALAEREGVEIRYYAIIYDLLDDIKGVLSGMLAPIQRETFLGNAKVLQAFDISKVGK----VAGCRVLEGVVRKGA--KVRIVR------DGIVVLELGTLQTLKRFKDEVNEVPSGQECGMAFAGFQDIREGDEIECFTVEEIKRQL 1023
[Close]
BLAST of NO10G03160 vs. NCBI_GenBank
Match: OYW83234.1 (translation initiation factor IF-2 [Asticcacaulis sp. 32-58-5])

HSP 1 Score: 354.4 bits (908), Expect = 1.400e-93
Identity = 247/695 (35.54%), Postives = 376/695 (54.10%), Query Frame = 0 
Query:  513 LVLPREPLSVRDLSQRLSMKMNEVMKRLVSLGGKEEYGEVGPETIVDLDVAELLGLEMGRLVKRVDTKADLVGHWGEREGAKKGWPFRAPVVCVMGHVDHGKTTLLDALRRSRVAQAEAGGITQRLGAFHIASAAGGENGKEGDLGVTVLDTPGHAAFGAMRAHGAQATDIVLLVVSAVDGLQEQTKEIVRLLAEQKEEVEXXXXXEGMAGPSLMVAVTKVDKLGGKEEVDAAMGKIVHALAAEGVMCEGLGGDVQVVPVSAPTGEGLEELMERLQLQAEMLELRASREGPGEGVVLDAYMDRGLGAVTNVLMRWGALSPGDVVVAGTQWGRVKRILGEDQNAGSSNSSEGLEQALPSMPVRLLGLKTLPTPGEALMVVKSEERAQAVVEARMAAKERQRYEEMEETEAMGMEDQIQLAEILEKNLVGGHRSGKKTKAFLALQRGLVDDVLESSPMRKDGGXXXXXXXXXXXQVVVPFLVKADGKGTLEALTSALAGYDSDVIKAEVIGMGCGPVTEGDVERAKAAAARACDGGGEACTILAFNVGFVNGEVGEMARREGVSVKRQEVIYTLLDDVKATLQDHMPMERVETSVGRMEVQATFALT--GRRKARNTVAGCKVLSGAAFSGSQYRYRVMRKEEGREEGVVVCDESPPATLYHFKEQVQEVKKGSECGLSLDGFGAFEAGDLIECYTV 1206
            +V+P + +++++LS R++++  +++K L+  G   +  +V     +D D AEL+  E G  VKRV ++AD+   + + +  +     R PVV VMGHVDHGKT+LLDALR++ VA  EAGGITQ +GA+ +       NG++    VT LDTPGHAAF AMRA GA  TDIV+LVV+A DG+  QT E +      K                L+VAV K+DK       DA   +I++ L    V+ E LGGD Q++ VSA TG GL+ L+E L LQAE+L+LRA+ +   EGVV++A +D+G G V  VL++ G L  GD+VVAG+ WGRV+ ++ E         +E L +A PS PV +LGL   P PG+ L VV+++ RA+ + E R    +R R E+M     +     + L +++ K                          L+   +++                 +P ++K+D +G+ EA+  +L    +D ++A +I  G G +TE DV+ AK          G    I+ FNV   + +  ++A REGV ++   +IY L+DD+K  L   +   + ET +G  EV   F ++  GR      VAGC+V  G    G+  R R++R      + +V+ +    +TL  FK++V  V  G ECG++ +GF   +AGD IEC+TV
Sbjct:    6 VVIP-DVITLQELSNRMAVRAVDIIKLLMKQGMMLKINDV-----IDTDTAELVATEFGHTVKRV-SEADVEEGFIDADDHEDDTVIRPPVVAVMGHVDHGKTSLLDALRKADVAAGEAGGITQHIGAYQVRL----PNGEK----VTFLDTPGHAAFSAMRARGANVTDIVVLVVAADDGVMPQTIEAINHARAAK--------------TPLIVAVNKMDK------PDANPQRIINELLQHEVVVESLGGDTQIIEVSAKTGLGLDNLIEALLLQAEVLDLRANPDRTAEGVVIEAKLDKGRGPVATVLVKRGTLKRGDIVVAGSSWGRVRALINE--------RNEQLAEAGPSEPVEILGLDGAPDPGDTLAVVENDARAREITEYR----QRVRREKM-----VAPVGAVSLTDMMSK--------------------------LQDKKLKE-----------------LPLIIKSDVQGSTEAIIGSLDKLATDEVRARIIHSGAGAITESDVQLAK----------GSNSPIIGFNVR-ASKQARDLAEREGVEIRYYAIIYDLIDDIKGVLSGMLAPIQRETFLGNAEVLEVFDISKVGR------VAGCRVTEGRVEKGA--RVRILR------DNIVIQEMGVLSTLKRFKDEVNSVVVGQECGMAFNGFQDLKAGDFIECFTV 580
[Close]
BLAST of NO10G03160 vs. NCBI_GenBank
Match: WP_023460535.1 (translation initiation factor IF-2 [Asticcacaulis sp. YBE204] >ESQ80951.1 translation initiation factor IF-2 [Asticcacaulis sp. YBE204])

HSP 1 Score: 353.6 bits (906), Expect = 2.500e-93
Identity = 246/693 (35.50%), Postives = 367/693 (52.96%), Query Frame = 0 
Query:  514 VLPREPLSVRDLSQRLSMKMNEVMKRLVSLGGKEEYGEVGPETIVDLDVAELLGLEMGRLVKRVDTKADLVGHWGEREGAKKGWPFRAPVVCVMGHVDHGKTTLLDALRRSRVAQAEAGGITQRLGAFHIASAAGGENGKEGDLGVTVLDTPGHAAFGAMRAHGAQATDIVLLVVSAVDGLQEQTKEIVRLLAEQKEEVEXXXXXEGMAGPSLMVAVTKVDKLGGKEEVDAAMGKIVHALAAEGVMCEGLGGDVQVVPVSAPTGEGLEELMERLQLQAEMLELRASREGPGEGVVLDAYMDRGLGAVTNVLMRWGALSPGDVVVAGTQWGRVKRILGEDQNAGSSNSSEGLEQALPSMPVRLLGLKTLPTPGEALMVVKSEERAQAVVEARMAAKERQRYEEMEETEAMGMEDQI-QLAEILEKNLVGGHRSGKKTKAFLALQRGLVDDVLESSPMRKDGGXXXXXXXXXXXQVVVPFLVKADGKGTLEALTSALAGYDSDVIKAEVIGMGCGPVTEGDVERAKAAAARACDGGGEACTILAFNVGFVNGEVGEMARREGVSVKRQEVIYTLLDDVKATLQDHMPMERVETSVGRMEVQATFALTGRRKARNTVAGCKVLSGAAFSGSQYRYRVMRKEEGREEGVVVCDESPPATLYHFKEQVQEVKKGSECGLSLDGFGAFEAGDLIECYTV 1206
            V+  + ++V++LS R++++  +++K L+  G   +  +V     +D D AEL+  E G  VKRV +++D++  + + E        R PVV VMGHVDHGKT+LLDALR++ VA  EAGGITQ +GA+ +   +G          VT LDTPGHAAF AMRA GA  TDIV+LVV+A DG+  QT E +      K  +              +VAV K+DK       +A   ++++ L    V+ E LGG+ Q++ VSA TG GL+ L+E + LQAE+L+LRA+ +   EGVV++A +D+G G V  VL++ G L  GD++VAG  WGRV+ ++ E         +E L +A PS PV +LGL   P PGEA  VV+S+ RA+ + E R   K   R + +    A+ + D + +LAE             KK K                                      +  ++KAD +G+ EA+  +L    +D ++A +I  G G +TE DV+ AK          G    I+ FNV   + +  ++A REGV ++   +IY L+DD+K  L   +   + ET +G  EV   F +T   K    VAGC+V  G    G+  R R++R      + VV+ +    +TL  FK++V  V  G ECG++ +GF   +AGD IEC+TV
Sbjct:  473 VIIPDVITVQELSNRMAVRAVDIIKMLMKQGMMLKINDV-----IDTDTAELVATEFGHTVKRV-SESDVMEGFIDAEDHDDDTVVRPPVVAVMGHVDHGKTSLLDALRKADVATGEAGGITQHIGAYQVRVPSGDR--------VTFLDTPGHAAFSAMRARGANVTDIVVLVVAADDGVMPQTIEAINHARSAKTPI--------------IVAVNKMDK------HEANPQRVINELLQHEVVVEALGGETQIIEVSAKTGLGLDSLIEAILLQAEVLDLRANPDRTAEGVVIEAKLDKGRGPVATVLVKRGTLKRGDIIVAGASWGRVRALINE--------RNEQLPEAGPSEPVEILGLDAAPDPGEAFAVVESDARAREITEYRQRIK---REKTLAPVGAISLTDMMSKLAE-------------KKVKE-------------------------------------LQLIIKADVQGSAEAIIGSLEKVGNDEVRARIIHSGAGAITESDVQLAK----------GSNSPIIGFNVR-ASKQARDLAEREGVEIRYYAIIYDLIDDIKGVLSGMLAPIQRETFLGNAEVLEVFDITKVGK----VAGCRVTEGRVEKGA--RVRILR------DNVVIQEMGVLSTLKRFKDEVNSVVVGQECGMAFNGFQDLKAGDFIECFTV 1047
[Close]
BLAST of NO10G03160 vs. NCBI_GenBank
Match: WP_018113330.1 (translation initiation factor IF-2 [Caulobacter sp. UNC279MFTsu5.1] >SFK08923.1 translation initiation factor IF-2 [Caulobacter sp. UNC279MFTsu5.1])

HSP 1 Score: 352.8 bits (904), Expect = 4.200e-93
Identity = 247/700 (35.29%), Postives = 372/700 (53.14%), Query Frame = 0 
Query:  513 LVLPREPLSVRDLSQRLSMKMNEVMKRLVSLGGKEEYGEVGPETIVDLDVAELLGLEMGRLVKRVDTKADLVGHWGEREGAKKGWPFRAPVVCVMGHVDHGKTTLLDALRRSRVAQAEAGGITQRLGAFHIASAAGGENGKEGDLGVTVLDTPGHAAFGAMRAHGAQATDIVLLVVSAVDGLQEQTKEIVRLLAEQKEEVEXXXXXEGMAGPSLMVAVTKVDKLGGKEEVDAAMGKIVHALAAEGVMCEGLGGDVQVVPVSAPTGEGLEELMERLQLQAEMLELRASREGPGEGVVLDAYMDRGLGAVTNVLMRWGALSPGDVVVAGTQWGRVKRILGEDQNAGSSNSSEGLEQALPSMPVRLLGLKTLPTPGEALMVVKSEERAQAVVEARMAAKERQRYEEMEETEAMGMEDQIQLAEILEKNLVGGHRSGKKTKAFLALQRGLVDDVLESSPMRKDGGXXXXXXXXXXXQVVVPFLVKADGKGTLEALTSALAGYDSDVIKAEVIGMGCGPVTEGDVERAKAAAARACDGGGEACTILAFNVGFVNGEVGEMARREGVSVKRQEVIYTLLDDVKATLQDHMPMERVETSVGRMEVQATFALTGRRKARNTVAGCKVLSGAAFSGSQYRYRVMRKEEGREEGVVVCDESPPATLYHFKEQVQEVKKGSECGLSLDGFGAFEAGDLIECYTVTMKPKQI 1213
            +V+P + ++V++LS R++++  +++K L+  G   +  +V     +D D AEL+  E G  VKRV ++AD+   +   E        R PVV VMGHVDHGKT+LLDALR++ VA  E GGITQ +GA+ +      ENG++    VT LDTPGHAAF  MRA GA  TDIV+LVV+  DG+  QT E ++                  A   ++VAV K+DK G          ++ + L    ++ E LGGD Q+V VSA TG+GL+EL+ER+ LQAE+L+L+A+ +   +GVV++A +D+G GAV+ VL+  G L  GD+VVAG+Q+GRV+ +L E         +E L +A P+ PV +LGL  +P+PG++  VV++E RA+ + E R+  K                          EK++   H  G    +   +   L D  L                        +P ++KAD +G+ EA+  +L    +D ++A +I  G G ++E DV  AK A A           ++ FNV   + +   +A REGV ++   +IY LLDD+K  L   +   + ET +G  EV   F ++   K    VAGCKV  G    G+  + R++R +      +VV +     TL  FK++V EV  G ECG+   GF   + GD+IEC+TV    +Q+
Sbjct:  447 VVIP-DVITVQELSNRMAVRGVDIIKFLMRQGVMLKINDV-----IDNDTAELVATEFGHTVKRV-SEADVEEGFIGAEDIDDHLEPRPPVVTVMGHVDHGKTSLLDALRKADVAGGEHGGITQHIGAYQVRL----ENGQK----VTFLDTPGHAAFSQMRARGANITDIVILVVAGDDGVMPQTVEAIK--------------HAKAAEVPIIVAVNKMDKPGSDST------RVTNELLQHEIVVESLGGDTQIVEVSAKTGQGLDELIERILLQAEVLDLKANPDRTADGVVIEAKLDKGRGAVSTVLVNRGTLKRGDIVVAGSQFGRVRALLNE--------RNEQLTEAGPATPVEILGLDGVPSPGDSFAVVENEARARELTEYRIRLKR-------------------------EKSM---HPVGAGATSMADMMAKLQDKKLRE----------------------LPLVIKADVQGSAEAIIGSLEQMATDEVRARIILSGAGAISESDVMLAKGAGA----------PLIGFNVR-ASAQARALAEREGVEIRYYAIIYDLLDDIKGVLSGMLAPIQRETFLGNAEVLQAFDISKVGK----VAGCKVTEGVVRKGA--KVRIIRND------IVVLELGTLQTLKRFKDEVNEVPSGQECGMMFAGFQDIKVGDVIECFTVEEIKRQL 1030
[Close]
BLAST of NO10G03160 vs. NCBI_GenBank
Match: EGF96120.1 (translation initiation factor IF-2 [Brevundimonas diminuta ATCC 11568])

HSP 1 Score: 352.4 bits (903), Expect = 5.500e-93
Identity = 252/695 (36.26%), Postives = 364/695 (52.37%), Query Frame = 0 
Query:  513 LVLPREPLSVRDLSQRLSMKMNEVMKRLVSLGGKEEYGEVGPETIVDLDVAELLGLEMGRLVKRVDTKADLVGHWGEREGAKKGWPFRAPVVCVMGHVDHGKTTLLDALRRSRVAQAEAGGITQRLGAFHIASAAGGENGKEGDLGVTVLDTPGHAAFGAMRAHGAQATDIVLLVVSAVDGLQEQTKEIVRLLAEQKEEVEXXXXXEGMAGPSLMVAVTKVDKLGGKEEVDAAMGKIVHALAAEGVMCEGLGGDVQVVPVSAPTGEGLEELMERLQLQAEMLELRASREGPGEGVVLDAYMDRGLGAVTNVLMRWGALSPGDVVVAGTQWGRVKRILGEDQNAGSSNSSEGLEQALPSMPVRLLGLKTLPTPGEALMVVKSEERAQAVVEARMAAKERQRYEEMEETEAMGMEDQIQLAEILEKNLVGGHRSGKKTKAFLALQRGLVDDVLESSPMRKDGGXXXXXXXXXXXQVVVPFLVKADGKGTLEALTSALAGYDSDVIKAEVIGMGCGPVTEGDVERAKAAAARACDGGGEACTILAFNVGFVNGEVGEMARREGVSVKRQEVIYTLLDDVKATLQDHMPMERVETSVGRMEVQATFALT--GRRKARNTVAGCKVLSGAAFSGSQYRYRVMRKEEGREEGVVVCDESPPATLYHFKEQVQEVKKGSECGLSLDGFGAFEAGDLIECYTV 1206
            +V+P + ++V +L+ R++++  +++K L+  G   +  +V     +D D AEL+  E G  VKRV       G   + + A  G   RAPVV +MGHVDHGKT+LLDALR + VA  EAGGITQ +GA+ +  A G          +T LDTPGHAAF AMRA GA  TDIV+LVV+A DG+  QT E ++                  AG  ++VAV K+DK       DA   KIV+ L    V+ E LGGD Q++ +SA     L  L + + LQAE+++LRA+ +   EGVV++A +D+G G V  VL++ G L  GD+VVAG+ WG+V+ +L E         +E L +A PS+PV +LGL   P+PG+   VV+SE RA+ + E R   K        E+T+  G    + L +++ K                          L+S  + +                 +P L+KAD +GT EA+  +L    +D ++A  +  G G +TE DV  AK+A A           IL FNV   + +  ++A REGV ++   +IY LLDD+K  L   +   + ET +G  +V  TF +T  GR      VAGC+V  G    G+  R R++R      + VVV +     TL  FK++V EV  G ECG+   GF   + GD IEC+TV
Sbjct:    1 MVIP-DTITVGELANRMAVRGVDIIKFLMRQGLMMKINDV-----IDSDTAELVAEEYGMAVKRVSESDVEEGFIADADDADAG-EIRAPVVAIMGHVDHGKTSLLDALRTTDVAGGEAGGITQHIGAYQVRLADGQR--------ITFLDTPGHAAFSAMRARGANVTDIVVLVVAADDGVMPQTVEAIQ--------------HAKAAGSPIIVAVNKIDK------PDANSQKIVNELLQYEVISESLGGDTQIIELSAKEKINLNGLTDAILLQAEVMDLRANADRSAEGVVIEAKLDKGRGPVATVLVKRGTLKRGDIVVAGSAWGKVRALLNE--------RNEQLPEAGPSVPVEILGLDEAPSPGDVFAVVESEARARELTEYRQRVKR-------EKTQVSG--GSLSLVDMMSK--------------------------LQSKKVNE-----------------LPVLIKADVQGTAEAIVGSLDKMGNDEVRARTVYSGAGGITESDVNLAKSAGA----------PILGFNVR-ASKQARDLAEREGVEIRYYSIIYDLLDDIKGVLSGMLAPLQRETFLGNAKVLQTFDITKVGR------VAGCRVTEGVVRKGA--RVRIIR------DDVVVLELGVLNTLKRFKDEVNEVPSGQECGMQFAGFQDIKEGDYIECFTV 575
[Close]
BLAST of NO10G03160 vs. NCBI_GenBank
Match: EKY26326.1 (translation initiation factor IF-2 [Brevundimonas diminuta 470-4])

HSP 1 Score: 352.4 bits (903), Expect = 5.500e-93
Identity = 255/695 (36.69%), Postives = 367/695 (52.81%), Query Frame = 0 
Query:  513 LVLPREPLSVRDLSQRLSMKMNEVMKRLVSLGGKEEYGEVGPETIVDLDVAELLGLEMGRLVKRVDTKADLVGHWGEREGAKKGWPFRAPVVCVMGHVDHGKTTLLDALRRSRVAQAEAGGITQRLGAFHIASAAGGENGKEGDLGVTVLDTPGHAAFGAMRAHGAQATDIVLLVVSAVDGLQEQTKEIVRLLAEQKEEVEXXXXXEGMAGPSLMVAVTKVDKLGGKEEVDAAMGKIVHALAAEGVMCEGLGGDVQVVPVSAPTGEGLEELMERLQLQAEMLELRASREGPGEGVVLDAYMDRGLGAVTNVLMRWGALSPGDVVVAGTQWGRVKRILGEDQNAGSSNSSEGLEQALPSMPVRLLGLKTLPTPGEALMVVKSEERAQAVVEARMAAKERQRYEEMEETEAMGMEDQIQLAEILEKNLVGGHRSGKKTKAFLALQRGLVDDVLESSPMRKDGGXXXXXXXXXXXQVVVPFLVKADGKGTLEALTSALAGYDSDVIKAEVIGMGCGPVTEGDVERAKAAAARACDGGGEACTILAFNVGFVNGEVGEMARREGVSVKRQEVIYTLLDDVKATLQDHMPMERVETSVGRMEVQATFALT--GRRKARNTVAGCKVLSGAAFSGSQYRYRVMRKEEGREEGVVVCDESPPATLYHFKEQVQEVKKGSECGLSLDGFGAFEAGDLIECYTV 1206
            +V+P + ++V +L+ R++++  +++K L+  G   +  +V     +D D AEL+  E G  VKRV       G   E + A  G   RAPVV +MGHVDHGKT+LLDALR + VA  EAGGITQ +GA+ +  A G          +T LDTPGHAAF AMRA GA  TDIV+LVV+A DG+  QT E ++                  AG  ++VAV KVDK       DA   KIV+ L    V+ E LGGD Q++ +SA     L  L + + LQAE+++LRA+ E   EGVV++A +D+G G V  VL++ G L  GD+VVAG+ WG+ + +L +++NA        L +A PS+PV +LGL   PTPG+   VV++E RA+ + E R   K        E+ +  G    + LA+++ K  +G  +  +                                         +P L+K+D +GT EA+T++L    +D ++A V+  G G +TE DV  AK+A A           IL FNV   + +  E+A REGV ++   +IY LLDD+K  L   +   + ET +G  +V  TF +T  GR      VAGC+V  G    G+  R R++R      + VVV +     TL  FK++V EV  G ECG+   GF   + GD IEC+TV
Sbjct:   43 VVIP-DTITVGELANRMAVRGVDIIKFLMRQGLMMKINDV-----IDSDTAELVAEEYGMAVKRVSESDIEEGFIAEADEADTG-DLRAPVVAIMGHVDHGKTSLLDALRTTDVAAGEAGGITQHIGAYQVRLADGQR--------ITFLDTPGHAAFSAMRARGANVTDIVVLVVAADDGVMPQTVEAIQ--------------HAKAAGSPIIVAVNKVDK------PDANPQKIVNELLQYEVIAESLGGDTQIIELSAKEKINLNGLTDAILLQAEVMDLRANAERSAEGVVIEAQLDKGRGPVATVLVKRGTLKRGDIVVAGSAWGKARALL-DERNA-------QLTEAGPSVPVEILGLSEAPTPGDVFAVVENEARARELTEYRQRVKR-------EKGQVSG--GSLSLADMMAK--LGSKKISE-----------------------------------------LPVLIKSDVQGTAEAITTSLEKMGNDEVRARVVMHGAGGITESDVNLAKSAGA----------PILGFNVR-ASKQARELAEREGVEIRYYSIIYDLLDDIKGVLSGMLAPLQRETFLGNAKVLQTFDITKVGR------VAGCRVTEGVVRKGA--RVRIIR------DDVVVLELGVLNTLKRFKDEVNEVPSGQECGMQFAGFQDIKEGDYIECFTV 617
[Close]
BLAST of NO10G03160 vs. NCBI_GenBank
Match: WP_035090256.1 (translation initiation factor IF-2 [Caulobacter henricii])

HSP 1 Score: 352.4 bits (903), Expect = 5.500e-93
Identity = 247/700 (35.29%), Postives = 374/700 (53.43%), Query Frame = 0 
Query:  513 LVLPREPLSVRDLSQRLSMKMNEVMKRLVSLGGKEEYGEVGPETIVDLDVAELLGLEMGRLVKRVDTKADLVGHWGEREGAKKGWPFRAPVVCVMGHVDHGKTTLLDALRRSRVAQAEAGGITQRLGAFHIASAAGGENGKEGDLGVTVLDTPGHAAFGAMRAHGAQATDIVLLVVSAVDGLQEQTKEIVRLLAEQKEEVEXXXXXEGMAGPSLMVAVTKVDKLGGKEEVDAAMGKIVHALAAEGVMCEGLGGDVQVVPVSAPTGEGLEELMERLQLQAEMLELRASREGPGEGVVLDAYMDRGLGAVTNVLMRWGALSPGDVVVAGTQWGRVKRILGEDQNAGSSNSSEGLEQALPSMPVRLLGLKTLPTPGEALMVVKSEERAQAVVEARMAAKERQRYEEMEETEAMGMEDQIQLAEILEKNLVGGHRSGKKTKAFLALQRGLVDDVLESSPMRKDGGXXXXXXXXXXXQVVVPFLVKADGKGTLEALTSALAGYDSDVIKAEVIGMGCGPVTEGDVERAKAAAARACDGGGEACTILAFNVGFVNGEVGEMARREGVSVKRQEVIYTLLDDVKATLQDHMPMERVETSVGRMEVQATFALTGRRKARNTVAGCKVLSGAAFSGSQYRYRVMRKEEGREEGVVVCDESPPATLYHFKEQVQEVKKGSECGLSLDGFGAFEAGDLIECYTVTMKPKQI 1213
            +V+P + ++V++LS R++++  +++K L+  G   +  +V     +D D AEL+  E G  VKRV ++AD+   +   E        R PVV VMGHVDHGKT+LLDALR++ VA  E GGITQ +GA+ +      ENG++    VT LDTPGHAAF  MRA GA  TD+V+LVV+  DG+  QT E ++                  A   ++VAV K+DK G      A   ++V+ L    ++ E LGGD Q+V VSA TG+GL+EL+ER+ LQAE+L+L+A+ +   +GVV++A +D+G GAV+ VL+  G L  GD+VVAG+Q+GRV+ +L E         +E L +A P+ PV +LGL  +P+PG++  VV++E RA+ + E R+  K                          EK++   H  G    +   +   L D  L                        +P ++KAD +G+ EA+  +L    +D ++A +I  G G ++E DV  AK A A           ++ FNV   + +   +A REGV ++   +IY LLDD+K  L   +   + ET +G  EV   F ++   K    VAGC+V  G    G+  + R++R +      +VV +     TL  FK++V EV  G ECG+   GF   + GD+IEC+TV    +Q+
Sbjct:  483 VVIP-DVITVQELSNRMAVRGVDIIKFLMRQGVMLKINDV-----IDNDTAELVATEFGHTVKRV-SEADVEEGFIGAEDIDDHLEPRPPVVTVMGHVDHGKTSLLDALRKADVAGGEHGGITQHIGAYQVRL----ENGQK----VTFLDTPGHAAFSQMRARGANITDLVILVVAGDDGVMPQTVEAIK--------------HARAANVPIIVAVNKMDKPG------ADPTRVVNELLQHEIVVESLGGDTQIVEVSAKTGQGLDELIERILLQAEVLDLKANPDRTADGVVIEAKLDKGRGAVSTVLVNRGTLKRGDIVVAGSQFGRVRALLNE--------RNEQLTEAGPATPVEILGLDGVPSPGDSFAVVENEARARELTEYRIRLKR-------------------------EKSM---HPVGAGATSMADMMAKLQDKKLRE----------------------LPLVIKADVQGSAEAIIGSLEQMATDEVRARIILSGAGAISESDVMLAKGAGA----------PLIGFNVR-ASAQARALAEREGVEIRYYAIIYDLLDDIKGVLSGMLAPIQRETFLGNAEVLQAFDISKVGK----VAGCRVTEGVVRKGA--KVRIIRND------IVVLELGTLQTLKRFKDEVNEVPSGQECGMMFAGFQDIKVGDVIECFTVEEIKRQL 1066
[Close]
BLAST of NO10G03160 vs. NCBI_GenBank
Match: WP_051040152.1 (translation initiation factor IF-2, partial [Brevundimonas diminuta])

HSP 1 Score: 352.4 bits (903), Expect = 5.500e-93
Identity = 255/695 (36.69%), Postives = 367/695 (52.81%), Query Frame = 0 
Query:  513 LVLPREPLSVRDLSQRLSMKMNEVMKRLVSLGGKEEYGEVGPETIVDLDVAELLGLEMGRLVKRVDTKADLVGHWGEREGAKKGWPFRAPVVCVMGHVDHGKTTLLDALRRSRVAQAEAGGITQRLGAFHIASAAGGENGKEGDLGVTVLDTPGHAAFGAMRAHGAQATDIVLLVVSAVDGLQEQTKEIVRLLAEQKEEVEXXXXXEGMAGPSLMVAVTKVDKLGGKEEVDAAMGKIVHALAAEGVMCEGLGGDVQVVPVSAPTGEGLEELMERLQLQAEMLELRASREGPGEGVVLDAYMDRGLGAVTNVLMRWGALSPGDVVVAGTQWGRVKRILGEDQNAGSSNSSEGLEQALPSMPVRLLGLKTLPTPGEALMVVKSEERAQAVVEARMAAKERQRYEEMEETEAMGMEDQIQLAEILEKNLVGGHRSGKKTKAFLALQRGLVDDVLESSPMRKDGGXXXXXXXXXXXQVVVPFLVKADGKGTLEALTSALAGYDSDVIKAEVIGMGCGPVTEGDVERAKAAAARACDGGGEACTILAFNVGFVNGEVGEMARREGVSVKRQEVIYTLLDDVKATLQDHMPMERVETSVGRMEVQATFALT--GRRKARNTVAGCKVLSGAAFSGSQYRYRVMRKEEGREEGVVVCDESPPATLYHFKEQVQEVKKGSECGLSLDGFGAFEAGDLIECYTV 1206
            +V+P + ++V +L+ R++++  +++K L+  G   +  +V     +D D AEL+  E G  VKRV       G   E + A  G   RAPVV +MGHVDHGKT+LLDALR + VA  EAGGITQ +GA+ +  A G          +T LDTPGHAAF AMRA GA  TDIV+LVV+A DG+  QT E ++                  AG  ++VAV KVDK       DA   KIV+ L    V+ E LGGD Q++ +SA     L  L + + LQAE+++LRA+ E   EGVV++A +D+G G V  VL++ G L  GD+VVAG+ WG+ + +L +++NA        L +A PS+PV +LGL   PTPG+   VV++E RA+ + E R   K        E+ +  G    + LA+++ K  +G  +  +                                         +P L+K+D +GT EA+T++L    +D ++A V+  G G +TE DV  AK+A A           IL FNV   + +  E+A REGV ++   +IY LLDD+K  L   +   + ET +G  +V  TF +T  GR      VAGC+V  G    G+  R R++R      + VVV +     TL  FK++V EV  G ECG+   GF   + GD IEC+TV
Sbjct:  112 VVIP-DTITVGELANRMAVRGVDIIKFLMRQGLMMKINDV-----IDSDTAELVAEEYGMAVKRVSESDIEEGFIAEADEADTG-DLRAPVVAIMGHVDHGKTSLLDALRTTDVAAGEAGGITQHIGAYQVRLADGQR--------ITFLDTPGHAAFSAMRARGANVTDIVVLVVAADDGVMPQTVEAIQ--------------HAKAAGSPIIVAVNKVDK------PDANPQKIVNELLQYEVIAESLGGDTQIIELSAKEKINLNGLTDAILLQAEVMDLRANAERSAEGVVIEAQLDKGRGPVATVLVKRGTLKRGDIVVAGSAWGKARALL-DERNA-------QLTEAGPSVPVEILGLSEAPTPGDVFAVVENEARARELTEYRQRVKR-------EKGQVSG--GSLSLADMMAK--LGSKKISE-----------------------------------------LPVLIKSDVQGTAEAITTSLEKMGNDEVRARVVMHGAGGITESDVNLAKSAGA----------PILGFNVR-ASKQARELAEREGVEIRYYSIIYDLLDDIKGVLSGMLAPLQRETFLGNAKVLQTFDITKVGR------VAGCRVTEGVVRKGA--RVRIIR------DDVVVLELGVLNTLKRFKDEVNEVPSGQECGMQFAGFQDIKEGDYIECFTV 686
The following BLAST results are available for this feature:
BLAST of NO10G03160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25537.15.900e-25761.86translation initiation factor if-2 [Nannochloropsi... [more]
XP_005854583.18.600e-25661.92translation initiation factor if-2 [Nannochloropsi... [more]
OJU07687.16.200e-9736.29translation initiation factor IF-2 [Caulobacterale... [more]
OYW83234.11.400e-9335.54translation initiation factor IF-2 [Asticcacaulis ... [more]
WP_023460535.12.500e-9335.50translation initiation factor IF-2 [Asticcacaulis ... [more]
WP_018113330.14.200e-9335.29translation initiation factor IF-2 [Caulobacter sp... [more]
EGF96120.15.500e-9336.26translation initiation factor IF-2 [Brevundimonas ... [more]
EKY26326.15.500e-9336.69translation initiation factor IF-2 [Brevundimonas ... [more]
WP_035090256.15.500e-9335.29translation initiation factor IF-2 [Caulobacter he... [more]
WP_051040152.15.500e-9336.69translation initiation factor IF-2, partial [Brevu... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001192NSK001192Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G03160.1NO10G03160.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|665338gene_3882Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100232g3gene4970Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G03160.1NO10G03160.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G03160 ID=NO10G03160|Name=NO10G03160|organism=Nannochloropsis oceanica|type=gene|length=4066bp
ACAGGCATTATTGCCACGCATGCACCTTTAAGCGCCGCTAGCACCCGCAC
ACCGCGGTAAAAGCCTACCATTCATTGCACAGAAGCATAGGGCCGCGCTA
TATCTACGCTAGGGATCTGTCAGCAAGACCGGTTGCTTCACTTGGCGTCG
GGCTAGCTAGTTATTGCAGTAATCAGCAGCGGCGGCTGCAGCAACGGCGC
ACTCATACAACTACCTCGGTCATGTCCCGGCAATTCACCACGATGGGGCT
GAACATGCTCTCGCGACGGTCATCGTTGCTGCTGTGTGTGCCGTCGAAGA
CGATTGTGCGGCGCCTCCTCTCGAATGTGGCCCAGCAGCCAGTGgtacga
gagagtagcatcgaaggagggagggaggggaagggagcgagggggggaga
gagggagggggagggaggaatggagtatgttcacatgaaatctgcctctc
caatgttgtgcatgatgcccccagcacatgctcccacacgacttctctca
tctctgcatcttcccctttctctctatcacagGGCAAAAGCCCCACCCAA
GGCCCCCGGCTCAAGGTGAGCCACAACAACCACCGCAAAGGATCTGGAGG
AGGAGGTAAGAGCAAGGAAGAAGCAGCGCTCGCGGCGGTCAATATGGGAA
AGGGAGGGATGGCACCCTCTCTGTCGGCCAAAAAGTCCCCGCCACCACAA
GCCGTAGACCCTCTAGCCAGCATGAAGAAGACCAATGGTGCGGAGGTCGC
CACGGAAGCTGTCGGCGGGAAGAAGAAGAAGCAGCCGCAGCAGGAGCAGC
AGCAGCCAAAGTGGAACAACAAAAAGCAACAGCAGCAGCAACAACAACAA
CAAACGCAGCTAGGTGCTAAGCCGAACGCGGTGAATTCCAAAATCCAGCA
GCAACAGCAAGCATCAGGAGGAGGGAAGCAAGGCAATGCTGCGGCCAAAT
TTAGACAGCAACAAAGCATAGCTGCACAACGAGGACAGTCCGTTCTTGGG
GTGGGAGGGGTGGGAGCCTTAAGCTCCTCCTCCTCCCCCTCCTCCCCCTC
CTCCTCCTCCTCCTCCTCTTCCTCCTCTCGTTTCGCCAACACCGTCACCA
TGCCCGATGGAACCCGCATGCGCGGAAGAGTATTTGTTGCTGGCGCTGCT
ACTGCTGCTTCGGGGAACGAGAGCAACAGTATTGGCGGCAGCAGCAGCAG
TATGATGGATGCTGCGATCTTCGAGCGCTTTAGCAATATTGGAGAGCGGC
TAGCTAATAGCCGCAATGGCCAGCAGCAGCAACAGCAGCAACAGAGAAGG
GGTGGTCGCCAGCAGCAGCAGCAGAAAGCACAGCAAGAGCAACAGCAGCG
AGGGGGGCTCACAAGAAACAACGGCCGGCAAGACCTGCGGCAAAAACCAT
CACCCTCTTCCACCTTCCCTCCTTTCCCACCTCCACATCATCAACACCCC
CAACCCAACAGCAGAGTCTTCACCGGTTTCAACTTTGGCGCCAACAGCAG
CAGCAGCAACAACAATAAAAACAACAACAACAACAACAACAACAACAACA
GCAGCAGCAACAGCAACAGCAGCAGCAGCAGCAGCAGCGACCTTTTTGGA
GGAGGAAGAGTAGGAGAGGGACGAGGAGGACGATGGAGCCTACCACAAGT
TGCAGATGCTGGTACTCCAACTGCTCCTCTGTCTCCCCCTTCTCAAGTCT
CAGCACCAATGGCCGAGCCCGGGCAGGTTCGAATGTGGGAGATTGAACTT
AGTAACAGGGTTACGCCCGCTCCTCGCATCCCCTTCCCCTCCCGCGAAGA
GCACCACCAGCAACACCAACAGCAGAGCCGACTCCTCCTACAGCAGCAAC
AGCACCGTCGGCGCGGGGGTGGTGCTGGCGGTGGGCAACAGCAGAGGAGG
AGCCCTCGGTTAGACAGACGCTTGAAGGCTTTGCAGACGATGCCACTGGT
GCTGCCACGCGAGCCTTTATCTGTGCGGGATTTAAGCCAGAGGCTCTCCA
TGAAAATGAATGAAGTTATGAAACGGTTGGTCAGTTTGGGAGGGAAGGAG
GAGTACGGCGAGGTAGGTCCAGAAACGATAGTGGATCTGGACGTGGCTGA
GCTGCTGGGGTTAGAGATGGGGCGCCTCGTGAAGAGGGTAGACACGAAGG
CAGACCTGGTGGGGCACTGGGGGGAGAGGGAGGGAGCGAAGAAGGGATGG
CCGTTCAGGGCTCCGGTGGTGTGCGTCATGGGCCACGTGGACCATGGGAA
GACGACATTGCTTGATGCCTTGAGGAGGAGTCGAGTGGCTCAAGCGGAAG
CGGGGGGCATCACTCAACGGCTGGGTGCGTTTCATATTGCCTCCGCGGCG
GGAGGGGAGAACGGGAAGGAGGGAGATTTGGGCGTGACAGTGCTGGACAC
TCCAGGGCACGCGGCGTTTGGCGCAATGAGAGCCCACGGGGCTCAGGCGA
CAGACATCGTGCTGTTGGTCGTGAGTGCGGTGGACGGGCTGCAAGAGCAG
ACGAAGGAGATTGTGAGGCTGCTAGCCGAGCAGAAAGAGGAGGTGGAGGA
GGAGGGAGAGGGGGAGGGCATGGCAGGGCCGTCGCTGATGGTCGCCGTGA
CGAAGGTGGATAAATTAGGGGGCAAGGAGGAAGTGGATGCGGCTATGGGG
AAGATCGTGCACGCCTTGGCTGCAGAAGGAGTGATGTGCGAGGGGTTGGG
AGGGGACGTCCAGGTGGTGCCTGTGTCGGCCCCGACAGGAGAAGGGTTGG
AGGAATTAATGGAGCGATTACAGCTGCAGGCAGAGATGCTGGAGTTGAGG
GCGTCGAGGGAGGGACCGGGGGAGGGGGTGGTGCTTGACGCGTACATGGA
CCGGGGATTAGGGGCTGTGACGAATGTGTTGATGAGGTGGGGGGCATTGA
GTCCGGGAGATGTGGTGGTGGCAGGGACCCAGTGGGGGAGGGTGAAGCGG
ATCTTGGGGGAGGATCAGAATGCGGGGAGCAGCAACAGCAGCGAGGGGTT
GGAGCAGGCCCTGCCATCGATGCCTGTACGGCTGTTGGGCTTAAAGACCT
TACCTACCCCCGGAGAAGCCTTAATGGTCGTCAAGAGCGAGGAAAGAGCC
CAGGCCGTGGTAGAAGCCAGGATGGCTGCCAAGGAGCGTCAGAGGTACGA
GGAGATGGAGGAGACAGAGGCGATGGGAATGGAAGACCAAATCCAGCTGG
CCGAGATTTTGGAGAAGAATCTGGTGGGGGGGCATCGTTCGGGGAAAAAA
ACCAAGGCCTTTCTAGCGTTGCAACGTGGGTTGGTGGACGACGTGCTGGA
GAGTAGTCCGATGAGGAAGGACGGAGGGGGGGAGGAAGGACGGAGGGAAG
GGGGGCGGCAGCAGGTGGTGGTACCGTTTTTGGTGAAGGCGGATGGGAAG
GGGACGTTGGAGGCATTGACGTCTGCATTGGCGGGATACGACAGTGATGT
TATCAAAGCGGAGGTGATCGGGATGGGGTGCGGCCCGGTGACGGAGGGAG
ATGTGGAGAGAGCCAAGGCGGCTGCGGCCAGGGCATGTGATGGTGGGGGA
GAGGCGTGTACGATATTGGCGTTCAACGTAGGGTTTGTGAATGGGGAGGT
TGGGGAGATGGCGAGAAGGGAGGGGGTGAGTGTGAAGAGGCAGGAGGTGA
TATACACGTTGTTGGATGACGTCAAGGCGACGTTACAGGACCACATGCCG
ATGGAGAGGGTGGAGACCAGTGTGGGAAGGATGGAGGTGCAAGCTACCTT
TGCCTTGACGGGTCGGAGGAAGGCGAGAAATACGGTGGCGGGATGTAAGG
TGCTAAGTGGAGCGGCATTCTCCGGAAGTCAGTACCGGTACCGTGTGATG
AGGAAGGAGGAAGGGAGGGAGGAAGGGGTGGTTGTGTGTGATGAAAGTCC
CCCGGCGACGCTGTACCACTTCAAGGAGCAGGTGCAGGAGGTGAAGAAAG
GATCGGAGTGTGGGTTGAGCTTAGATGGGTTCGGAGCGTTTGAGGCGGGA
GATCTGATTGAGTGTTACACAGTCACGATGAAGCCAAAGCAGATAGGGGA
GATTTTCAGGTACTGA
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protein sequence of NO10G03160.1

>NO10G03160.1-protein ID=NO10G03160.1-protein|Name=NO10G03160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1219bp
MSRQFTTMGLNMLSRRSSLLLCVPSKTIVRRLLSNVAQQPVGKSPTQGPR
LKVSHNNHRKGSGGGGKSKEEAALAAVNMGKGGMAPSLSAKKSPPPQAVD
PLASMKKTNGAEVATEAVGGKKKKQPQQEQQQPKWNNKKQQQQQQQQQTQ
LGAKPNAVNSKIQQQQQASGGGKQGNAAAKFRQQQSIAAQRGQSVLGVGG
VGALSSSSSPSSPSSSSSSSSSSRFANTVTMPDGTRMRGRVFVAGAATAA
SGNESNSIGGSSSSMMDAAIFERFSNIGERLANSRNGQQQQQQQQRRGGR
QQQQQKAQQEQQQRGGLTRNNGRQDLRQKPSPSSTFPPFPPPHHQHPQPN
SRVFTGFNFGANSSSSNNNKNNNNNNNNNNSSSNSNSSSSSSSDLFGGGR
VGEGRGGRWSLPQVADAGTPTAPLSPPSQVSAPMAEPGQVRMWEIELSNR
VTPAPRIPFPSREEHHQQHQQQSRLLLQQQQHRRRGGGAGGGQQQRRSPR
LDRRLKALQTMPLVLPREPLSVRDLSQRLSMKMNEVMKRLVSLGGKEEYG
EVGPETIVDLDVAELLGLEMGRLVKRVDTKADLVGHWGEREGAKKGWPFR
APVVCVMGHVDHGKTTLLDALRRSRVAQAEAGGITQRLGAFHIASAAGGE
NGKEGDLGVTVLDTPGHAAFGAMRAHGAQATDIVLLVVSAVDGLQEQTKE
IVRLLAEQKEEVEEEGEGEGMAGPSLMVAVTKVDKLGGKEEVDAAMGKIV
HALAAEGVMCEGLGGDVQVVPVSAPTGEGLEELMERLQLQAEMLELRASR
EGPGEGVVLDAYMDRGLGAVTNVLMRWGALSPGDVVVAGTQWGRVKRILG
EDQNAGSSNSSEGLEQALPSMPVRLLGLKTLPTPGEALMVVKSEERAQAV
VEARMAAKERQRYEEMEETEAMGMEDQIQLAEILEKNLVGGHRSGKKTKA
FLALQRGLVDDVLESSPMRKDGGGEEGRREGGRQQVVVPFLVKADGKGTL
EALTSALAGYDSDVIKAEVIGMGCGPVTEGDVERAKAAAARACDGGGEAC
TILAFNVGFVNGEVGEMARREGVSVKRQEVIYTLLDDVKATLQDHMPMER
VETSVGRMEVQATFALTGRRKARNTVAGCKVLSGAAFSGSQYRYRVMRKE
EGREEGVVVCDESPPATLYHFKEQVQEVKKGSECGLSLDGFGAFEAGDLI
ECYTVTMKPKQIGEIFRY*
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Synonyms
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