Naga_100232g3, gene4970 (gene) Nannochloropsis gaditana

Overview
NameNaga_100232g3
Unique Namegene4970
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:255008..259027 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100232g3
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:255008..259027 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0008135translation factor activity, RNA binding
GO:0016787hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL015ngnoL015Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G03160NO10G03160Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5149rna5149-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5149rna5149Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5149

>rna5149-protein ID=rna5149-protein|Name=rna5149|organism=Nannochloropsis gaditana|type=polypeptide|length=1112bp
MSRQLSATAFTLIISHSLPLGKLWRTPSTLRNFSNTARQHAGAASKHAAT
PRVGHSGRRKGQKSRDEAALSAIGLGESVHALPETLLEGSSLAHQAVNPL
ARLKPNGRAANSVNAASGNKLKVNAKDKTQQPSQQTTPLRGARKQEGSSG
GGRPKVKGAAAFLQQQRLGGQKAQSMLGNDTMNGVNGSAKDRFSNRVLPS
ESSSQPGNQLPSGRAALASGGRHGSIPPGKSGGNSMDMATYQRFSDLGQR
LANARTNLEQSQQRPGRRQQAWQPSSKPRLQASSAPSWPPPSNHEHPQYR
QEGFAGFALANGESVEKGKVSGNRLDRGRWGAPATAAAAPAAVSPIGAEH
VRLWEVDLGERKSASSRAPVLSREESHENQKIRSQELQQRQRRRQGRKGP
RLGRRLRALQRVPLVLPHEPIAVRELAQKLSLKMKDVGERVLRLGGSEEY
YNWNPETKVDLDVAELVGLELGRTVKRMAPPENLLEYRSRVREGRGGRRV
EWPLRPPVVCVMGHVDHGKTTLLDALRQSRVAAAEAGGITQRLGAFHIPG
VGEGGEEGGLGITVLDTPGHAAFRAMRMHGALATDIVLLVVSATDGLQEQ
TLEVLRMLEEQWAEEEEDFCMQRGGEGGKMEGFSPSLSLMVAVTKVDKLH
GEEEVQTALYKIEHALAAHGIMSEALGGDVQVVPVSAVTGAGLPDLLDRV
RLQAEMLELRADREGPGEGVILDAGMEKGLGMVMSVLMRWGSLAPGDVVV
AGEQWGRVKKILGARNSPGGPVDRALPSMPVRVLGLRDLPTPGQEVIVVK
SEERAEAVAKARREAAERRRYQETAATEVLGEEEQEQLQEILDKNLVGAN
VGGKKTKAYLALQRGAVDDLLDSASAKREGGQEGPVVVPFLVKADGKGTL
DAVTAALAAYEHDTIRTEVIGTGCGPVTEGDVEKAKGVAARECDGGGEAC
TILAFNVGFVNAEVGEMARREGVRVKKEDVIYTLLEQTKATLQEHMPWER
VETSVGKMEVQAMFTLTGKRRARNTVAGCKVVSGGVFSGQQYRYRVMRGG
EVVCKESPPATLYHFKEQVQEVKKGQECGLALEGFGAFEAGDVIECYTVT
EKQRSIAEVFPY
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Synonyms
Publications