NO10G01130, NO10G01130 (gene) Nannochloropsis oceanica

Overview
NameNO10G01130
Unique NameNO10G01130
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1752
Alignment locationchr10:341160..342911 -

Link to JBrowse

Properties
Property NameValue
DescriptionS-adenosylmethionine mitochondrial carrier
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr10genomechr10:341160..342911 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
IPR002067Mit_carrier
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO10G01130 vs. NCBI_GenBank
Match: EWM25420.1 (s-adenosylmethionine mitochondrial carrier [Nannochloropsis gaditana])

HSP 1 Score: 444.9 bits (1143), Expect = 3.000e-121
Identity = 248/354 (70.06%), Postives = 276/354 (77.97%), Query Frame = 0
Query:   26 SRSTVIDRRGMFKTASAMSLGLVLASRME---LPSLSSSSAADAATP-SLRPPLVS----ELEVLSTTLTVADTGTTINGTPSSPLQDFISGLAGGAASRASKELLLHPIDTWKTRLQYAKGDEEPAELFRNLYDGVWPALVVGTPAGAAFFATKDVLKGLAKTTFGSKYRILTTIGAVFIANFPYWLIRNPAEVLKTQQQTGLVDSSTAGVIEAVKEEGLGGLYRGYASNIAYAFPTDAIKFVVYEALQNQFTRKLNPLESSALGSAASSVAQLMSTPLDVVRTRIMTDCKSTGEADVP-----TASVWKTARTIAAEEGVGKLFSGLVPRLTRAFLSGAIQFGSYELTKAPF 367
            ++S  +DRR + KTAS  +LG +LA  +    LP +S  S A AAT  SL  P +     E    +      D   T +   SSPLQ+F+SGLAGGAASRASKEL LHPIDTWKTRLQYAKG+E PAELF+NLYDGVWPAL+VGTPAGAAFFATKDVLKGLA+ +FG+++R  TTI AVF AN PYWLIRNPAEVLKTQQQTGL+DS+  G IEAVK+EGL GLYRGY SNIAYAFPTDAIKFVVYEALQ  F+RKLNPLESS LGSAASSVAQLMSTPLDVVRTRIMTD  +    +VP     T SVW+TAR IAAEEGV KLFSGL PRLTRAFLSGAIQFGSYELTK  F
Sbjct:   85 NKSADVDRRNLLKTASVATLGCILAGSINSSPLPLISRPSNAKAATRLSLTDPALKVSRPEPSGKAQEAPRRDASDT-SSEQSSPLQEFLSGLAGGAASRASKELFLHPIDTWKTRLQYAKGNEAPAELFKNLYDGVWPALLVGTPAGAAFFATKDVLKGLARNSFGNEFREATTIAAVFAANIPYWLIRNPAEVLKTQQQTGLIDSTAGGTIEAVKQEGLEGLYRGYVSNIAYAFPTDAIKFVVYEALQKSFSRKLNPLESSVLGSAASSVAQLMSTPLDVVRTRIMTDEAALTNDNVPVSPASTTSVWQTARKIAAEEGVAKLFSGLFPRLTRAFLSGAIQFGSYELTKGAF 437          
BLAST of NO10G01130 vs. NCBI_GenBank
Match: XP_005855316.1 (s-adenosylmethionine mitochondrial carrier protein, partial [Nannochloropsis gaditana CCMP526] >EKU21044.1 s-adenosylmethionine mitochondrial carrier protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 443.7 bits (1140), Expect = 6.700e-121
Identity = 247/354 (69.77%), Postives = 276/354 (77.97%), Query Frame = 0
Query:   26 SRSTVIDRRGMFKTASAMSLGLVLASRME---LPSLSSSSAADAATP-SLRPPLVS----ELEVLSTTLTVADTGTTINGTPSSPLQDFISGLAGGAASRASKELLLHPIDTWKTRLQYAKGDEEPAELFRNLYDGVWPALVVGTPAGAAFFATKDVLKGLAKTTFGSKYRILTTIGAVFIANFPYWLIRNPAEVLKTQQQTGLVDSSTAGVIEAVKEEGLGGLYRGYASNIAYAFPTDAIKFVVYEALQNQFTRKLNPLESSALGSAASSVAQLMSTPLDVVRTRIMTDCKSTGEADVP-----TASVWKTARTIAAEEGVGKLFSGLVPRLTRAFLSGAIQFGSYELTKAPF 367
            ++S  +DRR + KTAS  +LG +LA  +    LP +S  S A AAT  SL  P +     E    +      D   T +   SSPLQ+F+SGLAGGAASRASKEL LHPIDTWKTRLQY+KG+E PAELF+NLYDGVWPAL+VGTPAGAAFFATKDVLKGLA+ +FG+++R  TTI AVF AN PYWLIRNPAEVLKTQQQTGL+DS+  G IEAVK+EGL GLYRGY SNIAYAFPTDAIKFVVYEALQ  F+RKLNPLESS LGSAASSVAQLMSTPLDVVRTRIMTD  +    +VP     T SVW+TAR IAAEEGV KLFSGL PRLTRAFLSGAIQFGSYELTK  F
Sbjct:   76 NKSAGVDRRNLLKTASVATLGCILAGSINSSPLPLISRPSNAKAATRLSLTDPALKVSRPEPSGKAQEAPRRDASDT-SSEQSSPLQEFLSGLAGGAASRASKELFLHPIDTWKTRLQYSKGNEAPAELFKNLYDGVWPALLVGTPAGAAFFATKDVLKGLARNSFGNEFREATTIAAVFAANIPYWLIRNPAEVLKTQQQTGLIDSTAGGTIEAVKQEGLEGLYRGYVSNIAYAFPTDAIKFVVYEALQKSFSRKLNPLESSVLGSAASSVAQLMSTPLDVVRTRIMTDEAALTNDNVPVSPASTTSVWQTARKIAAEEGVAKLFSGLFPRLTRAFLSGAIQFGSYELTKGAF 428          
BLAST of NO10G01130 vs. NCBI_GenBank
Match: CBJ29429.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 235.7 bits (600), Expect = 2.800e-58
Identity = 156/344 (45.35%), Postives = 198/344 (57.56%), Query Frame = 0
Query:   35 GMFKTASAMSLGLVLASRMELPSLSSSSAADAATP----SLRPPLVSELEVLSTTLTVADTGTTINGTPSSPLQDFISGLAGGAASRASKELLLHPIDTWKTRLQYAKGDEEPAELFRNLYDGVWPALVVGTPAGAAFFATKDVLKGLAKTTFGSKYRILTTIGAVFIANFPYWLIRNPAEVLKTQQQTGLVDSSTAGVIEA---VKEEGLGGLYRGYASNIAYAFPTDAIKFVVYEALQNQFTR-----KLNPLESSALGSAASSVAQLMSTPLDVVRTRIMTDCKSTGEADVPTASVWKTARTIAAEEGVGKLFSGLVPRLTRAFLSGAIQFGSYELTKAPF 367
            G   T+    LG +LAS   L  L+ ++AA+AA      S  P +  +LE            T +     S     ISGL  GAA   SK+LLL+P+DT KTRLQ  + D  P ELFR LYDGV P L+ G P+GA FF+ KD          G +Y  LTTI AV +A FPYW IR PAE+LK + Q GL   S AG   A   + +EGL GLY GY+SNIAYAFP DAIKF+VY AL+    +     KL+ +E++ LGS AS  AQ ++TPLDVVRTR+MT   +  + +     V     TI+ EE    L++G+ PR+ R+ LSGAIQFGSYE  K  F
Sbjct:   70 GAGSTSREQFLGGLLASSAAL--LACTAAANAAEQKAEVSNAPAVAGQLEYQQ------PQPTAVVPESESAASSAISGLVAGAAVSTSKQLLLYPVDTVKTRLQLPQ-DGSPPELFRGLYDGVLPPLLAGLPSGALFFSAKDAFSTAISNVSGGQYAELTTIAAVGLAQFPYWGIRTPAELLKIRSQAGLSSGSGAGFEGAKSILADEGLRGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKAKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMT---APSDDEGYEGGVLGALGTISREESFSALWAGINPRMARSVLSGAIQFGSYEFVKGLF 401          
BLAST of NO10G01130 vs. NCBI_GenBank
Match: CEM13673.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 214.9 bits (546), Expect = 5.100e-52
Identity = 145/368 (39.40%), Postives = 196/368 (53.26%), Query Frame = 0
Query:   20 RIRSSSSRSTVIDRRGMFKTASAMSLGLVLASRMELPSLSSSSAADAATPSLRPPLVSELEVLSTTLTVADTGTTINGTPSSPLQDFISGLAGGAASRASKELLLHPIDTWKTRLQYAKGDEEPAELFRNLYDGVWPALVVGTPAGAAFFATKDV-LKGLAKTTFGSKYRILTTIGAVFIANFPYWLIRNPAEVLKTQQQTGLVDSSTAGVIEAVKEEGLGGLYRGYASNIAYAFPTDAIKFVVYEALQNQFTRKLNPLESSALGSAASSVAQLMSTPLDVVRTRIMT-DCKSTGEADVPT----------------------ASVWKTARTIAAEEGVGKLFSGLVPRLTRAFLSGAIQFGSYELTK 364
            R  S S     + RR      S +S  L +          S   A AA P++  P         T+L     G    G      ++ ISGLAGG ASR  K+ +LHP+DT + RLQ      +   LF +LY G+ P LVVGTPA A FF  KD  +  LA+       ++ T+  AV  A+ PYWL+R P+EV+KT+ Q GL +++  G+ + V+++G+GGLY GY +NIAYA+PTD IKF+VY++L+     +L  LE +A GS AS  AQL + PLDV+RTR+MT D + T                             + +      IA EEG  +L+SG+ PRL RA LSGAIQFGSYEL K
Sbjct:   70 RASSLSDEQPRVGRRDHLNGGSLLSGLLTIGVATSAFHSPSDKVASAAVPAVPVP---------TSLPPEAGGA---GADKGLAKELISGLAGGGASRLGKDAILHPLDTLRARLQLRNQTND--GLFDDLYRGIVPPLVVGTPASALFFGVKDTSMAYLAQAGLSGNLQVRTS-AAVLAASVPYWLVRTPSEVVKTRCQAGLANNTLDGIRKTVEQDGIGGLYTGYNANIAYAYPTDVIKFLVYDSLKAALGGELTLLEKTAAGSLASCTAQLFTNPLDVIRTRLMTQDKRETSXXXXXXXXXXXXXXXXXXXXXXXXXXXYSGIVDCGMRIATEEGPARLWSGVSPRLVRAVLSGAIQFGSYELVK 422          
BLAST of NO10G01130 vs. NCBI_GenBank
Match: KOO35054.1 (s-adenosylmethionine mitochondrial carrier protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 209.1 bits (531), Expect = 2.800e-50
Identity = 138/323 (42.72%), Postives = 188/323 (58.20%), Query Frame = 0
Query:   53 MELPSLSSSSAADAATPSLRPP---LVSELEVLSTTLTVADTGTTI-NGTPSSPLQDFISGLAGGAASRASKELLLHPIDTWKTRLQYA---KGDEEPAELFRNLYDGVWPALVVGTPAGAAFFATKDVLKGLAKTTFGSKYRILTTIGAVFIANFPYWLIRNPAEVLKTQQQTGLVDSSTAGVIEAVKEEGLGGLYRGYASNIAYAFPTDAIKFVVYEALQNQFTR-----KLNPLESSALGSAASSVAQLMSTPLDVVRTRIMTDCKSTGEADVPTASVWKTARTIAAEEGVGKLFSGLVPRLTRAFLSGAIQFGSYELTK 364
            ME  +L+  S   A +  L  P    +      +TT  VA T T I   T +S   +F+SGL  G A +  KE+ LHP+DT KTRLQ     +G  +PA L++++Y G+ PA+V G PA + FFA KD +    K   G       T+ AV  AN  YWL+RNPAEV+K ++Q+G    S A      +E G GG YRGYASN+AYAFP D+ KFV+Y A+++ + R     KL+PLE++  G+ A+  AQ +STPLDV RTRIM     T  AD P   V  T + +A EEG+  L++GL P++ RA +SGA+QF   E  K
Sbjct:    1 MENRALTQISRRSAVSGVLLAPAAVAIGGARAGATTPPVAYTMTPIAAATDASTSTEFLSGLIAGFAQKTIKEVTLHPLDTVKTRLQLTSTRRGLLDPA-LYKDVYSGLAPAVVSGAPAASVFFAIKDSVLQQLKPQLGDTG---GTVAAVGCANLVYWLVRNPAEVIKVRRQSGGESDSAAAATALWREIGPGGFYRGYASNVAYAFPVDSSKFVLYSAIKDAWRRSKGGAKLSPLEAAVGGALATMAAQGVSTPLDVARTRIM-----TLPADQPAPGVLATLKAVADEEGLRGLYAGLAPKVARALVSGALQFSVLEGVK 314          
BLAST of NO10G01130 vs. NCBI_GenBank
Match: XP_005775564.1 (S-adenosylmethionine mitochondrial carrier protein [Emiliania huxleyi CCMP1516] >EOD23135.1 S-adenosylmethionine mitochondrial carrier protein [Emiliania huxleyi CCMP1516])

HSP 1 Score: 199.1 bits (505), Expect = 2.900e-47
Identity = 117/282 (41.49%), Postives = 164/282 (58.16%), Query Frame = 0
Query:   96 NGTPSSPLQDFISGLAGGAASRASKELLLHPIDTWKTRLQ------YAKGDEEP--AELFRNLYDGVWPALVVGTPAGAAFFATKDVLKGLAKTTFGSKY-RILTTIGAVFIANFPYWLIRNPAEVLKTQQQTGLVDSSTAGVIEAVKEEGLGGLYRGYASNIAYAFPTDAIKFVVYEALQNQFTRK-----LNPLESSALGSAASSVAQLMSTPLDVVRTRIMTDCKSTGEADVPTASVWKTARTIAAEEGVGKLFSGLVPRLTRAFLSGAIQFGSYELTK 364
            +  P S   +F SGL  GA  +  KEL LHP+DT K RLQ      +  G       ELF++ YDG+ PAL+ G PA +AFFA KD   G  +   G +  +  TT+ AV  AN  YW I+NP+EVLK ++Q G+   +    +E  + EG+ G Y     N AY+ P D +KF++YE L+  +  +     L+P+E++  G+AA++ AQ ++TPLDV R RIMT   +TG A         T R +AAEEG G L++G+ P++ RA  SGAIQF +YE TK
Sbjct:   67 SAVPPSAAAEFWSGLLAGAVQKTVKELALHPLDTAKARLQAPVAAGWTGGGRRAVLGELFKSPYDGLAPALISGAPAASAFFAVKD---GAKRAVAGLQLGKAETTVLAVACANVAYWGIKNPSEVLKVRRQAGVASDTAGAAVEIWRAEGVAGFYSSAGPNYAYSTPVDVVKFLLYEQLKASYAARRGRSGLSPVEAAVGGAAAAATAQALATPLDVARVRIMTS-DATGVA--------ATLRRVAAEEGAGALWAGVAPKVARALASGAIQFSTYEATK 336          
BLAST of NO10G01130 vs. NCBI_GenBank
Match: XP_005779767.1 (hypothetical protein EMIHUDRAFT_366662, partial [Emiliania huxleyi CCMP1516] >EOD27338.1 hypothetical protein EMIHUDRAFT_366662, partial [Emiliania huxleyi CCMP1516])

HSP 1 Score: 198.7 bits (504), Expect = 3.800e-47
Identity = 117/282 (41.49%), Postives = 164/282 (58.16%), Query Frame = 0
Query:   96 NGTPSSPLQDFISGLAGGAASRASKELLLHPIDTWKTRLQ------YAKGDEEP--AELFRNLYDGVWPALVVGTPAGAAFFATKDVLKGLAKTTFGSKY-RILTTIGAVFIANFPYWLIRNPAEVLKTQQQTGLVDSSTAGVIEAVKEEGLGGLYRGYASNIAYAFPTDAIKFVVYEALQNQFTRK-----LNPLESSALGSAASSVAQLMSTPLDVVRTRIMTDCKSTGEADVPTASVWKTARTIAAEEGVGKLFSGLVPRLTRAFLSGAIQFGSYELTK 364
            +  P S   +F SGL  GA  +  KEL LHP+DT K RLQ      +  G       ELF++ YDG+ PAL+ G PA +AFFA KD   G  +   G +  +  TT+ AV  AN  YW I+NP+EVLK ++Q G+   +    +E  + EG+ G Y     N AY+ P D +KF++YE L+  +  +     L+P+E++  G+AA++ AQ ++TPLDV R RIMT   +TG A         T R +AAEEG G L++G+ P++ RA  SGAIQF +YE TK
Sbjct:   67 SAVPPSAAAEFWSGLLAGAVQKTVKELALHPLDTAKARLQAPVAAGWTGGARRAVLGELFKSPYDGLAPALISGAPAASAFFAVKD---GAKRAVAGLQLGKAETTVLAVACANVAYWGIKNPSEVLKVRRQAGVASDTAGAAVEIWRAEGVAGFYSSAGPNYAYSTPVDVVKFLLYEQLKASYAARRGRSGLSPVEAAVGGAAAAATAQALATPLDVARVRIMTS-DATGVA--------ATLRRVAAEEGAGALWAGVAPKVARALASGAIQFSTYEATK 336          
BLAST of NO10G01130 vs. NCBI_GenBank
Match: XP_005538381.1 (probable mitochondrial carrier proteins; Pet8p [Cyanidioschyzon merolae strain 10D] >BAM82345.1 probable mitochondrial carrier proteins; Pet8p [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 176.4 bits (446), Expect = 2.000e-40
Identity = 109/267 (40.82%), Postives = 144/267 (53.93%), Query Frame = 0
Query:  102 PLQDFISGLAGGAASRASKELLLHPIDTWKTRLQYAKGDEEPAELFRNLYDGVWPALVVGTPAGAAFFATKDVLKGLAKTTFGSKYRILTTIGAVFIANFPYWLIRNPAEVLKTQQQTGLVDSSTAGVIEAVKEEGLGGLYRGYASNIAYAFPTDAIKFVVYEALQNQFTRK----LNPLESSALGSAASSVAQLMSTPLDVVRTRIMTDCKSTGEADVPTASVWKTARTIAAEEGVGKLFSGLVPRLTRAFLSGAIQFGSYELTKA 365
            P + F  GL  GAA+    +L+L P+DT KTRLQ   G    A+ FR +Y+G+ PA+V   PA AAFF T D LK      F      L  + A    +     +R P EV+K   Q G   SS   V   V +EG+ GLYRG+ S IA   P D ++F +YEA +  ++R+    L   ES+  GSAA  +A   +TPLDVV+TR+MT   S          +W T + IA EEG+G LFSG  PR+    L GA+ FG YE TK+
Sbjct:   40 PSESFRVGLISGAAAGTIADLVLFPLDTLKTRLQ-VPGSRLGAQTFRGIYNGILPAIVASAPAAAAFFGTYDWLKKTLTINFPQSAPPLVHMVAAVGGDLAGSFMRVPFEVVKQNLQAGYYRSSVDAVSAIVSKEGIRGLYRGWGSLIAREVPFDILEFPLYEAFKKIWSRRKGRALETWESALCGSAAGGIAAACTTPLDVVKTRLMTRSASAATQQ----GIWGTMQQIAREEGIGTLFSGTTPRILWISLGGALFFGGYEATKS 301          
BLAST of NO10G01130 vs. NCBI_GenBank
Match: XP_002177986.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC50800.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 174.5 bits (441), Expect = 7.600e-40
Identity = 114/275 (41.45%), Postives = 153/275 (55.64%), Query Frame = 0
Query:  109 GLAGGAASRASKELLLHPIDTWKTRLQYAKGDEEPAELFR---NLYDGVWPALVVGTPAGAAFFATKDVLKGLAKTTFGSKYRILTTIGAVFIANFPYWLIRNPAEVLKTQQQTGLVDSSTAGVIEAVKE-------------EGLGGLYRGYASNIAYAFPTDAIKFVVYEALQNQFTR---KLNPLESSALGSAASSVAQLMSTPLDVVRTRIM-TDCKSTGEADVPTASVWKTARTIAAEEGVGKLFSGLVPRLTRAFLSGAIQFGSYELTK 364
            G   G    A+K ++ +P+DT   RLQ    D    +LFR     Y GV   L+   PAGA FF  KD  K   + +      + TT+ AV +A  PYW +RNP+EV+KT+QQ   +D    G +EA ++              GL GLY GY  NI YAFP D IKFV Y+    QF+R    L P E +  G+AA+++AQ ++TPLDVVR RIM  + K +G  D  T S   +  T+A +EG+  LF+G  PR+ +A LSGAIQF +YE TK
Sbjct:    1 GFVAGGTLTATKTVVKYPLDTATVRLQMPNSDYSFRQLFRLFDGSYRGVANPLLANIPAGAIFFGVKDACKENLRVSTNLPRWVQTTL-AVAVAQVPYWAVRNPSEVVKTRQQAN-IDGYNVGPLEAYQKVIQDSMTKNGNATTGLEGLYTGYWENILYAFPADVIKFVCYD----QFSRGRKNLPPGEGAMAGAAATAIAQFVTTPLDVVRNRIMAVETKFSGN-DRVTPSYLDSLTTLARDEGLPGLFAGSSPRVGKAILSGAIQFATYEETK 268          
BLAST of NO10G01130 vs. NCBI_GenBank
Match: GAX10075.1 (hypothetical protein FisN_2Lh344 [Fistulifera solaris])

HSP 1 Score: 173.7 bits (439), Expect = 1.300e-39
Identity = 117/324 (36.11%), Postives = 173/324 (53.40%), Query Frame = 0
Query:   57 SLSSSSAADAATPSLRPPLVSELEVLSTTLTVADTGTTINGTPSSPLQDFISGLAGGAASRASKELLLHPIDTWKTRLQYAKGDE---EPAELFRNLYDGVWPALVVGTPAGAAFFATKDVLKGLAKTTF-GSKYRILTTIGAVFIANFPYWLIRNPAEVLKTQQQTGLV----DSSTAGVIEAVKEEGLG---------GLYRGYASNIAYAFPTDAIKFVVYEALQNQFTRKLNPLESSALGSAASSVAQLMSTPLDVVRTRIMTDCKSTGEADVPTASVWKTARTIAAEEGVGKLFSGLVPRLTRAFLSGAIQFGSYELTK 364
            +L++SS +  A  S  P  VS+              TT+  T    +Q+ +SG+  GA+   +K L+ +P+DT   RLQ         +   L +  Y G+   L+   PAGA FFA KD  K +  T++ G   + L+T  AV IA  PYWL+RNP+EV+KT+QQ G+      ++    +  V+E+ L          G Y GY  NI YA+P D +KFV+YE L     R + P E + +G+AA++++Q M+TPLDVVR R+M    +T        +   T   +A  EG+  LF+G  PR+ +A +SGAIQF +YE TK
Sbjct:   30 ALTASSPSTRAVESTEPKQVSD--------------TTLQRT----VQESLSGMVAGASLPVTKTLVKYPLDTATVRLQMPNSPYSIFDIPNLLKGSYRGITVPLLSNIPAGAVFFAVKDATKAILATSYAGDIPKWLSTSLAVGIAQIPYWLVRNPSEVVKTRQQAGIAGYVNTTNPWEAVARVREDILNNRTNVPLWEGYYVGYWENIWYAYPADVLKFVLYEQLAG--GRPVTPAEGAMVGAAATALSQFMTTPLDVVRNRLMAQTTTTEITKQSDTNYLTTLVGLAQTEGLSGLFAGAAPRVGKAMISGAIQFATYEETK 333          
The following BLAST results are available for this feature:
BLAST of NO10G01130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25420.13.000e-12170.06s-adenosylmethionine mitochondrial carrier [Nannoc... [more]
XP_005855316.16.700e-12169.77s-adenosylmethionine mitochondrial carrier protein... [more]
CBJ29429.12.800e-5845.35conserved unknown protein [Ectocarpus siliculosus][more]
CEM13673.15.100e-5239.40unnamed protein product [Vitrella brassicaformis C... [more]
KOO35054.12.800e-5042.72s-adenosylmethionine mitochondrial carrier protein... [more]
XP_005775564.12.900e-4741.49S-adenosylmethionine mitochondrial carrier protein... [more]
XP_005779767.13.800e-4741.49hypothetical protein EMIHUDRAFT_366662, partial [E... [more]
XP_005538381.12.000e-4040.82probable mitochondrial carrier proteins; Pet8p [Cy... [more]
XP_002177986.17.600e-4041.45predicted protein, partial [Phaeodactylum tricornu... [more]
GAX10075.11.300e-3936.11hypothetical protein FisN_2Lh344 [Fistulifera sola... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL053nonsL053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL052nonsL052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR004ncniR004Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR017ngnoR017Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR015ngnoR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000983NSK000983Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO10G01130.1NO10G01130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|629766gene_4104Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100005g137gene5159Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO10G01130.1NO10G01130.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO10G01130 ID=NO10G01130|Name=NO10G01130|organism=Nannochloropsis oceanica|type=gene|length=1752bp
ATGACAGCGGTTCGACCAAAAGACAACAGCAAAGGGGTAAAGATCACGCA
TGTAAAACGAATAAGAAGCAGCAGCTCCCGCTCTACTGTGATTGACCGTC
GGGGAATGTTCAAGACAGCCTCGGCAATGTCATTGGGCTTGGTACTGGCC
AGCCGCATGGAGCTGCCGTCATTGTCATCATCGTCAGCTGCCGACGCCGC
AACACCTTCATTGCGACCACCATTGGTATCAGAATTAGAAGTCTTATCTA
CAACACTTACAGTAGCTGACACTGGCACCACTATCAACGGAACGCCATCC
TCGCCCCTCCAAGACTTCATCTCAGGCCTGGCTGGCGGGGCCGCCTCCCG
AGCAAGCAAAGAGCTGCTCCTCCACCCCATCGATACATGGAAAACACGCT
TGCAATACGCCAAGGGTGACGAAGAGCCGGCGGAGCTGTTTCGAAATCTC
TATGATGGGGTGTGGCCGGCCTTGGTGGTTGGCACCCCTGCTGGGGCAGC
TTTTTTTGCCACGAAGGATGTACTCAAGGGACTTGCGAAGACCACCTTCG
GGAGTAAATATCGGATCCTAACCACAATCGGCGCTGTGTTTATTGCTAAT
TTCCCCTATTGGCTAATTCGGAACCCGGCGGAAGTCCTCAAGACGCAGCA
GCAGACGGGTTTGGTTGATAGTAGTACCGCAGGGGTGATCGAGGCAGTGA
AGGAAGAAGGGCTAGGGGGTCTCTATCGAGGATATGCATCCAATATTGCG
TATGCATTCCCAACGGATGCCATTAAATTTGTCGTGTATGAAGCATTGCA
AAACCAATTCACGCGGAAACTGAACCCTTTGGAGTCGTCCGCTTTGGGCT
CTGCGGCGAGCTCGGTGGCGCAGCTCATGTCTACTCCTTTGGACGTGGTC
AGGACGAGAATAATGACTGACTGTAAGTCTACAGGGGAGGCAGATGTGCC
GACAGCGTCGGTTTGGAAGACGGCACGCACGATTGCGGCGGAGGAAGGGG
TCGGGAAGTTGTTTAGTGGGCTGGTGCCACGCTTGACGAGGGCTTTTTTG
AGTGGAGCGATTCAGTTTGGGTCCTATGAATTAACGAAAGgtgcattcag
caatgcggggaagaagtaaatgagggcagtaagtaaaggcaaacgtgaag
gactttgctataaacggagttacctttggaaatggcacaacagttgccaa
cttcggtttggtgttctgccgggccttaattctttttgttgacaacgtca
aggccgaccgaatacataaaaatgatcaggaaattatgtgagatgcttca
ccgacgtttttctcccatgtgacgtaatctccaccctctcagCCCCTTTC
AAGACACACGCGACGCAATGTCCTCTTTCCTCGGGGTTTCAGGAAGAGTA
TAGAGAAATGCGCCTCAGTCATCATCATCCAGTCCTCGTGCGCACGTCCG
GTCACCCTCAGCTTTGCTGGCCCTCTCTCCGACTTGAGGACCCTGCTGGG
AACAAATGCTGCCTCTTACGCACGTATTTGGCAAGCATTTCCGACAATGG
CCAGCATAGAAGGAATGGAGGAAGgtaggatacgctgcttctgcttcatc
gacggctgcgagtttcgtgtgcaagcttgtggatggtcagccatgggtca
aggcgtaatatgcgcggaaaaagcctcatctctttcccttctattcactc
acatagGGACATAATAAGGCAGCAGGGGACCAGCAGCACGGAAGGACGGT
AG
back to top

protein sequence of NO10G01130.1

>NO10G01130.1-protein ID=NO10G01130.1-protein|Name=NO10G01130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=456bp
MTAVRPKDNSKGVKITHVKRIRSSSSRSTVIDRRGMFKTASAMSLGLVLA
SRMELPSLSSSSAADAATPSLRPPLVSELEVLSTTLTVADTGTTINGTPS
SPLQDFISGLAGGAASRASKELLLHPIDTWKTRLQYAKGDEEPAELFRNL
YDGVWPALVVGTPAGAAFFATKDVLKGLAKTTFGSKYRILTTIGAVFIAN
FPYWLIRNPAEVLKTQQQTGLVDSSTAGVIEAVKEEGLGGLYRGYASNIA
YAFPTDAIKFVVYEALQNQFTRKLNPLESSALGSAASSVAQLMSTPLDVV
RTRIMTDCKSTGEADVPTASVWKTARTIAAEEGVGKLFSGLVPRLTRAFL
SGAIQFGSYELTKAPFKTHATQCPLSSGFQEEYREMRLSHHHPVLVRTSG
HPQLCWPSLRLEDPAGNKCCLLRTYLASISDNGQHRRNGGRDIIRQQGTS
STEGR*
back to top
Synonyms
Publications