NO09G04300, NO09G04300 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G04300 vs. NCBI_GenBank
Match: EWM20344.1 (hypothetical protein Naga_100252g10 [Nannochloropsis gaditana]) HSP 1 Score: 311.2 bits (796), Expect = 3.800e-81 Identity = 159/326 (48.77%), Postives = 212/326 (65.03%), Query Frame = 0
Query: 24 HLQLHHPQPWTGYQALVPTLQPNINTTQYHVRIIIRVHHEHKELVQGLIHNLRHQQQF---FGSPTLSMDFALVPTELAGVPVTQEIARDFWSNPLDPFPHVYAVNLNESFFVAAKDRAASLKCTSKEAKEIARKHSKNAVRKVCQYDNHVYYQATDVAVQELLEGCNWCTHMLVTNDDNGYHPDFFRETLLTVPLPVKGDEPPKKKRFGNV------------PLKKQQQQRVLTAVEERRWDLVTTDFTTNGFYISAELKLGRLDLGGMLFSKEIVRKVGGFIAALPAKPRAIDAHNADWLFAEKAMIIGALAMVVKKLLFFHN 335
H +PW G Q L N +HVR IIRVHHE +LV+G++H+L +QQQ F PTLSMDFALVPTE+ G+PV IAR FW N +PFPHVYA++L+++FF A +RAA KC+ +EA+E+A + K A+ K+C+YDNHV+YQATDVAV EL C WCTH ++TN DN YHP++ +ETLL + +PP ++G V ++ ++ +R+L +WD+VTTDFTT+G LG +DLGG+LFSK I+ GFIA+LP+ RA AHNADWLFA +A+ +GA A VV +LLFFHN
Sbjct: 62 HQLQEESKPWLGSQGLRAPSVSNATNIHHHVRFIIRVHHEQADLVKGMVHSLLYQQQLSVSFPYPTLSMDFALVPTEVRGIPVVDSIARYFWLNTAEPFPHVYALDLDQTFFDVAAERAAPFKCSKEEAREVANRAGKAAMIKICRYDNHVFYQATDVAVAELCR-CTWCTHAVITNGDNCYHPNYLKETLLEL-------DPPSDAQYGTVQERSDSSSGLKGQIRDKKTRRMLAWERGEQWDMVTTDFTTSGILSRGAWGLGFVDLGGILFSKRILMSAQGFIASLPSGSRAEQAHNADWLFAARALRLGARAHVVNQLLFFHN 379
BLAST of NO09G04300 vs. NCBI_GenBank
Match: EWM29236.1 (hypothetical protein Naga_100119g17 [Nannochloropsis gaditana]) HSP 1 Score: 193.7 bits (491), Expect = 8.900e-46 Identity = 118/324 (36.42%), Postives = 156/324 (48.15%), Query Frame = 0
Query: 30 PQPWTGYQALVPTLQPNINTTQYHVRIIIRVHHEHKELVQGLIHNLRHQQQFF----GSPTLSMDFALVPTELAGVPVTQEIARDFWSNPLD--------------PFPHVYAVNLNESFFVAAKDRAASLKCTSKEAKEIARKHSKNAVRKVCQYDNHVYYQATDVAVQELLEGCNWCTHMLVTNDDNGYHPDFFRETLLTVPLPVKGDEPPKKKRFGNVPLKKQQQQRVLTAVEERRWDLVTTDFTTNG-FYISAELKLGRLDLGGMLFSKEIVRKVGGFIAALPAKPRAIDAHNADWLFAEKAMIIGALAMVVKKLLFFHN 335
P W G +P +YHVR+IIRVHH + LI +R Q Q GSP ++DFALV TE G+PV IA W D P P V+ + SF+ A +R+A +C++ + E K VR C YDNH YYQATDV + ++L GC WCTH+LVTN DN YHPDF L + DLVTTDF +G + A+ + G +DLGG+L SK +V K GGFIA+LP + H+ D+ F + + +GA +V KL+FFHN
Sbjct: 163 PAAWLGVG------RPPHRVGEYHVRVIIRVHHLQEAATHSLIWAMRAQPQAAQSQPGSPEFTVDFALVATEEQGLPVVHRIAEAEWRRVRDIDPLRSSDSLSVSPPAPDVFVADTTGSFYALASNRSAPYRCSAADEAEYYSKGGDYYVRLHCDYDNHAYYQATDVGMLDVLRGCAWCTHVLVTNSDNSYHPDFLLHAL------------------------------------SPQADLVTTDFIDHGERVVVADWRWGEVDLGGVLASKAVVMKTGGFIASLPPDAGPQETHDNDYWFVHRGLELGATTALVHKLMFFHN 444
BLAST of NO09G04300 vs. NCBI_GenBank
Match: EWM25935.1 (hypothetical protein Naga_100134g8 [Nannochloropsis gaditana]) HSP 1 Score: 108.6 bits (270), Expect = 3.800e-20 Identity = 63/178 (35.39%), Postives = 94/178 (52.81%), Query Frame = 0
Query: 53 HVRIIIRVHHEHKELVQGLIHNLRHQQQFFGSPTLSMDFALVPTELAGVPVTQEIARDFWSNPLDPFPHVYAVNLNESFFVAAKDRAASLKCTSKEAKEIARKHSKNAVRKVCQYDNHVYYQATDVAVQELLEGCNWCTHMLVTNDDNGYHPDFFRETL-LTVPLPVKGDEPPKKKRF 230
HVR++IR H + ++ LI+ LR Q + G DF LVPTE A + Q + + F +Y V L ++F+ K R + L CT ++ + + V + C +D++VYY ATD A+ + C CTH+LVTN DNGY P F RET+ + L + G P+K+ F
Sbjct: 62 HVRVVIRTHAREQLQLRSLIYGLRAQSE--GQAGFKADFVLVPTEPASLQTYQRLCNEMNVG----FDDLYLVELPDTFYEDVKLRDSRLTCTDAVRTRYVQEFNADEVHRYCDFDHYVYYAATDKALATFVLPCRSCTHVLVTNGDNGYAPSFLRETVRQSADLAIVGGIGPRKETF 233
BLAST of NO09G04300 vs. NCBI_GenBank
Match: XP_005854167.1 (hypothetical protein NGA_0179802 [Nannochloropsis gaditana CCMP526] >XP_005854270.1 hypothetical protein NGA_0179801 [Nannochloropsis gaditana CCMP526] >EKU22088.1 hypothetical protein NGA_0179801 [Nannochloropsis gaditana CCMP526] >EKU22190.1 hypothetical protein NGA_0179802 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 87.0 bits (214), Expect = 1.200e-13 Identity = 61/220 (27.73%), Postives = 98/220 (44.55%), Query Frame = 0
Query: 119 FPHVYAVNLNESFFVAAKDRAASLKCTSKEAKEIARKHSKNAVRKVCQYDNHVYYQATDVAVQELLEGCNWCTHMLVTNDDNGYHPDFFRETLLTVPLPVKGDEPPKKKRFGNVPLKKQQQQRVLTAVEERRWDLVTTDFTTNGFYISAELKLGRLDLGGMLFSKEIV---RKVGGFIAALPAKPRAIDAHNADWLFAEKAMIIG-ALAMVVKKLLFFHN 335
F +Y V L ++F+ K R + L CT ++ + + V + C +D++VYY ATD A+ + C CTH+LVTN DNGY P F +ET+ + DL FT + L +G LDLG +L ++ R++ F+++LP + H+AD+ A+ G + A+ +LL +HN
Sbjct: 5 FDDLYLVELPDTFYEDVKLRDSRLTCTDAVRTRYVQEFNADEVHRYCDFDHYVYYAATDKALATFVLPCRSCTHVLVTNGDNGYAPSFLQETV------------------------------------RQSADLAIVGFTHRNQAQTPVLGVGGLDLGAVLMRVGVLDHGRRL--FLSSLPVDAGPKEVHDADYWMVVNALERGLSFAVCKNQLLMYHN 186 The following BLAST results are available for this feature:
BLAST of NO09G04300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 4
Relationships
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G04300 ID=NO09G04300|Name=NO09G04300|organism=Nannochloropsis oceanica|type=gene|length=1005bpback to top protein sequence of NO09G04300.1 >NO09G04300.1-protein ID=NO09G04300.1-protein|Name=NO09G04300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=335bpback to top Synonyms
Publications
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