NO09G02250, NO09G02250 (gene) Nannochloropsis oceanica

Overview
NameNO09G02250
Unique NameNO09G02250
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2494
Alignment locationchr9:679753..682246 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:679753..682246 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO09G02250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010744NSK010744Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G02250.1NO09G02250.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|21464gene_4324Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G02250.1NO09G02250.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G02250 ID=NO09G02250|Name=NO09G02250|organism=Nannochloropsis oceanica|type=gene|length=2494bp
ATGATGCCTCCCCGAAGATTCGCCGCGTACGCCTCCCCTATCATTCCTCC
CCCCACCTTCCAATTTCGTCGTCCTCTACAAGCAGAGACTCAACCCTCCC
TCCTCCTTCCTCCTTTTCCTTTTCCTCCTCCACCTGCTTATCCCGCCTAC
ACCACCGCCCTCTCTCCTGAGCCCGTCACATCAGCAGCAGCAGGAGGAGA
AGGAGGGTTATCCTCTCTTTACCCGTCCTCCTCTTTCACTATGCGCCAGG
GCCGCACACGTAAGCCCTCTGAGAAAAAACTCGCGGCTCAAAAAGCCCAG
GAAGAGGGGGAGGACGAGAAGGAGGACGAGGAGGAAGACGAGGCAGACAA
TGGTGATGGGAAGAAAATTGTGTTAGGCATAGGAGAATGCGGTGACGTGG
ATTACTATCCCTCTTTTCTGGAGATGCGCGGAGAGGAGGAGTTGGAGGGT
GCTTCCGGTGTTTCTCGAAAGAAGGGGAAAGAGGAGGATGAGGAGGAGGA
GGACGAGAACGGCCCGGCCGCTGACTTGCATATTTACGCCCGAGATCTCA
ACCGCCTCCTCCACACCTCCTCCTCCCTCTCCTCCTCCTCCTCCTCCTCC
TCCTCCCCGTCTTCTTTCTCCTCTTTTTCTACCTCTATCTCTTCTTCGAT
GCATTTCGCTTCTTTCTCCCATCCCACCCACCTCCCTTTCCTCTTGCCCG
GGCAGCCTTTGAGAGATTGGAAGAAAAGCACTCTGAAGTCCTTGGCCGAC
GCCATCAATCTCCACCCCTCCGGGTGTCTGGTAAATCACGTGGTTGTCTC
CTCCGTGGTGGGAGGAAGGAGGGAGGAAAGGGGGAAGGAGGCCGTGGGGA
TGCTGGACCCGAGTTCGTCGTTATATTTGTTGACGGTGAGAGAAAGGGGG
GGAGAGAGAAAGAGGGTTAAAAGTGGAAGAAGCGGAGAAGGAGGAGGAGG
AGGAGGAGATGGAGGGAGGTTGAATGTGGAGTTGATGATCGGTAAGGAGG
GAGGGAAGAAAGAGAAGAAGGAGGAGTGCAGCATTCTTCGTCTTTGCTTG
CGACCTGGAAGCCTCCTTCGGGTCGGGTTGCGCACGGCTGGGCGCTTGAC
ACGTCGGACGTTCCAACAAGTGGAGGCGGAGAGCAAGCATAAGCCGTTGC
AGCAGCAGGAGGTGGTGGTCTGTTGCTTTCGGGCAGTGACGCATTTCTTG
GATACATGCACAGGCAGCCCTGTGGCACCTTTTACTGCTGCTGCTTCTAC
CGTTACTGCTACCGTTACTGCTACTGCTGCTGCTCTTGGTGTTGAGGCTA
AAAGCGGTTCCACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCACCACCT
CGGAAGCGTAAGACCCCAGCAGCAGCAGCAGCAGCAGCCGCCACAGCAGC
ATTGGCAGCACCGATGGAGAAAGGAGAGGGAATGGATGCAAAAAGCAGGG
AGAGGAAGAACACTGTTGCTGCTGCAGTTGTTGCTACTGATACTGCTATT
GCTGCTGCGGTTGGCAAGACACAGAAGAAGAGAGGAGGAGAGATGGGGGA
GTTGAAGAAAAAGGAAAAGGTGGTGAAGACGCAAAAGAAGGAGGTGGATT
CTTCGCAACGTAAGCTTAAGGCTCTCGTGAGAGGCAAGGCAGCGGTGACG
ATGGCGATAGTGGGGAGAAAAGGAGAAAGAGGAGGGAGGGGGAAAGGAGC
GGGTGCACTGGACGAGGAGAGGGAGGAGAAGGTGGAGGAAACGGCGCGCA
GGGAGGAGAAAGAGGGAGAGCCGACGGGTCAGCAGCAGCAGCAGCAGCAG
GTCCTTAAGGTGGAGAAGGGAGGGAGGGAGGAAGGGGTGAGGACCCGGGG
GCTCCGTGCAGTAAGCAATGTCCAGGCAAAAATTAAGACGGGCGAGGGCG
AGGACGAGGACGAGGAGAGCGGGGAGGAGGGAGGTGAAAATGGTAAAAAG
AGGCAGAGGAGCTCCAGGGAGCGAAATATAAGGGGACGAGTGTAGAGAGA
AGGTGTTAGAAGTATGTTTTACTATACGTGGTGGTTGGATAGGGGTGCTG
GGGGCAGGAGGAAGGTAGTTAGGAAGGAAACAAGTACATTTTTTGTGTGT
TGTTTGCATGTTTGTGTCTTCATTTCGGAGTAGAGGGAGAAGAGTGTATG
TTGGTTGGTGATTAGAGTTTGTGCATGTATGAGAGAGAGAAAGAAAAATA
GAGAGAAGAAATGCACTCGCTACTATAGGGAGGGTACACGAGTGTCTCAC
AGCGCGCGGGGGGAGACCATGGGATTGGGGGGGGGGTGTCCTTGTCAAAT
GTAGTATGAGTGGCATGGCTACGGCCCTTCGAGACAGTGTGTGAATGTAC
ATCGTGAAAGACACGCGAGAGTCCCGCAAGAGGTACAGTAGAAAAGTCAT
AAGAAAGAAAAAAGGAGAAAAGGAATCAACAGGCACAGACGACGTCTCCT
CGTCTCCCACCGATGTGCTGCACCTGTCAAAAAGAAAAAGACGC
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protein sequence of NO09G02250.1

>NO09G02250.1-protein ID=NO09G02250.1-protein|Name=NO09G02250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=665bp
MMPPRRFAAYASPIIPPPTFQFRRPLQAETQPSLLLPPFPFPPPPAYPAY
TTALSPEPVTSAAAGGEGGLSSLYPSSSFTMRQGRTRKPSEKKLAAQKAQ
EEGEDEKEDEEEDEADNGDGKKIVLGIGECGDVDYYPSFLEMRGEEELEG
ASGVSRKKGKEEDEEEEDENGPAADLHIYARDLNRLLHTSSSLSSSSSSS
SSPSSFSSFSTSISSSMHFASFSHPTHLPFLLPGQPLRDWKKSTLKSLAD
AINLHPSGCLVNHVVVSSVVGGRREERGKEAVGMLDPSSSLYLLTVRERG
GERKRVKSGRSGEGGGGGGDGGRLNVELMIGKEGGKKEKKEECSILRLCL
RPGSLLRVGLRTAGRLTRRTFQQVEAESKHKPLQQQEVVVCCFRAVTHFL
DTCTGSPVAPFTAAASTVTATVTATAAALGVEAKSGSTAAAAAAAAAAPP
RKRKTPAAAAAAAATAALAAPMEKGEGMDAKSRERKNTVAAAVVATDTAI
AAAVGKTQKKRGGEMGELKKKEKVVKTQKKEVDSSQRKLKALVRGKAAVT
MAIVGRKGERGGRGKGAGALDEEREEKVEETARREEKEGEPTGQQQQQQQ
VLKVEKGGREEGVRTRGLRAVSNVQAKIKTGEGEDEDEESGEEGGENGKK
RQRSSRERNIRGRV*
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Synonyms
Publications