NO09G02130, NO09G02130 (gene) Nannochloropsis oceanica

Overview
NameNO09G02130
Unique NameNO09G02130
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1661
Alignment locationchr9:652503..654163 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:652503..654163 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008146sulfotransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR010635Heparan_SO4-6-sulfoTrfase
IPR005331Sulfotransferase
Homology
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BLAST of NO09G02130 vs. NCBI_GenBank
Match: EWM30112.1 (hypothetical protein Naga_100310g2 [Nannochloropsis gaditana])

HSP 1 Score: 159.5 bits (402), Expect = 2.400e-35
Identity = 108/309 (34.95%), Postives = 160/309 (51.78%), Query Frame = 0 
Query:   86 FRDIHLMEKDQACLRAGHGYVHLLHMREAGGTSLLEVLLEKDGDSSITENRPPLKLFHSEGLTFNISCFTEGGSMVHITSLRNPIDRLVSSYWREGRYATYPGIAEGEAAGETEAGHQSAIEKHVEIFRSQYLQEPVHFKAYVQGLQEQYMQDTELLRTNQVWEGVDNFYVKTLTNRYRPNTTAPVDEEDLALAKRILDNIDVLLITEWMD-SEDESYKEEGKGQLELANYILGVDVAAFPRAHDKTLSLQQPLREIDSDTVAYLEDLNKYDMELYKYAQELLQSRIAGLRALQRQQAGAGGKLQAPLS 394
            FR    M + QAC RA  G   LLHMR+AGGT+L   L      S++ EN     ++ +EG TFN+SCF + G M+ +TSLR P+ R++SSYW EGRY   P             G   A+   +          P+ F+ +V+ +++             VW  VDN+YV+TLTNRYR NT A V + D  LA+RIL + DV++ITEWM  +   +Y +E  G+        G D +      +K + L+    EID +  A +   N +D+ LY++A+ L+  R+A     ++ Q GA  + +  LS
Sbjct:  141 FRRQAEMAQTQACFRARKGSAFLLHMRKAGGTTLRNYL------SALVENDREQLVYVAEGRTFNVSCFHDQGEMMILTSLRQPLARILSSYWYEGRYDYKP--------APLVPGTDPALAAAIYDETKAKAAVPLSFQDWVRYVRQMDYVRWTRASARGVWYSVDNYYVQTLTNRYRHNTYAEVGKHDYELARRILASFDVVMITEWMGWANQTAYVQESLGE-------KGKDPSRGMNQRNKLIRLRDD-TEIDREMFASVWRANTWDLLLYEFAKNLVTDRLAAFEK-EKLQVGAQERSKEALS 426
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BLAST of NO09G02130 vs. NCBI_GenBank
Match: XP_009037087.1 (hypothetical protein AURANDRAFT_71641 [Aureococcus anophagefferens] >EGB08367.1 hypothetical protein AURANDRAFT_71641 [Aureococcus anophagefferens])

HSP 1 Score: 73.9 bits (180), Expect = 1.300e-9
Identity = 89/345 (25.80%), Postives = 142/345 (41.16%), Query Frame = 0 
Query:   38 LSLCALALSCILFLRYYILQTTD----GAHNLAAKTPPKYPHQAFVVDWPHSFRDIHLMEKDQACLRAGHGYVHLLHMREAGGTSLLEVLLEKDGDSSITENRPPLKLFHSEGLTFNISCFTEGGSMVHITSLRNPIDRLVSSYWREGRYATYPGIAEGEAAGETEAGHQSAIEKHVEIFRSQYLQEPVHFKAYVQGLQEQYMQDTELLRTNQVWEGVDNFYVKTLTNRYRPNTTAPVDEEDLALAKRILDNIDVLLITE-WMDSEDESYKEEGKG-QLELANYILGVDVAAFPRAHDKTLSLQQPLREIDSDTVAYLEDLNKYDMELYKYAQELLQSRIAGLRA 377
            ++L     SC   L   +++T D         AA TP   P +  V+ W         +E+ +AC+ +G G  +L H R+A GTSL   L            R  +    +EGL+ + + F    S++ + SLR+P+ R++S YW E     + G+    +   T               RS +  E V   A+ +  ++++           V+  V+N++ K LT   R      +D   LA AK  LD  D + I E    +       +  G +L L + + G D +A  R       L+  L   ++D V +LE  N  D  LY YA  L   R+A   A
Sbjct:    5 VALALACASCRASLFASLVETHDDDAPADRREAAATPEAPPSKRDVLAWRSR------LERKRACVSSGVGAFYLYHARKAAGTSLRAALQH-------AAKRSRVDYLETEGLSID-ARFLGLRSVITVVSLRDPVRRVLSMYWYE-HVGWHDGVTHDHSKLRT--------------LRS-WADEWVEGSAWKREFEKKH--------PGNVYVEVENYFTKMLTGWNRDGRGEALDGASLASAKAALDRFDFVFIVERGRRANHTRLLWDALGYELPLTSELRG-DESAKAR-------LRPKLAADEADVVRFLEARNALDAALYAYALALDDDRVAASAA 303
The following BLAST results are available for this feature:
BLAST of NO09G02130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 2
Match NameE-valueIdentityDescription
EWM30112.12.400e-3534.95hypothetical protein Naga_100310g2 [Nannochloropsi... [more]
XP_009037087.11.300e-925.80hypothetical protein AURANDRAFT_71641 [Aureococcus... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G02130.1NO09G02130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G02130.1NO09G02130.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G02130 ID=NO09G02130|Name=NO09G02130|organism=Nannochloropsis oceanica|type=gene|length=1661bp
AAACAAGTATCAGAGACCCAGCACCCGCTGCATCCAGCCATGTCTTCGAC
CAGGCGACGCAGAGATCCTTTCTACCCCGCATCGTCATCGCCTTCGTCAT
GGACTGCGGCAGACAGAGACCACTATGAAGTCGGACCCGTCATGACCAAT
CTCTCGCTGTGCGCCCTCGCTTTATCCTGTATTCTGTTTCTGAGATATTA
TATCCTCCAGACGACTGATGGCGCACACAATCTTGCTGCCAAGACCCCCC
CGAAGTACCCTCATCAGGCATTTGTCGTGGATTGGCCACACAGCTTTCGT
GACATTCATCTCATGGAAAAGGACCAGGCATGCCTGCGGGCCGGTCATGG
TTACGTGCATTTACTGCACATGCGTGAGGCAGGCGGTACAAGTTTGCTAG
AGGTCCTGCTGGAGAAAGACGGGGACAGCAGCATTACAGAGAATCGTCCG
CCGCTCAAGCTTTTTCACAgtacgttgtcgggaagggtggtgcagaaaga
agccaatgtgtaaatgaaagatggggatgctcaatatctcccgcgcctat
tttaccgacgccatctttcatccttccctccctctttttgattcccccta
ccccattacccctttgtattcagGTGAGGGCCTGACCTTCAACATCAGCT
GCTTCACGGAAGGCGGGAGCATGGTCCACATCACCAGCCTCCGCAACCCC
ATCGACCGCTTGGTCAGCAGTTATTGGCGAGAAGGTCGCTATGCTACTTA
TCCCGGCATAGCTGAGGGGGAAGCTGCAGGAGAGACAGAGGCTGGCCATC
AAAGCGCCATCGAAAAACACGTCGAAATATTCCGCTCTCAGTACCTTCAA
GAGCCCGTCCACTTCAAAGCATATGTTCAAGGGCTCCAAGAACAGTACAT
GCAGGATACCGAGTTGTTGCGTACCAATCAAGTGTGGGAAGGCGTCGATA
ATTTCTATGTGAAAACACTCACGAATCGATATCGGCCCAACACAACCGCG
CCAGTCGACGAAGAAGACTTAGCACTAGCCAAGCGCATTTTGGACAACAT
AGACGTCCTTTTGATAACGGAATGGATGGATTCGGAAGATGAATCATACA
AGGAGGAAGGCAAAGGGCAATTGGAATTGGCTAACTACATCTTGGGCGTC
GACGTGGCGGCTTTCCCTCGTGCGCACGATAAGACCTTGTCACTGCAGCA
ACCTCTACGGGAGATTGATAGTGATACCGTCGCCTATCTCGAGGACCTCA
ACAAGTATGACATGGAGCTCTACAAATACGCACAAGAACTGCTCCAAAGT
CGCATTGCAGGCCTTCGTGCCTTGCAGCGGCAGCAGGCTGGAGCCGGAGG
GAAGTTGCAGGCGCCTTTGTCACCCGACATGGACACGTGCCGCGAGATGC
CGGCCGAGGGTGTGGTGTTGTCAGATGTACAGCTGTACACATTGTCAGTG
CCCGTGTGTATGCTACCACACCGAGATTTGGTAGAGTAGTGGTGGAGAAG
GAGGGAGAGTACAGGAGTAGGAGGGAGGAAAATAGGGATGTGGCTTTGCT
TTGTGAAGTAAGGGCTTTAGTCGCCTTTTCTGTCCATTGACATTTTATAA
AAAGTGTAGAATAACGAAAACTGTATGTGATGAAGAAGAAACAGTTCAAT
GAAATGAGAAA
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protein sequence of NO09G02130.1

>NO09G02130.1-protein ID=NO09G02130.1-protein|Name=NO09G02130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=432bp
MSSTRRRRDPFYPASSSPSSWTAADRDHYEVGPVMTNLSLCALALSCILF
LRYYILQTTDGAHNLAAKTPPKYPHQAFVVDWPHSFRDIHLMEKDQACLR
AGHGYVHLLHMREAGGTSLLEVLLEKDGDSSITENRPPLKLFHSEGLTFN
ISCFTEGGSMVHITSLRNPIDRLVSSYWREGRYATYPGIAEGEAAGETEA
GHQSAIEKHVEIFRSQYLQEPVHFKAYVQGLQEQYMQDTELLRTNQVWEG
VDNFYVKTLTNRYRPNTTAPVDEEDLALAKRILDNIDVLLITEWMDSEDE
SYKEEGKGQLELANYILGVDVAAFPRAHDKTLSLQQPLREIDSDTVAYLE
DLNKYDMELYKYAQELLQSRIAGLRALQRQQAGAGGKLQAPLSPDMDTCR
EMPAEGVVLSDVQLYTLSVPVCMLPHRDLVE*
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Synonyms
Publications