NO09G02030, NO09G02030 (gene) Nannochloropsis oceanica

Overview
NameNO09G02030
Unique NameNO09G02030
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3583
Alignment locationchr9:621881..625463 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:621881..625463 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO09G02030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL120nonsL120Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G02030.1NO09G02030.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670730gene_4348Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G02030.1NO09G02030.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G02030 ID=NO09G02030|Name=NO09G02030|organism=Nannochloropsis oceanica|type=gene|length=3583bp
GCAGCTTCAATTAGGGTAGGGTCGCGGGTACGACTCCAAAAGAGGGGACC
GAACCGTCGCTAGAATCCAACAGCTGCTTCAAGTTCTGCGGAGAGAAGAA
ATGACCAGCCCACCCACTCATGGCCCCTTGTGCATCCCCCTTGGGACTTA
TGATGTTGCGACATGGCTGTCTTTGTTCTTCTTCTCACCCTTTTGGTATT
CCTTAAAATTGTGCCGGTCTCTTCGGTGTGAGTCCGGTGCATCTTTCTTT
GCCAACGCAAGCAGCCTGCTGCCGCTCCCAAGCGAGGTGGTCGCTGCTGT
GGGCCATCGCCAATTGTACGACGGACACACACCACTGCTTCTTTTCCGTG
CACGAATGCTTTGGCAAGATGCTCCTATCATGATGCACTGGTCCTCACTA
TGTGTCGTTTCCCGAGCCTCTTGCGACATATTCCTTTCGCCGCTGTCCCT
GTCCTCTTTGAGGGCTTCGCTGTGTGGCCGCTGGCGTTTTTGTCTTCCTC
GTTCTCCCTTAGGGATATGGGAAGCCGGCTAGACAATCAGCACGGGGGGT
ATTATTACAAAGATGTCCGATAGCACACATAATTTACAATTCCCCACCGT
GCCGGGTTTCACTTGCCACAACTACAGGCCCACCGCTTGCCGAAACAATT
CGAAGACGTGGCCGCTTCGCAGTGCCTATTGAATATTCCAACACGCATTT
ATATCAGAATATTAAAATGTTATCAACAAgtaagtgtgatagaggtatgt
tccttcctgtccgtccctagccctccgtgagctgtggccgctttcactga
ctctttccccccactaaatggcccatccgagacatgccctcgtgctgtct
ccaccgagtcgcattctgcaccctgcttttccctcttttctattcaattc
catgtcattataggctaaaaagctcaacaacaccataaactcgttcactc
tgcccacatccaccctcaacaccacagCGACACCTCCAAAGCACCACAAG
AAGAAGACTTTCACTACCGTCTTTAAACATTCCCCTATCTCCATGTCCGG
CGCGGGGGCAGCAACAGCCTCCGGTGGAATTTCTTTCTCCTTCCAACAAG
GAGATAGCAGCGGTCCTGTCCGGGCTACTCACATGACCCTCAACATGACC
AAGACGACTGCTACCAATGCCATGGGCAGCAGTATCAGCAGCAGCAGCAG
CATCTGCAGTCGTAGCACCACTACCAAGAACAACAATAATAACACGGTGA
CGCGGACCGGTCTCGCAGTTATGTCCACTTCCTTTGCCTTGGGTTGGCGG
CAGCAACAGCATGAGAGGGATCCCTCCTCTCCGCCATCGTTCTTTCCTCT
CTCAGGCTACCAAGCAAGGCCGTCACCACCGACGACCCCTGAGCTCACGC
TGTCAGGACCTGTTAGAACGAATACGAAAACACAGCCGCGCCTACATTTC
CAGCAGCAGCAGCAGCAGCAACAACAACAACAGCAGCAGCTGGAAGAGGA
GAAGGAGGAGAAGCACGGGCAGCAGCAGCAGCATCAACAGCAGCATCAAC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGAGAGAACTTCGGCC
TTGTTGCTCGACGACAAGGACGACACGGATTTTTATGCTTTTTTGGATGC
TCATCCTCTAAATCTTGACGAGATAAATTTCCTCTCCCCAGCCCGCCTGG
TCCCCTCTTTCTCCCCGCGGTCGTTGAAGAAAGAGGCCTCGATCATGGCA
TTTGCTGTGGTTGGTGCTGCAGCCGATACCGCTCCTATTGCCAATGATAT
GATAACGACCGACATTTCTACCAAGAACCTATGTGCCAGTGACCTGTCCG
ACACCTGCCGTCGGAGCAGCAGTAGTAGCAGTGGTGGGTTTAATATCCAG
GCTCCGACACATCGCTTGAACAAGGACGGGAAACCACCTATTTTAAGTCG
CAGCATCAGCAACGACAGTTGCAGTAGTAGTACAAGCTCTTCTTCTTCCT
TTTCTTCAGCTTCGACAAGCAGTAGCAGCAGCGCCAACACTGTTATCCGA
AAAGCTGCAGGCAAGATTACTGCGAGAAAGACCGGCACTAGGAAATTCAA
GGCTCCTGCATCCCCTCCGCCTCGTCGTCGGTTCATTTCGTCCCCCTTTG
AGGTAGCTAAATTTCTCGACTGCATGGATGACGAGATCGAAGGTGCCACC
GACAACGAAAAGGAAAGAAGCAGCCATTCCCGAGGACGACCCTCGCTTAG
CAGCAGCAGCGGCAGCAGCAGCGGCAGCACAACTAACAACACTAACTGCA
GCAGGAGTACTTCCGCACCATTGTCCTTTTCGTCCCCTATGCGCTGCTGC
TTCTCCTTTAAGGACTGGGACGAGCGTCTGCAATCGCCTTCCATTGCTAC
CTCCTCCTCCCCCTCCTCCTCGTCCGCTTCCTCATCCTCCAAGACCCGGG
CAAAGATCACCCATACTACAAGTAGGCAATTGGCCAAACGAACCAAAAAG
GGTGCCACAGCTATTGAGACAGTACCAACAAAGGGAATGACAGCCGCAAG
AGTAGTAGCAAGGGCAGCAGCGACGACGAGGACAAAGTCTGAGACGCGCG
GACGAATCACGAAAAACAAAACCGAAGCTGCTGCTGCTGCTGCTGCTATT
GCCGTCACTCCATCCCAACAAGCAGACCTAGATCTCGTAGTCCCCTGCGG
CGAGACGCTGTCTTTTTCCACTCCTGAAAATTCTATGCCTGCGTATGAGA
CGCATGTGAACCCTTCGGAAATGTCGCCGCTGGTAATCCAAGTCCCTCAC
CCTTTCCTTCCCCTTGACGTGGGCTCGCTCGGTAGCGGCGCCACCACGAT
AGAGGGCGAGACCAGGGAAGAAGAGGAAGCGCAAGACTTTGAGGAGAAGG
ACGAAGCGCTCTCGAACTCTGCTTTGGATATCCTTATGTACGCATTTTCG
TCAGATGGGATGGCGGAACCCAATTTGTTGGGGGAGGTGCCTGTGGTGAG
CCAGGAGATCCAGGCTGCGGGTGGCCTCTTTTTCGAAGCATCCGACGGAA
GTGCCTGTGGTGAGTACGAAGATTACAGCTCTCAATGCCATTCCAGCATC
GTTCCGAGTTTCCTGGCGAACAAGGGATGACATTTTTCTCATCTGCTGCT
AACAGATCGGAACATGTGTGATATTTTGGGTGTGGGGTAGACTGATTACT
GTTTGTCAAAGAGGACTATACATGTGCGTGTTTGTGTGCATGTACCACTG
TAAGTGTTTCTGACTCAGTGCAGGATGCAAATATTTGCGATTACGATTTC
GCGCTTTTTTCCTTGTGGAGATCATATGATATGTGATTGTGGACCATAGC
TTCCAGCCCAGCCAATTGAGTAAAAAAAAAGTAAAGAAAGTGAAGAAAAT
CCTGCTCGGATTACGAGGGAAAGAACCAGCCGAAAAAAATGACAGAAGAG
TGCACGTTCTTAATGTGTAAGACGAAGATTAGTAACCAACCAGGAGAGTG
AAAAAAGGATATGATATGCCTCCTGCGCCAGCAAAGGTGTTGTACCATTC
AAAGAAAATATAAAATTGTTTGCGGTTTCTAAG
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protein sequence of NO09G02030.1

>NO09G02030.1-protein ID=NO09G02030.1-protein|Name=NO09G02030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=722bp
MLSTTTPPKHHKKKTFTTVFKHSPISMSGAGAATASGGISFSFQQGDSSG
PVRATHMTLNMTKTTATNAMGSSISSSSSICSRSTTTKNNNNNTVTRTGL
AVMSTSFALGWRQQQHERDPSSPPSFFPLSGYQARPSPPTTPELTLSGPV
RTNTKTQPRLHFQQQQQQQQQQQQQLEEEKEEKHGQQQQHQQQHQQQQQQ
QQQQQQEERTSALLLDDKDDTDFYAFLDAHPLNLDEINFLSPARLVPSFS
PRSLKKEASIMAFAVVGAAADTAPIANDMITTDISTKNLCASDLSDTCRR
SSSSSSGGFNIQAPTHRLNKDGKPPILSRSISNDSCSSSTSSSSSFSSAS
TSSSSSANTVIRKAAGKITARKTGTRKFKAPASPPPRRRFISSPFEVAKF
LDCMDDEIEGATDNEKERSSHSRGRPSLSSSSGSSSGSTTNNTNCSRSTS
APLSFSSPMRCCFSFKDWDERLQSPSIATSSSPSSSSASSSSKTRAKITH
TTSRQLAKRTKKGATAIETVPTKGMTAARVVARAAATTRTKSETRGRITK
NKTEAAAAAAAIAVTPSQQADLDLVVPCGETLSFSTPENSMPAYETHVNP
SEMSPLVIQVPHPFLPLDVGSLGSGATTIEGETREEEEAQDFEEKDEALS
NSALDILMYAFSSDGMAEPNLLGEVPVVSQEIQAAGGLFFEASDGSACGE
YEDYSSQCHSSIVPSFLANKG*
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Synonyms
Publications