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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr9 | genome | chr9:621881..625463 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO09G02030.1 ID=NO09G02030.1|Name=NO09G02030.1|organism=Nannochloropsis oceanica|type=mRNA|length=3335bp
GCAGCTTCAATTAGGGTAGGGTCGCGGGTACGACTCCAAAAGAGGGGACC
GAACCGTCGCTAGAATCCAACAGCTGCTTCAAGTTCTGCGGAGAGAAGAA
ATGACCAGCCCACCCACTCATGGCCCCTTGTGCATCCCCCTTGGGACTTA
TGATGTTGCGACATGGCTGTCTTTGTTCTTCTTCTCACCCTTTTGGTATT
CCTTAAAATTGTGCCGGTCTCTTCGGTGTGAGTCCGGTGCATCTTTCTTT
GCCAACGCAAGCAGCCTGCTGCCGCTCCCAAGCGAGGTGGTCGCTGCTGT
GGGCCATCGCCAATTGTACGACGGACACACACCACTGCTTCTTTTCCGTG
CACGAATGCTTTGGCAAGATGCTCCTATCATGATGCACTGGTCCTCACTA
TGTGTCGTTTCCCGAGCCTCTTGCGACATATTCCTTTCGCCGCTGTCCCT
GTCCTCTTTGAGGGCTTCGCTGTGTGGCCGCTGGCGTTTTTGTCTTCCTC
GTTCTCCCTTAGGGATATGGGAAGCCGGCTAGACAATCAGCACGGGGGGT
ATTATTACAAAGATGTCCGATAGCACACATAATTTACAATTCCCCACCGT
GCCGGGTTTCACTTGCCACAACTACAGGCCCACCGCTTGCCGAAACAATT
CGAAGACGTGGCCGCTTCGCAGTGCCTATTGAATATTCCAACACGCATTT
ATATCAGAATATTAAAATGTTATCAACAACGACACCTCCAAAGCACCACA
AGAAGAAGACTTTCACTACCGTCTTTAAACATTCCCCTATCTCCATGTCC
GGCGCGGGGGCAGCAACAGCCTCCGGTGGAATTTCTTTCTCCTTCCAACA
AGGAGATAGCAGCGGTCCTGTCCGGGCTACTCACATGACCCTCAACATGA
CCAAGACGACTGCTACCAATGCCATGGGCAGCAGTATCAGCAGCAGCAGC
AGCATCTGCAGTCGTAGCACCACTACCAAGAACAACAATAATAACACGGT
GACGCGGACCGGTCTCGCAGTTATGTCCACTTCCTTTGCCTTGGGTTGGC
GGCAGCAACAGCATGAGAGGGATCCCTCCTCTCCGCCATCGTTCTTTCCT
CTCTCAGGCTACCAAGCAAGGCCGTCACCACCGACGACCCCTGAGCTCAC
GCTGTCAGGACCTGTTAGAACGAATACGAAAACACAGCCGCGCCTACATT
TCCAGCAGCAGCAGCAGCAGCAACAACAACAACAGCAGCAGCTGGAAGAG
GAGAAGGAGGAGAAGCACGGGCAGCAGCAGCAGCATCAACAGCAGCATCA
ACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGAGAGAACTTCGG
CCTTGTTGCTCGACGACAAGGACGACACGGATTTTTATGCTTTTTTGGAT
GCTCATCCTCTAAATCTTGACGAGATAAATTTCCTCTCCCCAGCCCGCCT
GGTCCCCTCTTTCTCCCCGCGGTCGTTGAAGAAAGAGGCCTCGATCATGG
CATTTGCTGTGGTTGGTGCTGCAGCCGATACCGCTCCTATTGCCAATGAT
ATGATAACGACCGACATTTCTACCAAGAACCTATGTGCCAGTGACCTGTC
CGACACCTGCCGTCGGAGCAGCAGTAGTAGCAGTGGTGGGTTTAATATCC
AGGCTCCGACACATCGCTTGAACAAGGACGGGAAACCACCTATTTTAAGT
CGCAGCATCAGCAACGACAGTTGCAGTAGTAGTACAAGCTCTTCTTCTTC
CTTTTCTTCAGCTTCGACAAGCAGTAGCAGCAGCGCCAACACTGTTATCC
GAAAAGCTGCAGGCAAGATTACTGCGAGAAAGACCGGCACTAGGAAATTC
AAGGCTCCTGCATCCCCTCCGCCTCGTCGTCGGTTCATTTCGTCCCCCTT
TGAGGTAGCTAAATTTCTCGACTGCATGGATGACGAGATCGAAGGTGCCA
CCGACAACGAAAAGGAAAGAAGCAGCCATTCCCGAGGACGACCCTCGCTT
AGCAGCAGCAGCGGCAGCAGCAGCGGCAGCACAACTAACAACACTAACTG
CAGCAGGAGTACTTCCGCACCATTGTCCTTTTCGTCCCCTATGCGCTGCT
GCTTCTCCTTTAAGGACTGGGACGAGCGTCTGCAATCGCCTTCCATTGCT
ACCTCCTCCTCCCCCTCCTCCTCGTCCGCTTCCTCATCCTCCAAGACCCG
GGCAAAGATCACCCATACTACAAGTAGGCAATTGGCCAAACGAACCAAAA
AGGGTGCCACAGCTATTGAGACAGTACCAACAAAGGGAATGACAGCCGCA
AGAGTAGTAGCAAGGGCAGCAGCGACGACGAGGACAAAGTCTGAGACGCG
CGGACGAATCACGAAAAACAAAACCGAAGCTGCTGCTGCTGCTGCTGCTA
TTGCCGTCACTCCATCCCAACAAGCAGACCTAGATCTCGTAGTCCCCTGC
GGCGAGACGCTGTCTTTTTCCACTCCTGAAAATTCTATGCCTGCGTATGA
GACGCATGTGAACCCTTCGGAAATGTCGCCGCTGGTAATCCAAGTCCCTC
ACCCTTTCCTTCCCCTTGACGTGGGCTCGCTCGGTAGCGGCGCCACCACG
ATAGAGGGCGAGACCAGGGAAGAAGAGGAAGCGCAAGACTTTGAGGAGAA
GGACGAAGCGCTCTCGAACTCTGCTTTGGATATCCTTATGTACGCATTTT
CGTCAGATGGGATGGCGGAACCCAATTTGTTGGGGGAGGTGCCTGTGGTG
AGCCAGGAGATCCAGGCTGCGGGTGGCCTCTTTTTCGAAGCATCCGACGG
AAGTGCCTGTGGTGAGTACGAAGATTACAGCTCTCAATGCCATTCCAGCA
TCGTTCCGAGTTTCCTGGCGAACAAGGGATGACATTTTTCTCATCTGCTG
CTAACAGATCGGAACATGTGTGATATTTTGGGTGTGGGGTAGACTGATTA
CTGTTTGTCAAAGAGGACTATACATGTGCGTGTTTGTGTGCATGTACCAC
TGTAAGTGTTTCTGACTCAGTGCAGGATGCAAATATTTGCGATTACGATT
TCGCGCTTTTTTCCTTGTGGAGATCATATGATATGTGATTGTGGACCATA
GCTTCCAGCCCAGCCAATTGAGTAAAAAAAAAGTAAAGAAAGTGAAGAAA
ATCCTGCTCGGATTACGAGGGAAAGAACCAGCCGAAAAAAATGACAGAAG
AGTGCACGTTCTTAATGTGTAAGACGAAGATTAGTAACCAACCAGGAGAG
TGAAAAAAGGATATGATATGCCTCCTGCGCCAGCAAAGGTGTTGTACCAT
TCAAAGAAAATATAAAATTGTTTGCGGTTTCTAAG back to topprotein sequence of NO09G02030.1 >NO09G02030.1-protein ID=NO09G02030.1-protein|Name=NO09G02030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=722bp
MLSTTTPPKHHKKKTFTTVFKHSPISMSGAGAATASGGISFSFQQGDSSG
PVRATHMTLNMTKTTATNAMGSSISSSSSICSRSTTTKNNNNNTVTRTGL
AVMSTSFALGWRQQQHERDPSSPPSFFPLSGYQARPSPPTTPELTLSGPV
RTNTKTQPRLHFQQQQQQQQQQQQQLEEEKEEKHGQQQQHQQQHQQQQQQ
QQQQQQEERTSALLLDDKDDTDFYAFLDAHPLNLDEINFLSPARLVPSFS
PRSLKKEASIMAFAVVGAAADTAPIANDMITTDISTKNLCASDLSDTCRR
SSSSSSGGFNIQAPTHRLNKDGKPPILSRSISNDSCSSSTSSSSSFSSAS
TSSSSSANTVIRKAAGKITARKTGTRKFKAPASPPPRRRFISSPFEVAKF
LDCMDDEIEGATDNEKERSSHSRGRPSLSSSSGSSSGSTTNNTNCSRSTS
APLSFSSPMRCCFSFKDWDERLQSPSIATSSSPSSSSASSSSKTRAKITH
TTSRQLAKRTKKGATAIETVPTKGMTAARVVARAAATTRTKSETRGRITK
NKTEAAAAAAAIAVTPSQQADLDLVVPCGETLSFSTPENSMPAYETHVNP
SEMSPLVIQVPHPFLPLDVGSLGSGATTIEGETREEEEAQDFEEKDEALS
NSALDILMYAFSSDGMAEPNLLGEVPVVSQEIQAAGGLFFEASDGSACGE
YEDYSSQCHSSIVPSFLANKG* back to topmRNA from alignment at chr9:621881..625463+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO09G02030.1 ID=NO09G02030.1|Name=NO09G02030.1|organism=Nannochloropsis oceanica|type=mRNA|length=3583bp|location=Sequence derived from alignment at chr9:621881..625463+ (Nannochloropsis oceanica)
GCAGCTTCAATTAGGGTAGGGTCGCGGGTACGACTCCAAAAGAGGGGACC
GAACCGTCGCTAGAATCCAACAGCTGCTTCAAGTTCTGCGGAGAGAAGAA
ATGACCAGCCCACCCACTCATGGCCCCTTGTGCATCCCCCTTGGGACTTA
TGATGTTGCGACATGGCTGTCTTTGTTCTTCTTCTCACCCTTTTGGTATT
CCTTAAAATTGTGCCGGTCTCTTCGGTGTGAGTCCGGTGCATCTTTCTTT
GCCAACGCAAGCAGCCTGCTGCCGCTCCCAAGCGAGGTGGTCGCTGCTGT
GGGCCATCGCCAATTGTACGACGGACACACACCACTGCTTCTTTTCCGTG
CACGAATGCTTTGGCAAGATGCTCCTATCATGATGCACTGGTCCTCACTA
TGTGTCGTTTCCCGAGCCTCTTGCGACATATTCCTTTCGCCGCTGTCCCT
GTCCTCTTTGAGGGCTTCGCTGTGTGGCCGCTGGCGTTTTTGTCTTCCTC
GTTCTCCCTTAGGGATATGGGAAGCCGGCTAGACAATCAGCACGGGGGGT
ATTATTACAAAGATGTCCGATAGCACACATAATTTACAATTCCCCACCGT
GCCGGGTTTCACTTGCCACAACTACAGGCCCACCGCTTGCCGAAACAATT
CGAAGACGTGGCCGCTTCGCAGTGCCTATTGAATATTCCAACACGCATTT
ATATCAGAATATTAAAATGTTATCAACAAGTAAGTGTGATAGAGGTATGT
TCCTTCCTGTCCGTCCCTAGCCCTCCGTGAGCTGTGGCCGCTTTCACTGA
CTCTTTCCCCCCACTAAATGGCCCATCCGAGACATGCCCTCGTGCTGTCT
CCACCGAGTCGCATTCTGCACCCTGCTTTTCCCTCTTTTCTATTCAATTC
CATGTCATTATAGGCTAAAAAGCTCAACAACACCATAAACTCGTTCACTC
TGCCCACATCCACCCTCAACACCACAGCGACACCTCCAAAGCACCACAAG
AAGAAGACTTTCACTACCGTCTTTAAACATTCCCCTATCTCCATGTCCGG
CGCGGGGGCAGCAACAGCCTCCGGTGGAATTTCTTTCTCCTTCCAACAAG
GAGATAGCAGCGGTCCTGTCCGGGCTACTCACATGACCCTCAACATGACC
AAGACGACTGCTACCAATGCCATGGGCAGCAGTATCAGCAGCAGCAGCAG
CATCTGCAGTCGTAGCACCACTACCAAGAACAACAATAATAACACGGTGA
CGCGGACCGGTCTCGCAGTTATGTCCACTTCCTTTGCCTTGGGTTGGCGG
CAGCAACAGCATGAGAGGGATCCCTCCTCTCCGCCATCGTTCTTTCCTCT
CTCAGGCTACCAAGCAAGGCCGTCACCACCGACGACCCCTGAGCTCACGC
TGTCAGGACCTGTTAGAACGAATACGAAAACACAGCCGCGCCTACATTTC
CAGCAGCAGCAGCAGCAGCAACAACAACAACAGCAGCAGCTGGAAGAGGA
GAAGGAGGAGAAGCACGGGCAGCAGCAGCAGCATCAACAGCAGCATCAAC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGAGAGAACTTCGGCC
TTGTTGCTCGACGACAAGGACGACACGGATTTTTATGCTTTTTTGGATGC
TCATCCTCTAAATCTTGACGAGATAAATTTCCTCTCCCCAGCCCGCCTGG
TCCCCTCTTTCTCCCCGCGGTCGTTGAAGAAAGAGGCCTCGATCATGGCA
TTTGCTGTGGTTGGTGCTGCAGCCGATACCGCTCCTATTGCCAATGATAT
GATAACGACCGACATTTCTACCAAGAACCTATGTGCCAGTGACCTGTCCG
ACACCTGCCGTCGGAGCAGCAGTAGTAGCAGTGGTGGGTTTAATATCCAG
GCTCCGACACATCGCTTGAACAAGGACGGGAAACCACCTATTTTAAGTCG
CAGCATCAGCAACGACAGTTGCAGTAGTAGTACAAGCTCTTCTTCTTCCT
TTTCTTCAGCTTCGACAAGCAGTAGCAGCAGCGCCAACACTGTTATCCGA
AAAGCTGCAGGCAAGATTACTGCGAGAAAGACCGGCACTAGGAAATTCAA
GGCTCCTGCATCCCCTCCGCCTCGTCGTCGGTTCATTTCGTCCCCCTTTG
AGGTAGCTAAATTTCTCGACTGCATGGATGACGAGATCGAAGGTGCCACC
GACAACGAAAAGGAAAGAAGCAGCCATTCCCGAGGACGACCCTCGCTTAG
CAGCAGCAGCGGCAGCAGCAGCGGCAGCACAACTAACAACACTAACTGCA
GCAGGAGTACTTCCGCACCATTGTCCTTTTCGTCCCCTATGCGCTGCTGC
TTCTCCTTTAAGGACTGGGACGAGCGTCTGCAATCGCCTTCCATTGCTAC
CTCCTCCTCCCCCTCCTCCTCGTCCGCTTCCTCATCCTCCAAGACCCGGG
CAAAGATCACCCATACTACAAGTAGGCAATTGGCCAAACGAACCAAAAAG
GGTGCCACAGCTATTGAGACAGTACCAACAAAGGGAATGACAGCCGCAAG
AGTAGTAGCAAGGGCAGCAGCGACGACGAGGACAAAGTCTGAGACGCGCG
GACGAATCACGAAAAACAAAACCGAAGCTGCTGCTGCTGCTGCTGCTATT
GCCGTCACTCCATCCCAACAAGCAGACCTAGATCTCGTAGTCCCCTGCGG
CGAGACGCTGTCTTTTTCCACTCCTGAAAATTCTATGCCTGCGTATGAGA
CGCATGTGAACCCTTCGGAAATGTCGCCGCTGGTAATCCAAGTCCCTCAC
CCTTTCCTTCCCCTTGACGTGGGCTCGCTCGGTAGCGGCGCCACCACGAT
AGAGGGCGAGACCAGGGAAGAAGAGGAAGCGCAAGACTTTGAGGAGAAGG
ACGAAGCGCTCTCGAACTCTGCTTTGGATATCCTTATGTACGCATTTTCG
TCAGATGGGATGGCGGAACCCAATTTGTTGGGGGAGGTGCCTGTGGTGAG
CCAGGAGATCCAGGCTGCGGGTGGCCTCTTTTTCGAAGCATCCGACGGAA
GTGCCTGTGGTGAGTACGAAGATTACAGCTCTCAATGCCATTCCAGCATC
GTTCCGAGTTTCCTGGCGAACAAGGGATGACATTTTTCTCATCTGCTGCT
AACAGATCGGAACATGTGTGATATTTTGGGTGTGGGGTAGACTGATTACT
GTTTGTCAAAGAGGACTATACATGTGCGTGTTTGTGTGCATGTACCACTG
TAAGTGTTTCTGACTCAGTGCAGGATGCAAATATTTGCGATTACGATTTC
GCGCTTTTTTCCTTGTGGAGATCATATGATATGTGATTGTGGACCATAGC
TTCCAGCCCAGCCAATTGAGTAAAAAAAAAGTAAAGAAAGTGAAGAAAAT
CCTGCTCGGATTACGAGGGAAAGAACCAGCCGAAAAAAATGACAGAAGAG
TGCACGTTCTTAATGTGTAAGACGAAGATTAGTAACCAACCAGGAGAGTG
AAAAAAGGATATGATATGCCTCCTGCGCCAGCAAAGGTGTTGTACCATTC
AAAGAAAATATAAAATTGTTTGCGGTTTCTAAG back to topCoding sequence (CDS) from alignment at chr9:621881..625463+ >NO09G02030.1 ID=NO09G02030.1|Name=NO09G02030.1|organism=Nannochloropsis oceanica|type=CDS|length=2166bp|location=Sequence derived from alignment at chr9:621881..625463+ (Nannochloropsis oceanica)
ATGTTATCAACAACGACACCTCCAAAGCACCACAAGAAGAAGACTTTCAC
TACCGTCTTTAAACATTCCCCTATCTCCATGTCCGGCGCGGGGGCAGCAA
CAGCCTCCGGTGGAATTTCTTTCTCCTTCCAACAAGGAGATAGCAGCGGT
CCTGTCCGGGCTACTCACATGACCCTCAACATGACCAAGACGACTGCTAC
CAATGCCATGGGCAGCAGTATCAGCAGCAGCAGCAGCATCTGCAGTCGTA
GCACCACTACCAAGAACAACAATAATAACACGGTGACGCGGACCGGTCTC
GCAGTTATGTCCACTTCCTTTGCCTTGGGTTGGCGGCAGCAACAGCATGA
GAGGGATCCCTCCTCTCCGCCATCGTTCTTTCCTCTCTCAGGCTACCAAG
CAAGGCCGTCACCACCGACGACCCCTGAGCTCACGCTGTCAGGACCTGTT
AGAACGAATACGAAAACACAGCCGCGCCTACATTTCCAGCAGCAGCAGCA
GCAGCAACAACAACAACAGCAGCAGCTGGAAGAGGAGAAGGAGGAGAAGC
ACGGGCAGCAGCAGCAGCATCAACAGCAGCATCAACAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGGAGGAGAGAACTTCGGCCTTGTTGCTCGACGA
CAAGGACGACACGGATTTTTATGCTTTTTTGGATGCTCATCCTCTAAATC
TTGACGAGATAAATTTCCTCTCCCCAGCCCGCCTGGTCCCCTCTTTCTCC
CCGCGGTCGTTGAAGAAAGAGGCCTCGATCATGGCATTTGCTGTGGTTGG
TGCTGCAGCCGATACCGCTCCTATTGCCAATGATATGATAACGACCGACA
TTTCTACCAAGAACCTATGTGCCAGTGACCTGTCCGACACCTGCCGTCGG
AGCAGCAGTAGTAGCAGTGGTGGGTTTAATATCCAGGCTCCGACACATCG
CTTGAACAAGGACGGGAAACCACCTATTTTAAGTCGCAGCATCAGCAACG
ACAGTTGCAGTAGTAGTACAAGCTCTTCTTCTTCCTTTTCTTCAGCTTCG
ACAAGCAGTAGCAGCAGCGCCAACACTGTTATCCGAAAAGCTGCAGGCAA
GATTACTGCGAGAAAGACCGGCACTAGGAAATTCAAGGCTCCTGCATCCC
CTCCGCCTCGTCGTCGGTTCATTTCGTCCCCCTTTGAGGTAGCTAAATTT
CTCGACTGCATGGATGACGAGATCGAAGGTGCCACCGACAACGAAAAGGA
AAGAAGCAGCCATTCCCGAGGACGACCCTCGCTTAGCAGCAGCAGCGGCA
GCAGCAGCGGCAGCACAACTAACAACACTAACTGCAGCAGGAGTACTTCC
GCACCATTGTCCTTTTCGTCCCCTATGCGCTGCTGCTTCTCCTTTAAGGA
CTGGGACGAGCGTCTGCAATCGCCTTCCATTGCTACCTCCTCCTCCCCCT
CCTCCTCGTCCGCTTCCTCATCCTCCAAGACCCGGGCAAAGATCACCCAT
ACTACAAGTAGGCAATTGGCCAAACGAACCAAAAAGGGTGCCACAGCTAT
TGAGACAGTACCAACAAAGGGAATGACAGCCGCAAGAGTAGTAGCAAGGG
CAGCAGCGACGACGAGGACAAAGTCTGAGACGCGCGGACGAATCACGAAA
AACAAAACCGAAGCTGCTGCTGCTGCTGCTGCTATTGCCGTCACTCCATC
CCAACAAGCAGACCTAGATCTCGTAGTCCCCTGCGGCGAGACGCTGTCTT
TTTCCACTCCTGAAAATTCTATGCCTGCGTATGAGACGCATGTGAACCCT
TCGGAAATGTCGCCGCTGGTAATCCAAGTCCCTCACCCTTTCCTTCCCCT
TGACGTGGGCTCGCTCGGTAGCGGCGCCACCACGATAGAGGGCGAGACCA
GGGAAGAAGAGGAAGCGCAAGACTTTGAGGAGAAGGACGAAGCGCTCTCG
AACTCTGCTTTGGATATCCTTATGTACGCATTTTCGTCAGATGGGATGGC
GGAACCCAATTTGTTGGGGGAGGTGCCTGTGGTGAGCCAGGAGATCCAGG
CTGCGGGTGGCCTCTTTTTCGAAGCATCCGACGGAAGTGCCTGTGGTGAG
TACGAAGATTACAGCTCTCAATGCCATTCCAGCATCGTTCCGAGTTTCCT
GGCGAACAAGGGATGA back to top
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