NO09G01380, NO09G01380 (gene) Nannochloropsis oceanica

Overview
NameNO09G01380
Unique NameNO09G01380
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2132
Alignment locationchr9:447800..449931 -

Link to JBrowse

Properties
Property NameValue
DescriptionAP-1 complex subunit mu
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr9genomechr9:447800..449931 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0030131clathrin adaptor complex
GO:0016020membrane
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
GO:0006886intracellular protein transport
GO:0006810transport
Vocabulary: INTERPRO
TermDefinition
IPR036168AP2_Mu_C_sf
IPR011012Longin-like_dom
IPR010908Longin_dom
IPR028565MHD
IPR022775AP_mu_sigma_su
IPR001392Clathrin_mu
Homology
[Close]
BLAST of NO09G01380 vs. NCBI_GenBank
Match: EWM27656.1 (ap-1 complex subunit mu-1-like isoform 1 [Nannochloropsis gaditana])

HSP 1 Score: 839.7 bits (2168), Expect = 4.000e-240
Identity = 419/434 (96.54%), Postives = 428/434 (98.62%), Query Frame = 0 
Query:    1 MVASALFIMDLKGKIIISRNFRGDIPQTVSERFAIYLQEKEESEQRPVFTEDGYTFAYLKYNNLFLLSVTKRNSNVALMLVYLSRLVDVFKEYFGELEEESIRDNFVIIYELMDETMDFGYPQTTEAKILREYITQEGNRLEAAPRPPVALTNTVSWRSEGIKHRKNEIFLDVIEKLNLLVSANGTVLHSEIVGAIRMKSFLSGMPELKLGLNDKLMFEAAGRSVSASTKGKAIELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLSTQVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVDIIIPVPSDVDTPSFKASIGTVTYLPDKDAIVWSIKQFHGQREYLMRAHFGLPSIAAEGSSTSAAEKCWKKPVQIKFEIPYFTVSGIQVRYLKIIEKSGFAALPWVRYITCAGDVFMRMGT 435
            MVASALFIMDLKGKIIISRN+RGDIP TVSERFA YLQEKEESEQRP+FTE+G TFAYLKYNNLFLLSVTKRNSNVALMLVYLSRLVDVFKEYFGELEEESIRDNFVIIYELMDETMDFGYPQTTEAKILREYITQEGNRLEAAPRPPVALTNTVSWRSEGIKHRKNEIFLDVIEKLNLLVSANGTVLHSEI+GAIRMKSFLSGMPELKLGLNDKLMFEA+GR+VSASTKGKAIELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLSTQVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVDIIIPVPSDVDTPSFKASIGTVTYLPDKDAIVW IKQFHGQREYLMRAHFGLPSIAAEGSS +A EKCWKKPVQIKFEIPYFTVSGIQVRYLKIIEKSGFAALPWVRYITCAGDV++RMGT
Sbjct:    1 MVASALFIMDLKGKIIISRNYRGDIPMTVSERFATYLQEKEESEQRPIFTEEGCTFAYLKYNNLFLLSVTKRNSNVALMLVYLSRLVDVFKEYFGELEEESIRDNFVIIYELMDETMDFGYPQTTEAKILREYITQEGNRLEAAPRPPVALTNTVSWRSEGIKHRKNEIFLDVIEKLNLLVSANGTVLHSEIIGAIRMKSFLSGMPELKLGLNDKLMFEASGRAVSASTKGKAIELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLSTQVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVDIIIPVPSDVDTPSFKASIGTVTYLPDKDAIVWGIKQFHGQREYLMRAHFGLPSIAAEGSSANATEKCWKKPVQIKFEIPYFTVSGIQVRYLKIIEKSGFAALPWVRYITCAGDVYLRMGT 434
[Close]
BLAST of NO09G01380 vs. NCBI_GenBank
Match: CBJ29677.1 (Clathrin assembly complex, medium subunit [Ectocarpus siliculosus])

HSP 1 Score: 719.2 bits (1855), Expect = 7.900e-204
Identity = 357/432 (82.64%), Postives = 398/432 (92.13%), Query Frame = 0 
Query:    1 MVASALFIMDLKGKIIISRNFRGDIPQTVSERFAIYLQEKEESEQRPVFTEDGYTFAYLKYNNLFLLSVTKRNSNVALMLVYLSRLVDVFKEYFGELEEESIRDNFVIIYELMDETMDFGYPQTTEAKILREYITQEGNRLEAAPRPPVALTNTVSWRSEGIKHRKNEIFLDVIEKLNLLVSANGTVLHSEIVGAIRMKSFLSGMPELKLGLNDKLMFEAAGRSVSASTKGKAIELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLSTQVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVDIIIPVPSDVDTPSFKASIGTVTYLPDKDAIVWSIKQFHGQREYLMRAHFGLPSIAAEGSSTSAAEKCWKKPVQIKFEIPYFTVSGIQVRYLKIIEKSGFAALPWVRYITCAGDVFMRM 433
            MVASALFIMDLKGKIIISRNFRGD+P TVSE F+ ++QE+EE EQ+P+FT +G TF Y++YNNL L+S TKRNSNVALMLVYL +LVDVFK+YFGELEEESIRDNFVIIYEL+DETMDFGYPQT E+KILREYITQEGNRLEAAPRPPVALTN VSWRSEGIKHRKNEIFLDV+EKLNLL S+NGTVLHSEIVGA++MKSFLSGMPELKLGLNDKL+FE++GR  S+ TK KA+ELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRL+T VKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNV+IIIPVP+DVD+P+FKASIG+V YLPD+DA+VWSIKQF+G +EYLMRAHFGLPSI+AE +      + WK P+Q+KFEIPYFTVSGIQVRYLKIIEKSG+ ALPWVRYIT  GD  +RM
Sbjct:    1 MVASALFIMDLKGKIIISRNFRGDVPMTVSETFSNHIQEREEMEQKPIFTVEGVTFVYVQYNNLILMSATKRNSNVALMLVYLYKLVDVFKDYFGELEEESIRDNFVIIYELLDETMDFGYPQTMESKILREYITQEGNRLEAAPRPPVALTNAVSWRSEGIKHRKNEIFLDVVEKLNLLESSNGTVLHSEIVGAVKMKSFLSGMPELKLGLNDKLLFESSGR--SSGTK-KAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQDAVVWSIKQFNGSQEYLMRAHFGLPSISAEDA------REWKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRM 423
[Close]
BLAST of NO09G01380 vs. NCBI_GenBank
Match: XP_008913378.1 (hypothetical protein PPTG_17400 [Phytophthora parasitica INRA-310] >ETI34967.1 hypothetical protein F443_18647 [Phytophthora parasitica P1569] >ETK75253.1 hypothetical protein L915_18128 [Phytophthora parasitica] >ETL28680.1 hypothetical protein L916_18030 [Phytophthora parasitica] >ETL81909.1 hypothetical protein L917_17848 [Phytophthora parasitica] >ETM35135.1 hypothetical protein L914_17933 [Phytophthora parasitica] >ETN01277.1 hypothetical protein PPTG_17400 [Phytophthora parasitica INRA-310] >ETO63720.1 hypothetical protein F444_18642 [Phytophthora parasitica P1976] >ETP04788.1 hypothetical protein F441_18507 [Phytophthora parasitica CJ01A1] >KUF82143.1 AP-1 complex subunit mu-1 [Phytophthora nicotianae] >OWZ05358.1 Clathrin assembly complex protein [Phytophthora megakarya])

HSP 1 Score: 705.7 bits (1820), Expect = 9.100e-200
Identity = 344/432 (79.63%), Postives = 390/432 (90.28%), Query Frame = 0 
Query:    1 MVASALFIMDLKGKIIISRNFRGDIPQTVSERFAIYLQEKEESEQRPVFTEDGYTFAYLKYNNLFLLSVTKRNSNVALMLVYLSRLVDVFKEYFGELEEESIRDNFVIIYELMDETMDFGYPQTTEAKILREYITQEGNRLEAAPRPPVALTNTVSWRSEGIKHRKNEIFLDVIEKLNLLVSANGTVLHSEIVGAIRMKSFLSGMPELKLGLNDKLMFEAAGRSVSASTKGKAIELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLSTQVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVDIIIPVPSDVDTPSFKASIGTVTYLPDKDAIVWSIKQFHGQREYLMRAHFGLPSIAAEGSSTSAAEKCWKKPVQIKFEIPYFTVSGIQVRYLKIIEKSGFAALPWVRYITCAGDVFMRM 433
            MV SA+FI DLKGK+IISRN+RGDIP + S +F  Y+Q+K++SEQRPVFTEDGYTF YLK+NNL+L++VTK NSNVALML+YL+R+  VF++YFGELEEESIRDNFVII+EL+DETMD GYPQTTEA+ILREYITQEG+RLEAAPRPP ALTN VSWRSEGIKHRKNEIFLDV+EKLNLLVS+NGTVLHSEI+GA++MKSFLSGMPELKLGLNDK +FEA GRS   S+KGKA+E+EDIKFHQCVRLARFE+DRTISFIPPDGEFDLMTYRL+T VKPLIWVEAVVEPHS SRIEYM+KAKSQFKSRSIANNV+I+IPVP DVD+PSFK SIG+VTY+PD+DAIVWSIKQF+G REYLMRAHFGLPS+         A   WK P+Q+KFEIPYFTVSGIQVRYLKIIEKSG+ ALPWVRYIT  GD  +RM
Sbjct:    1 MVLSAVFITDLKGKVIISRNYRGDIPMSASSKFTRYVQDKDDSEQRPVFTEDGYTFVYLKHNNLYLMTVTKVNSNVALMLMYLTRICQVFRDYFGELEEESIRDNFVIIFELLDETMDHGYPQTTEARILREYITQEGHRLEAAPRPPTALTNAVSWRSEGIKHRKNEIFLDVVEKLNLLVSSNGTVLHSEIIGAVKMKSFLSGMPELKLGLNDKALFEATGRS---SSKGKAVEMEDIKFHQCVRLARFESDRTISFIPPDGEFDLMTYRLATHVKPLIWVEAVVEPHSRSRIEYMVKAKSQFKSRSIANNVEIVIPVPPDVDSPSFKCSIGSVTYVPDRDAIVWSIKQFNGSREYLMRAHFGLPSV-----DNHEATDDWKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRM 424
[Close]
BLAST of NO09G01380 vs. NCBI_GenBank
Match: XP_009518106.1 (hypothetical protein PHYSODRAFT_349597 [Phytophthora sojae] >EGZ22818.1 hypothetical protein PHYSODRAFT_349597 [Phytophthora sojae] >POM68822.1 AP-1 complex subunit mu [Phytophthora palmivora var. palmivora] >POM78145.1 AP-1 complex subunit mu [Phytophthora palmivora var. palmivora])

HSP 1 Score: 705.3 bits (1819), Expect = 1.200e-199
Identity = 344/432 (79.63%), Postives = 390/432 (90.28%), Query Frame = 0 
Query:    1 MVASALFIMDLKGKIIISRNFRGDIPQTVSERFAIYLQEKEESEQRPVFTEDGYTFAYLKYNNLFLLSVTKRNSNVALMLVYLSRLVDVFKEYFGELEEESIRDNFVIIYELMDETMDFGYPQTTEAKILREYITQEGNRLEAAPRPPVALTNTVSWRSEGIKHRKNEIFLDVIEKLNLLVSANGTVLHSEIVGAIRMKSFLSGMPELKLGLNDKLMFEAAGRSVSASTKGKAIELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLSTQVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVDIIIPVPSDVDTPSFKASIGTVTYLPDKDAIVWSIKQFHGQREYLMRAHFGLPSIAAEGSSTSAAEKCWKKPVQIKFEIPYFTVSGIQVRYLKIIEKSGFAALPWVRYITCAGDVFMRM 433
            MV SA+FI DLKGK+IISRN+RGDIP + S +F  Y+Q+K++SEQRPVFTEDGYTF YLK+NNL+L++VTK NSNVALML+YL+R+  VF++YFGELEEESIRDNFVII+EL+DETMD GYPQTTEA+ILREYITQEG+RLEAAPRPP ALTN VSWRSEGIKHRKNEIFLDV+EKLNLLVS+NGTVLHSEI+GA++MKSFLSGMPELKLGLNDK +FEA GRS   S+KGKA+E+EDIKFHQCVRLARFE+DRTISFIPPDGEFDLMTYRL+T VKPLIWVEAVVEPHS SRIEYM+KAKSQFKSRSIANNV+I+IPVP DVD+PSFK SIG+VTY+PD+DAIVWSIKQF+G REYLMRAHFGLPS+         A   WK P+Q+KFEIPYFTVSGIQVRYLKIIEKSG+ ALPWVRYIT  GD  +RM
Sbjct:    1 MVLSAVFITDLKGKVIISRNYRGDIPMSASAKFTRYVQDKDDSEQRPVFTEDGYTFVYLKHNNLYLMTVTKVNSNVALMLMYLTRICQVFRDYFGELEEESIRDNFVIIFELLDETMDHGYPQTTEARILREYITQEGHRLEAAPRPPTALTNAVSWRSEGIKHRKNEIFLDVVEKLNLLVSSNGTVLHSEIIGAVKMKSFLSGMPELKLGLNDKALFEATGRS---SSKGKAVEMEDIKFHQCVRLARFESDRTISFIPPDGEFDLMTYRLATHVKPLIWVEAVVEPHSRSRIEYMVKAKSQFKSRSIANNVEIVIPVPPDVDSPSFKCSIGSVTYVPDRDAIVWSIKQFNGSREYLMRAHFGLPSV-----DNHEATDDWKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRM 424
[Close]
BLAST of NO09G01380 vs. NCBI_GenBank
Match: ETP32967.1 (hypothetical protein F442_18448 [Phytophthora parasitica P10297])

HSP 1 Score: 703.4 bits (1814), Expect = 4.500e-199
Identity = 343/432 (79.40%), Postives = 389/432 (90.05%), Query Frame = 0 
Query:    1 MVASALFIMDLKGKIIISRNFRGDIPQTVSERFAIYLQEKEESEQRPVFTEDGYTFAYLKYNNLFLLSVTKRNSNVALMLVYLSRLVDVFKEYFGELEEESIRDNFVIIYELMDETMDFGYPQTTEAKILREYITQEGNRLEAAPRPPVALTNTVSWRSEGIKHRKNEIFLDVIEKLNLLVSANGTVLHSEIVGAIRMKSFLSGMPELKLGLNDKLMFEAAGRSVSASTKGKAIELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLSTQVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVDIIIPVPSDVDTPSFKASIGTVTYLPDKDAIVWSIKQFHGQREYLMRAHFGLPSIAAEGSSTSAAEKCWKKPVQIKFEIPYFTVSGIQVRYLKIIEKSGFAALPWVRYITCAGDVFMRM 433
            MV SA+FI DLKGK+IISRN+RGDIP + S +F  Y+Q+K++SEQRPVFTEDGYTF YLK+NNL+L++VTK NSNVALML+YL+R+  VF++YFGELEEESIRDNFVII+EL+DETMD GYPQTTEA+ILREYITQEG+RLEAAPRPP ALTN VSWRSEGIKHRKNEIFLDV+EKLNLLVS+NGTVLHSEI+GA++MKSFLSGMPELKLGLND  +FEA GRS   S+KGKA+E+EDIKFHQCVRLARFE+DRTISFIPPDGEFDLMTYRL+T VKPLIWVEAVVEPHS SRIEYM+KAKSQFKSRSIANNV+I+IPVP DVD+PSFK SIG+VTY+PD+DAIVWSIKQF+G REYLMRAHFGLPS+         A   WK P+Q+KFEIPYFTVSGIQVRYLKIIEKSG+ ALPWVRYIT  GD  +RM
Sbjct:    1 MVLSAVFITDLKGKVIISRNYRGDIPMSASSKFTRYVQDKDDSEQRPVFTEDGYTFVYLKHNNLYLMTVTKVNSNVALMLMYLTRICQVFRDYFGELEEESIRDNFVIIFELLDETMDHGYPQTTEARILREYITQEGHRLEAAPRPPTALTNAVSWRSEGIKHRKNEIFLDVVEKLNLLVSSNGTVLHSEIIGAVKMKSFLSGMPELKLGLNDMALFEATGRS---SSKGKAVEMEDIKFHQCVRLARFESDRTISFIPPDGEFDLMTYRLATHVKPLIWVEAVVEPHSRSRIEYMVKAKSQFKSRSIANNVEIVIPVPPDVDSPSFKCSIGSVTYVPDRDAIVWSIKQFNGSREYLMRAHFGLPSV-----DNHEATDDWKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRM 424
[Close]
BLAST of NO09G01380 vs. NCBI_GenBank
Match: XP_009039824.1 (hypothetical protein AURANDRAFT_72236 [Aureococcus anophagefferens] >EGB05442.1 hypothetical protein AURANDRAFT_72236 [Aureococcus anophagefferens])

HSP 1 Score: 702.6 bits (1812), Expect = 7.700e-199
Identity = 341/432 (78.94%), Postives = 389/432 (90.05%), Query Frame = 0 
Query:    1 MVASALFIMDLKGKIIISRNFRGDIPQTVSERFAIYLQEKEESEQRPVFTEDGYTFAYLKYNNLFLLSVTKRNSNVALMLVYLSRLVDVFKEYFGELEEESIRDNFVIIYELMDETMDFGYPQTTEAKILREYITQEGNRLEAAPRPPVALTNTVSWRSEGIKHRKNEIFLDVIEKLNLLVSANGTVLHSEIVGAIRMKSFLSGMPELKLGLNDKLMFEAAGRSVSASTKGKAIELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLSTQVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVDIIIPVPSDVDTPSFKASIGTVTYLPDKDAIVWSIKQFHGQREYLMRAHFGLPSIAAEGSSTSAAEKCWKKPVQIKFEIPYFTVSGIQVRYLKIIEKSGFAALPWVRYITCAGDVFMRM 433
            M  S +F+MDLKG++IISRN+RGD+P +VSERF  YLQE +E +QRP+FT++G+TFAY K+NNLFL+ VTKRNSN+AL+L+YL RLV VFK+YFGEL+EESIRDNFVIIYELMDETMDFGYPQ  ++KILRE+ITQE NR E APRPP+A+TN VSWRSEGIKHRKNEIFLDVIE+LNLLV+ NGTVL+SEI+GAI+MKSFLSGMPELKLGLNDKLMFEA GR +   T+GKA+ELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLST VKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRS+ANNVDIIIPVP DVD+PSFK+SIGTVTYLPD++ IVWSIKQF+G REYLMRAHFGLPS+++E        + WK P+++KFEIPYFTVSGIQVRYLKIIEKSG+ ALPWVRYIT  GD  +RM
Sbjct:    1 MTLSCIFVMDLKGRVIISRNYRGDVPMSVSERFVQYLQENDEMDQRPIFTDEGFTFAYTKHNNLFLMCVTKRNSNIALLLMYLYRLVTVFKDYFGELDEESIRDNFVIIYELMDETMDFGYPQAMDSKILREFITQESNRHETAPRPPIAVTNAVSWRSEGIKHRKNEIFLDVIERLNLLVAGNGTVLNSEIIGAIKMKSFLSGMPELKLGLNDKLMFEATGRPM---TRGKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLSTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSVANNVDIIIPVPHDVDSPSFKSSIGTVTYLPDRNVIVWSIKQFNGAREYLMRAHFGLPSVSSED------PEHWKAPIEVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRM 423
[Close]
BLAST of NO09G01380 vs. NCBI_GenBank
Match: XP_008875643.1 (hypothetical protein H310_10930 [Aphanomyces invadans] >ETV95892.1 hypothetical protein H310_10930 [Aphanomyces invadans])

HSP 1 Score: 697.2 bits (1798), Expect = 3.200e-197
Identity = 341/434 (78.57%), Postives = 394/434 (90.78%), Query Frame = 0 
Query:    1 MVASALFIMDLKGKIIISRNFRGDIPQTVSERFAIYLQEKEESEQRPVFT--EDGYTFAYLKYNNLFLLSVTKRNSNVALMLVYLSRLVDVFKEYFGELEEESIRDNFVIIYELMDETMDFGYPQTTEAKILREYITQEGNRLEAAPRPPVALTNTVSWRSEGIKHRKNEIFLDVIEKLNLLVSANGTVLHSEIVGAIRMKSFLSGMPELKLGLNDKLMFEAAGRSVSASTKGKAIELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLSTQVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVDIIIPVPSDVDTPSFKASIGTVTYLPDKDAIVWSIKQFHGQREYLMRAHFGLPSIAAEGSSTSAAEKCWKKPVQIKFEIPYFTVSGIQVRYLKIIEKSGFAALPWVRYITCAGDVFMRM 433
            MV SA+FI DLKGKIIISRN+RGDIP +V+E+F  Y+ EK+++EQRPVFT  E G TF Y+KYNNL+L++VTK NSNVALML+YL+R+  VF+EYFGELEEESIRDNFVII+EL+DETMD GYPQTTEA+ILREYITQEG+R+E+APRPP ALTN VSWRSEGIKHRKNEIFLDV+EKLNLLV++NGTVLHSEI+GA++MKSFLSGMPELKLGLNDK++FEA GR  S+S+KGKA+E+EDIKFHQCVRLARFE DRTISFIPPDGEFDLMTYRL+T VKPLIWVEAVVEPHS SRIEYM+K KSQFKSRSIANNV+I+IPVP DVD+PSFK SIG+VTY+PD+DAIVW+IKQF+G REYLMRAHFGLPSI+   ++ +AA   WK P+Q+KFEIPYFTVSGIQVRYLKIIEKSG+ ALPWVRYIT  GD  +RM
Sbjct:    1 MVLSAVFITDLKGKIIISRNYRGDIPMSVAEKFTQYVTEKDDNEQRPVFTNEESGITFVYIKYNNLYLMTVTKVNSNVALMLMYLNRICQVFQEYFGELEEESIRDNFVIIFELLDETMDHGYPQTTEARILREYITQEGHRMESAPRPPTALTNAVSWRSEGIKHRKNEIFLDVVEKLNLLVASNGTVLHSEILGAVKMKSFLSGMPELKLGLNDKMLFEATGR--SSSSKGKAVEMEDIKFHQCVRLARFETDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSRSRIEYMVKTKSQFKSRSIANNVEIVIPVPPDVDSPSFKCSIGSVTYVPDRDAIVWTIKQFNGSREYLMRAHFGLPSIS---NTNTAATDEWKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRM 429
[Close]
BLAST of NO09G01380 vs. NCBI_GenBank
Match: KUF97917.1 (SAGA-associated factor 29 [Phytophthora nicotianae])

HSP 1 Score: 695.3 bits (1793), Expect = 1.200e-196
Identity = 344/448 (76.79%), Postives = 390/448 (87.05%), Query Frame = 0 
Query:    1 MVASALFIMDLKGKIIISRNFRGDIPQTVSERFAIYLQEKEESEQRPVFTEDGYTFAYLK----------------YNNLFLLSVTKRNSNVALMLVYLSRLVDVFKEYFGELEEESIRDNFVIIYELMDETMDFGYPQTTEAKILREYITQEGNRLEAAPRPPVALTNTVSWRSEGIKHRKNEIFLDVIEKLNLLVSANGTVLHSEIVGAIRMKSFLSGMPELKLGLNDKLMFEAAGRSVSASTKGKAIELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLSTQVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVDIIIPVPSDVDTPSFKASIGTVTYLPDKDAIVWSIKQFHGQREYLMRAHFGLPSIAAEGSSTSAAEKCWKKPVQIKFEIPYFTVSGIQVRYLKIIEKSGFAALPWVRYITCAGDVFMRM 433
            MV SA+FI DLKGK+IISRN+RGDIP + S +F  Y+Q+K++SEQRPVFTEDGYTF YLK                +NNL+L++VTK NSNVALML+YL+R+  VF++YFGELEEESIRDNFVII+EL+DETMD GYPQTTEA+ILREYITQEG+RLEAAPRPP ALTN VSWRSEGIKHRKNEIFLDV+EKLNLLVS+NGTVLHSEI+GA++MKSFLSGMPELKLGLNDK +FEA GRS   S+KGKA+E+EDIKFHQCVRLARFE+DRTISFIPPDGEFDLMTYRL+T VKPLIWVEAVVEPHS SRIEYM+KAKSQFKSRSIANNV+I+IPVP DVD+PSFK SIG+VTY+PD+DAIVWSIKQF+G REYLMRAHFGLPS+         A   WK P+Q+KFEIPYFTVSGIQVRYLKIIEKSG+ ALPWVRYIT  GD  +RM
Sbjct:    1 MVLSAVFITDLKGKVIISRNYRGDIPMSASSKFTRYVQDKDDSEQRPVFTEDGYTFVYLKVLQFHIVITVYKYAYYHNNLYLMTVTKVNSNVALMLMYLTRICQVFRDYFGELEEESIRDNFVIIFELLDETMDHGYPQTTEARILREYITQEGHRLEAAPRPPTALTNAVSWRSEGIKHRKNEIFLDVVEKLNLLVSSNGTVLHSEIIGAVKMKSFLSGMPELKLGLNDKALFEATGRS---SSKGKAVEMEDIKFHQCVRLARFESDRTISFIPPDGEFDLMTYRLATHVKPLIWVEAVVEPHSRSRIEYMVKAKSQFKSRSIANNVEIVIPVPPDVDSPSFKCSIGSVTYVPDRDAIVWSIKQFNGSREYLMRAHFGLPSV-----DNHEATDDWKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRM 440
[Close]
BLAST of NO09G01380 vs. NCBI_GenBank
Match: OQR81826.1 (AP-1 complex subunit mu [Thraustotheca clavata])

HSP 1 Score: 694.1 bits (1790), Expect = 2.700e-196
Identity = 338/434 (77.88%), Postives = 392/434 (90.32%), Query Frame = 0 
Query:    1 MVASALFIMDLKGKIIISRNFRGDIPQTVSERFAIYLQEKEESEQRPVFT--EDGYTFAYLKYNNLFLLSVTKRNSNVALMLVYLSRLVDVFKEYFGELEEESIRDNFVIIYELMDETMDFGYPQTTEAKILREYITQEGNRLEAAPRPPVALTNTVSWRSEGIKHRKNEIFLDVIEKLNLLVSANGTVLHSEIVGAIRMKSFLSGMPELKLGLNDKLMFEAAGRSVSASTKGKAIELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLSTQVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVDIIIPVPSDVDTPSFKASIGTVTYLPDKDAIVWSIKQFHGQREYLMRAHFGLPSIAAEGSSTSAAEKCWKKPVQIKFEIPYFTVSGIQVRYLKIIEKSGFAALPWVRYITCAGDVFMRM 433
            MV SA+F+ DLKGKIIISRN+RGDIP +++E+F  Y+ EK++SEQRPVFT  E G TF Y+K+NNL+L++VTK NSNVALML+YL+R+  VF++YFGELEEESIRDNFVII+EL+DET+D GYPQTTEA+ILREYITQEG+R+EAAPRPP ALTN VSWRSEGIKHRKNEIFLDV+EKLNLLV++NGTVLHSEI+GA++MKSFLSGMPELKLGLNDK++FEA GRS + S+KGKA+E+EDIKFHQCVRLARFE DRTISFIPPDGEFDLMTYRL+T VKPLIWVEAVVEPHS SRIEYMIK KSQFKSRSIANNV+I+IPVP DVD+PSFK SIG+VTY+PD+DAIVW+IKQF+G REY MRAHFGLPSI+   ++TS     WK P+Q+KFEIPYFTVSGIQVRYLKIIEKSG+ ALPWVRYIT  GD  +RM
Sbjct:  604 MVLSAVFVTDLKGKIIISRNYRGDIPMSIAEKFTAYVTEKDDSEQRPVFTNEESGVTFVYIKFNNLYLMTVTKVNSNVALMLMYLNRICQVFQDYFGELEEESIRDNFVIIFELLDETIDHGYPQTTEARILREYITQEGHRMEAAPRPPTALTNAVSWRSEGIKHRKNEIFLDVVEKLNLLVASNGTVLHSEILGAVKMKSFLSGMPELKLGLNDKMLFEATGRS-TTSSKGKAVEMEDIKFHQCVRLARFETDRTISFIPPDGEFDLMTYRLNTHVKPLIWVEAVVEPHSRSRIEYMIKTKSQFKSRSIANNVEIVIPVPPDVDSPSFKCSIGSVTYVPDRDAIVWTIKQFNGSREYAMRAHFGLPSISNSNTATSDE---WKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRM 1033
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BLAST of NO09G01380 vs. NCBI_GenBank
Match: OQR98282.1 (AP-1 complex subunit mu [Achlya hypogyna])

HSP 1 Score: 693.3 bits (1788), Expect = 4.700e-196
Identity = 338/434 (77.88%), Postives = 391/434 (90.09%), Query Frame = 0 
Query:    1 MVASALFIMDLKGKIIISRNFRGDIPQTVSERFAIYLQEKEESEQRPVFTED--GYTFAYLKYNNLFLLSVTKRNSNVALMLVYLSRLVDVFKEYFGELEEESIRDNFVIIYELMDETMDFGYPQTTEAKILREYITQEGNRLEAAPRPPVALTNTVSWRSEGIKHRKNEIFLDVIEKLNLLVSANGTVLHSEIVGAIRMKSFLSGMPELKLGLNDKLMFEAAGRSVSASTKGKAIELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLSTQVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVDIIIPVPSDVDTPSFKASIGTVTYLPDKDAIVWSIKQFHGQREYLMRAHFGLPSIAAEGSSTSAAEKCWKKPVQIKFEIPYFTVSGIQVRYLKIIEKSGFAALPWVRYITCAGDVFMRM 433
            MV SA+F+ DLKGKIIISRN+RGDIP +++E+F  Y+ EK++SEQRPVFT D  G TF Y+K+NNL+L++VTK NSNVALML+YL+R+  VF++YFGELEEESIRDNFVII+EL+DET+D GYPQTTEA+ILREYITQEG+R+EAAPRPP ALTN VSWRSEGIKHRKNEIFLDV+EKLNLLV++NGTVLHSEI+GA++MKSFLSGMPELKLGLNDK++FEA GRS + S+KGKA+E+EDIKFHQCVRLARFE DRTISFIPPDGEFDLMTYRL+T VKPLIWVEAVVEPHS SRIEYMIK KSQFKSRSIANNV+I+IPVP DVD+PSFK SIG+VTY+PD+DAIVW+IKQF+G REY MRAHFGLPSI    ++TS     WK P+Q+KFEIPYFTVSGIQVRYLKIIEKSG+ ALPWVRYIT  GD  +RM
Sbjct:    1 MVLSAVFVTDLKGKIIISRNYRGDIPMSIAEKFTQYVTEKDDSEQRPVFTNDESGVTFVYIKFNNLYLMTVTKVNSNVALMLMYLNRICQVFQDYFGELEEESIRDNFVIIFELLDETIDHGYPQTTEARILREYITQEGHRMEAAPRPPTALTNAVSWRSEGIKHRKNEIFLDVVEKLNLLVASNGTVLHSEILGAVKMKSFLSGMPELKLGLNDKMLFEATGRS-TTSSKGKAVEMEDIKFHQCVRLARFETDRTISFIPPDGEFDLMTYRLNTHVKPLIWVEAVVEPHSRSRIEYMIKTKSQFKSRSIANNVEIVIPVPPDVDSPSFKCSIGSVTYVPDRDAIVWTIKQFNGSREYAMRAHFGLPSITNSNTATSDE---WKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRM 430
The following BLAST results are available for this feature:
BLAST of NO09G01380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27656.14.000e-24096.54ap-1 complex subunit mu-1-like isoform 1 [Nannochl... [more]
CBJ29677.17.900e-20482.64Clathrin assembly complex, medium subunit [Ectocar... [more]
XP_008913378.19.100e-20079.63hypothetical protein PPTG_17400 [Phytophthora para... [more]
XP_009518106.11.200e-19979.63hypothetical protein PHYSODRAFT_349597 [Phytophtho... [more]
ETP32967.14.500e-19979.40hypothetical protein F442_18448 [Phytophthora para... [more]
XP_009039824.17.700e-19978.94hypothetical protein AURANDRAFT_72236 [Aureococcus... [more]
XP_008875643.13.200e-19778.57hypothetical protein H310_10930 [Aphanomyces invad... [more]
KUF97917.11.200e-19676.79SAGA-associated factor 29 [Phytophthora nicotianae... [more]
OQR81826.12.700e-19677.88AP-1 complex subunit mu [Thraustotheca clavata][more]
OQR98282.14.700e-19677.88AP-1 complex subunit mu [Achlya hypogyna][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL119nonsL119Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR021ncniR021Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR127ngnoR127Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010627NSK010627Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO09G01380.2NO09G01380.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO09G01380.1NO09G01380.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|589035gene_4416Nannochloropsis oceanica (N. oceanica CCMP1779)gene
APM4gene2911Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO09G01380.2NO09G01380.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO09G01380.1NO09G01380.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO09G01380 ID=NO09G01380|Name=NO09G01380|organism=Nannochloropsis oceanica|type=gene|length=2132bp
ACAGGCAAGGATCACCACTCGAAACAAAGGCTAACCCACCCGCGCCTCAA
GTCTCCGCGAACACCTGCCTCCTTCTCCTTCCGGACCCCTCGGCCGCCAC
AAGGAGCCCACCATGGTGGCCTCGGCGCTTTTCATCATGGATCTCAAGGG
GAAGATCATCATCTCCCGCAACTTCAGGGGTGATATCCCCCAGACTGTCT
CGGAAAGGTAAAGCGAGTAAGGGAGGGCAGGGTTGCTGCTTCTGCTGATG
ATTACGAGGGGGCAAGCGGGGCTGTGACATCCGTAGGGACAGCAAGAGGG
CGGCTCCTGCAGCGCTTGTTTTTGCTTTGTCTTTCACGGTCCGGAGCGAG
TTTTAGAGCGCCTGTCTTATGCCTCTGCGAGCTCTCCGTGCCCTTCCAGC
TCTCATCCACCCATCCTTCTTTCTCCCCTTACTCCCCCCGTCCCTTAGAT
TCGCCATATACCTCCAAGAAAAGGAAGAATCGGAGCAACGGCCCGTCTTC
ACAGAAGACGGCTACACTTTTGCCTATCTCAAGTACAACAATCTCTTTCT
TCTGAGTGTGACCAAACGCAATTCCAACGTGGCTTTGATGCTTGTCTACC
TCTCCCGGTTGGTCGACGTGTTCAAAGAGTATTTTGGGGAGTTGGAAGAA
GAAAGCATCCGTGACAACTTTGTCATTATTTATGAGTTAATGGACGAGAC
GATGGACTTTGGCTATCCCCAGACAACGGAGGCGAAGATTCTGAGAGAGT
ACATCACTCAAGAAGGGAATAGGCTGGAAGCCGCCCCACGGCCGCCGGTG
GCGTTGACCAACACGGTGTCATGGCGCTCAGAAGGGATCAAACATCGGAA
GAACGAGATCTTCTTGGACGTCATCGAAAAATTGAACTTGTTGGTGTCAG
CGAACGGGACCGTGTTGCACTCGGAGATTGTTGGGGCGATCCGGATGAAG
TCCTTCTTGAGTGGCATGCCCGAGTTGAAGCTGGGTTTGAATGATAAGCT
GATGTTCGAGGCGGCCGGGCGGTCGGTCTCGGCCTCGACGAAAGGGAAGG
CGATCGAGCTGGAGGACATCAAGTTTCATCAATGTGTCAGGCTGGCGCGC
TTCGAGAACGATCGAACCATTTCCTTCATCCCGCCGGATGGGGAGTTTGA
CCTGATGACCTACCGCTTGTCGACGCAGGTGAAGCCCTTGATATGGGTGG
AGGCGGTAGTGGAGCCTCATTCTCACTCTAGAATCGAGTATATGATCAAG
gtgaggaagaacggaagacgaaggagggagggagggagggagggagggag
gacgtgatggtgagagtatgttaagatggatttcgtaccttgagtgtctt
tgtccacggcgcccatgacacgcaaacacacttacaccattttcttgtct
tttcctttctccaatcaatccacagGCCAAGAGTCAGTTTAAGTCCCGCT
CCATCGCCAACAACGTGGATATCATTATCCCCGTCCCCTCTGATGTGGAC
ACGCCCTCCTTCAAAGCCTCCATTGGCACCGTCACATACCTCCCCGACAA
GGACGCCATCGTCTGGAGCATCAAGCAATTCCACGGTCAACGTGAATATC
TTATGCGCGCTCATTTTGGTTTGCCTTCCATTGCCGCGGAAGGGTCCTCC
ACCAGTGCCGCGGAGAAGTGTTGGAAGAAGCCGGTGCAGATTAAATTTGA
GATTCCTTATTTTACCGTTTCGGGTATCCAGGTTCGATACTTGAAGATTA
TAGAGAAGAGCGGTTTTGCGGCTTTGCCTTGGGTGCGATATATAACTTGT
GCGGGGGATGTTTTTATGCGCATGGGGACTTGAGATGTGGGGTGGAGGGT
GGAAGGAGGAGAGGAGGGGGTGGGTGTAGGAGTAGGTGTGGGGTTGGAGG
AAATTGTGTGGAGAGGGATGTTTGGAGCGAAAGAGGACTTGGTCGAAATG
TACAACTAAGACGAACGAACGGAAGAGACAGTAACAGATGGGAAAAAAAC
GCATAATGAAGCTGGGAGGTTTTTGCGGCATTGAAGATGATTCCGTTGAG
ACCGATTGAGACGTATCCCTAGTGTGAGACGATCTCTCGCTCCAGCTCTT
ACCCCTAGAAGAAGTAAACGTTATGTGTCAAT
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protein sequence of NO09G01380.2

>NO09G01380.2-protein ID=NO09G01380.2-protein|Name=NO09G01380.2|organism=Nannochloropsis oceanica|type=polypeptide|length=430bp
MPLRALRALPALIHPSFFLPLLPPSLRFAIYLQEKEESEQRPVFTEDGYT
FAYLKYNNLFLLSVTKRNSNVALMLVYLSRLVDVFKEYFGELEEESIRDN
FVIIYELMDETMDFGYPQTTEAKILREYITQEGNRLEAAPRPPVALTNTV
SWRSEGIKHRKNEIFLDVIEKLNLLVSANGTVLHSEIVGAIRMKSFLSGM
PELKLGLNDKLMFEAAGRSVSASTKGKAIELEDIKFHQCVRLARFENDRT
ISFIPPDGEFDLMTYRLSTQVKPLIWVEAVVEPHSHSRIEYMIKAKSQFK
SRSIANNVDIIIPVPSDVDTPSFKASIGTVTYLPDKDAIVWSIKQFHGQR
EYLMRAHFGLPSIAAEGSSTSAAEKCWKKPVQIKFEIPYFTVSGIQVRYL
KIIEKSGFAALPWVRYITCAGDVFMRMGT*
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protein sequence of NO09G01380.1

>NO09G01380.1-protein ID=NO09G01380.1-protein|Name=NO09G01380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=435bp
MVASALFIMDLKGKIIISRNFRGDIPQTVSERFAIYLQEKEESEQRPVFT
EDGYTFAYLKYNNLFLLSVTKRNSNVALMLVYLSRLVDVFKEYFGELEEE
SIRDNFVIIYELMDETMDFGYPQTTEAKILREYITQEGNRLEAAPRPPVA
LTNTVSWRSEGIKHRKNEIFLDVIEKLNLLVSANGTVLHSEIVGAIRMKS
FLSGMPELKLGLNDKLMFEAAGRSVSASTKGKAIELEDIKFHQCVRLARF
ENDRTISFIPPDGEFDLMTYRLSTQVKPLIWVEAVVEPHSHSRIEYMIKA
KSQFKSRSIANNVDIIIPVPSDVDTPSFKASIGTVTYLPDKDAIVWSIKQ
FHGQREYLMRAHFGLPSIAAEGSSTSAAEKCWKKPVQIKFEIPYFTVSGI
QVRYLKIIEKSGFAALPWVRYITCAGDVFMRMGT*
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Synonyms
Publications