NO09G01200, NO09G01200 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G01200 vs. NCBI_GenBank
Match: EWM27664.1 (hypothetical protein Naga_100125g7 [Nannochloropsis gaditana]) HSP 1 Score: 839.3 bits (2167), Expect = 1.700e-239 Identity = 789/1452 (54.34%), Postives = 966/1452 (66.53%), Query Frame = 0
Query: 1 MWQRRPSVSGKYAEEAGHYSFPPPIDHAPV---VTVVDTTTSSTNRRIMPR----SPDRSVSVVGILLAFPCLVFAV--VFYSHHKNTSNSNSIQPQ---------RALDTLIAFPNLFFWNLKGTIKVGVEEEAAIVGISPGRVGEWFDALNPLTDALDMTADVEGFNAAWEGFWLRNGRTCLADSTKRLKEAVES-ACDVVLLLPGHIYHLKKMINVWRPITLIGNPAERPIINAAKAERAFWVHSKASMDIRHIMFYEGEGDVIRNEIRTRFGGVVYLSSGANLFAFDCLFTIQPTREAIFNDRPEFIFGGDLLMVGGVMNILACSFFAIVPGFVNSISTEIGGSVLILGGKATFTLVNFMTTQIFAFNAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLESDAITKFKERGYALCYKGLDGNEKEEIE---------GEGVALVVVQNLQGRQRLGGWRGWTLPDTSPALLYLGGNISSCQICGLDNVEVQGPATGACYDAEATEPAVCPADQ--SPRKTAALAGEPPVVIAPVANTIIDSSSSSNSTRDVKNKLFGLNARVRRLIAGRSENDRVRQATEXXXXXXXXXXXXXHEPDAFLPDTYVITADLVLNCSSLFSTTNESVVVATCGCGTTARELQDLLEESWLKDLGAEDDTTVVITPFKSSDSLLETLGILSING---------RSXXXXXXXXXXXXXXACTKQEIYATYLHTTDKVTFEKLKHSL-LATDSSSSTSGRSNIITLLSSRLSLLLAALYPQICHVNLTLQDSLFVPPPVKNPTSSIGTAASSDSSGNNRPSGISGGITLPRVWVNITTPVISVGNTYQVAISDFDDGDRVGLQLVASFSKDKKDKKATPSLFFQSTPRPLYTFRPFDALAGNQTWGWQTSALTFRGMGSGPFFLKAFDILEPKRFVLSQAFELEGVTATAGTVRGLNAGTRNAGTSSATLKTRAEHIVRRLSGQFSGSE-------EEXXXQDIPKLE-------------DNDDSNLNLISIMSTLLVSPNSEEAFSITRNLWKALLALPSSQKALKNPALARQLLERVPALQTAPAILALDANGEAGWKDSVQIQAAMGKAIADFMDMSLSALQXXXXXXXXXXAGALFRQNDEGVDTANQWPTKIFESLTPEEEALAKRIAQERDIASMNVLMDSQAARRFGGMTMARLQDAGVGEDIKEMLGSTDIFRDLIDDPELWKAL 1393
MW+RR S S ++ P D P +T + +S NR + R + +R ++++ L+ F V + Y N + + Q Q R L +L +PNLFFWN+K + + A ++P RV FD L+PL+DA+ +TADVE F+ AWEGFWLRNG+TCLA T+RL EAV S ACDVV+L+ GH+Y+L +M++V++P T+IGNPA+RP+INAA+AERAF VHS A+ D+RHI+FYEG+GD+IRNEIRTRFGG +Y+S G LFAFDCLFTIQP RE+ N PEFIFGGD+LM GGVM ++ CSFFA+VPGF+NS+STE+GG+VLIL G AT TLVNFMTTQIFA+NAG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T ES ++E+GY LC+KG DG+E+ + E G V +VV+ L Q+LGGW G T T P ++Y+G NI+SC +CGL+NVEV+GP C TE A CPA+ S +T+AL EP A VA S SS + K FGL +R+R+LI G E+D +R ++PDA LPD+YV+ ADL+L C + + V GCG LQ+++E SWLK G ED+ V + FKSSDSL E LGI S++G +C E + Y HT+DK T+E LK SL AT+S++ SG + LS+ L+LLL++ P IC VN TLQDS VP P+ SS T +SS ++ +NR G+TLPRVW+NIT+PVI+ TY + IS+FDD D VGLQL+A SKDKK SLFF STPR L+TF+PFD+ NQTW W+ S L F+GM SGP+FLKAFD+LEPKRFVLSQAF++E A G G +S+ +AE I+ RL Q S ++ E ++ P LE D D S+ +L+S+M+TLL P E S+ LWKALLA P+SQ AL + LAR+LLER P LQTAP+++ALDA+ AGW+D Q+QAA+GKAIADF+D+S+S L+ D D + WP +I LTPEEEALA R+ ++ D+ +M LMD+QAA RFGGMTMARL+ +G++ K L S +IFRDLIDDPE+W+ L
Sbjct: 1 MWRRRASTSDTVSKAGS-----PSDDGGPKHDDITRQAMSPASLNRYLCQRGLSGTQNRKMALLKGLMPMVASTFLVFILLYCRRANPATLSPAQGQQQKASPSIFRTLQSLSMYPNLFFWNMKQAAEEVALQGALTFNVAPARVDSLFDNLDPLSDAMGVTADVEIFDDAWEGFWLRNGKTCLAHDTRRLMEAVNSTACDVVVLVAGHVYNLDRMMHVYKPTTVIGNPADRPVINAAEAERAFLVHSGATFDVRHILFYEGDGDLIRNEIRTRFGGAIYMSIGTRLFAFDCLFTIQPVRESFINSAPEFIFGGDILMEGGVMTLVGCSFFAVVPGFINSVSTELGGAVLILSGAATLTLVNFMTTQIFAYNAGGGMHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLREGTFSFVVGGRKCEVTTEESTGSFNYREKGYGLCFKGFDGSERSDPEGSVALGIDDGNVVPTLVVEKLHAHQQLGGWHGLTPLYTPPQVMYVGSNITSCALCGLENVEVRGPGMEGC--PAGTEEA-CPAESPVSSGRTSALM-EPATAAADVA------SGSSATPFKKARKFFGLGSRLRKLITGEKEDDPIRST-----GTDEIKSSHHYDPDALLPDSYVVIADLMLECQT------DGV---EAGCGILLETLQEIVESSWLK--GLEDEARVHVAKFKSSDSLREMLGIPSMDGVAAPSSTDTNIPQSKRSSSGNLSEPSCNGHEAFVAYAHTSDKSTYESLKASLSSATESATIGSGSG---STLSADLALLLSSQQPTICTVNFTLQDSFMVPAPLAK-FSSTSTGSSSSATASNRAKTAFQGLTLPRVWINITSPVITPRKTYDIVISEFDDKDIVGLQLMAKPSKDKK-----KSLFFSSTPRLLHTFQPFDSDKHNQTWAWRVSPLVFQGMASGPYFLKAFDVLEPKRFVLSQAFQVERSAAEPRQGAG-------KGAASSLFPMKAERILHRLDPQNSPTDAHLREDPEPKTDRETPVLESDSRQNHRPRQLLDEDSSDRDLLSMMATLLALP---EDTSLMDELWKALLAFPASQTALADEGLARKLLERAPVLQTAPSVVALDADDGAGWRDPGQVQAALGKAIADFVDLSVSVLRQQRGRGDGPKGMGKADVFDGREDPNDHWPARILGGLTPEEEALAARVGRDGDLEAMGELMDTQAAHRFGGMTMARLKAMELGDEFKGGLAS-EIFRDLIDDPEIWQEL 1401
BLAST of NO09G01200 vs. NCBI_GenBank
Match: EWM25479.1 (hypothetical protein Naga_100207g1 [Nannochloropsis gaditana]) HSP 1 Score: 84.3 bits (207), Expect = 3.200e-12 Identity = 57/203 (28.08%), Postives = 95/203 (46.80%), Query Frame = 0
Query: 159 LRNGRTCLADSTKRLKEAVE--SACDVVLLLPGHIYHL-----KKMINVWRPITLIGNPAERPIINAAKAERAFWVHSKASMDIRHIMFYEGEGDVIRNEIRTRFGGVVYLSSGANLFAFDCLFTIQPT--REAIF----NDRPEFIFGGDLLMVGGVMNILACSFFAIVPGFVNSISTEIGGSVLILGGKATFTLVNFMTTQ 349
L +G C+ S L++ E S C ++ LLPG IY++ I + +IGNP P I+ A ++R F + + ++D++ + Y G G++I I GG + G AF +FT P AI R +FGG + + GG++ I F+ + PG + +G +L++ G A + V F +Q
Sbjct: 146 LISGSACVPQSGMELRQMAEDPSRCAIISLLPGKIYNVALPDSDDDITISTRKVIIGNPISLPTIDGADSKRIFHIVAGGNLDLQFVRTYRGGGELIAT-IPVLRGGTALVELGGRFSAFGVIFTNAPPVGMPAILIAPDVSRAVRVFGGQVFVTGGIVTITLSHFWVLQPGVLFREIYVVGADLLVVAGVAVLSGVTFTNSQ 347
BLAST of NO09G01200 vs. NCBI_GenBank
Match: EWM22289.1 (Pectin lyase fold/virulence factor [Nannochloropsis gaditana]) HSP 1 Score: 70.1 bits (170), Expect = 6.200e-8 Identity = 49/198 (24.75%), Postives = 85/198 (42.93%), Query Frame = 0
Query: 165 CLADSTKRLKEAVE-SACDVVLLLPGHIYHLKKMINVWRPITLIGNPAERPIINAAKAERAFWVHSKASMDIRHIMFYEGE-GDVIRNEIRTRFGGVVYLSSGANLFAFDCLFTIQPTREAIF-----NDRPEFIFGGDLLMVGGVMNILACSFFAIVPGFVNSISTEIGGSVLILGGKATFTLVNFMTTQIFAFNAG 356
C + + L+ ++ + C + L+P Y + + + + R +TL+G P PII+A RAF V + +D+R + +G+ +V+ + G Y+ G C F+ A+F +FGG ++ G + + C F G +GG L+LGG T F+ IFA + G
Sbjct: 9 CTPKNAEELRYMIDHTTCPRLTLVPATNYSITEQLVIRRRVTLVGRPLGLPIIDAHNTTRAFLVEAGGFLDVRFVEIVKGKFVEVVPLVLYRLRGPTCYIRRGGVALFTGCRFSANWRNAALFLGITPPQTNVQVFGGGIVAESGTLRVTDCHVFRPRIGIAFREIQFVGGEFLVLGGNMYLTGCIFVNMAIFASSLG 206 The following BLAST results are available for this feature:
BLAST of NO09G01200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 3
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G01200 ID=NO09G01200|Name=NO09G01200|organism=Nannochloropsis oceanica|type=gene|length=4907bpback to top protein sequence of NO09G01200.1 >NO09G01200.1-protein ID=NO09G01200.1-protein|Name=NO09G01200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1393bpback to top Synonyms
Publications
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