NO09G00450, NO09G00450 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO09G00450 vs. NCBI_GenBank
Match: AET85054.1 (VCP1 [Nannochloropsis sp. W2J3B]) HSP 1 Score: 368.6 bits (945), Expect = 1.300e-98 Identity = 183/209 (87.56%), Postives = 195/209 (93.30%), Query Frame = 0 Query: 1 MKTAALLTVSTLMGAQAFMAPAPKFSRTRGVARMSFEDEAGVTGPLGYWDPLGLSADGDVEKFNKYRAAEIKHGRVAMLAMLHTLVTGLGVKLPGLVAAGDGIPQSMPYGIGAVTSGAWAAQGWAQVLLFAAALEVLAPQKEDKIPGDVQPDTSAFAKLDEKSEEEALAYQNKELNNGRLAMVSWLGAVVGASLTGGEDPVATLLHKLG 210 MKTAALLTVSTLMGAQAFMAPAPKFSRTRGVARMSFE+EAGVT PLGYWDPLGLSADGDV+KFN+YRA EIKHGRVAMLAMLHTL+TG GV LPGLV AGDGIPQSMPYGIGA+TSGAWAAQGWAQVL+F +ALEVLAPQKEDKIPGDVQPDTSAFAKLD+K+EEEAL YQN E+NNGRLAMV+W GA VGA LT GE PV TLL+KLG Sbjct: 1 MKTAALLTVSTLMGAQAFMAPAPKFSRTRGVARMSFENEAGVTAPLGYWDPLGLSADGDVDKFNRYRAIEIKHGRVAMLAMLHTLITGAGVTLPGLVTAGDGIPQSMPYGIGAITSGAWAAQGWAQVLIFCSALEVLAPQKEDKIPGDVQPDTSAFAKLDDKTEEEALKYQNTEINNGRLAMVAWTGATVGALLTNGEHPVTTLLNKLG 209
BLAST of NO09G00450 vs. NCBI_GenBank
Match: EWM21572.1 (light-harvesting protein [Nannochloropsis gaditana]) HSP 1 Score: 367.5 bits (942), Expect = 2.800e-98 Identity = 184/210 (87.62%), Postives = 195/210 (92.86%), Query Frame = 0 Query: 1 MKTAALLTVSTLMGAQAFMAPAPKFSRTRGVARMSFEDEAGVTGPLGYWDPLGLSADGDVEKFNKYRAAEIKHGRVAMLAMLHTLVTGLGVKLPGLVAAGDGIPQSMPYGIGAVTSGAWAAQGWAQVLLFAAALEVLAPQKEDKIPGDVQPDTSAFAKLDEKSEEEALAYQNKELNNGRLAMVSWLGAVVGASLTGGEDPVATLLHKLGN 211 MKTAALLTVS+LMGA AF+APAPKFSRTRGVARMSFE EAGVT PLGYWDPLG SADGDVEKFN+YRA EIKHGRVAMLAMLHTLVTGLGVKLPGLVAAGDGIP SMP GI A+TSGAWAAQGWAQVLLF +ALEVLAPQKEDKIPGDVQPDTSAFAKL++K+EEEALAYQNKE+NNGRLAMV+W GA VGA LT GEDP+ TLL KLGN Sbjct: 1 MKTAALLTVSSLMGASAFVAPAPKFSRTRGVARMSFEGEAGVTAPLGYWDPLGFSADGDVEKFNRYRAIEIKHGRVAMLAMLHTLVTGLGVKLPGLVAAGDGIPASMPAGINAITSGAWAAQGWAQVLLFCSALEVLAPQKEDKIPGDVQPDTSAFAKLEDKTEEEALAYQNKEINNGRLAMVAWTGATVGALLTNGEDPITTLLAKLGN 210
BLAST of NO09G00450 vs. NCBI_GenBank
Match: AAB94637.1 (violaxanthin/chlorophyll a binding protein precursor [Nannochloropsis sp.]) HSP 1 Score: 344.7 bits (883), Expect = 2.000e-91 Identity = 177/209 (84.69%), Postives = 189/209 (90.43%), Query Frame = 0 Query: 1 MKTAALLTVSTLMGAQAFMAPAPKFSRTRGVARMSFEDEAGVTGPLGYWDPLGLSADGDVEKFNKYRAAEIKHGRVAMLAMLHTLVTGLGVKLPGLVAAGDGIPQSMPYGIGAVTSGAWAAQGWAQVLLFAAALEVLAPQKEDKIPGDVQPDTSAFAKLDEKSEEEALAYQNKELNNGRLAMVSWLGAVVGASLTGGEDPVATLLHKLG 210 MKTAALLTVSTLMGAQAFMAPAPKFSRTRGVARMSFE+EAGVT PLGYWDPLGLSADGDV+KFN+YRA EIKHGRVAMLAMLHTL+TG GV LPGLV AGDGIPQSMP + A SGAW AQGWAQVL+F +ALEVLAPQKEDKIPGDVQPDTSAFAKLD+K+EEEAL YQN E+NNGRLAMV+W GA VGA LT GE PV TLL+KLG Sbjct: 1 MKTAALLTVSTLMGAQAFMAPAPKFSRTRGVARMSFENEAGVTAPLGYWDPLGLSADGDVDKFNRYRAIEIKHGRVAMLAMLHTLITGAGVTLPGLVTAGDGIPQSMPTAL-APYSGAW-AQGWAQVLIFCSALEVLAPQKEDKIPGDVQPDTSAFAKLDDKTEEEALKYQNTEINNGRLAMVAWTGATVGALLTNGEHPVTTLLNKLG 207
BLAST of NO09G00450 vs. NCBI_GenBank
Match: XP_005852336.1 (protein fucoxanthin chlorophyll a c protein [Nannochloropsis gaditana CCMP526] >EKU23491.1 protein fucoxanthin chlorophyll a c protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 123.6 bits (309), Expect = 7.100e-25 Identity = 57/63 (90.48%), Postives = 59/63 (93.65%), Query Frame = 0 Query: 13 MGAQAFMAPAPKFSRTRGVARMSFEDEAGVTGPLGYWDPLGLSADGDVEKFNKYRAAEIKHGR 76 MGA AF+APAPKFSRTRGVARMSFEDEAGVT PLGYWDPLG SADGDVEKFN+YRA EIKHGR Sbjct: 1 MGASAFVAPAPKFSRTRGVARMSFEDEAGVTAPLGYWDPLGFSADGDVEKFNRYRAIEIKHGR 63
BLAST of NO09G00450 vs. NCBI_GenBank
Match: CAA68028.1 (fucoxanthin chlorophyll a /c binding protein [Heterosigma akashiwo]) HSP 1 Score: 115.9 bits (289), Expect = 1.500e-22 Identity = 81/207 (39.13%), Postives = 116/207 (56.04%), Query Frame = 0 Query: 1 MKTAALLTVSTLMGAQAFMAPAPK-FSRTRGVARMSFEDEAGVTGPLGYWDPLGLSADGDVEKFNKYRAAEIKHGRVAMLAMLHTLVTGLGVKLPGLV-AAGDGIPQSMPYGIGAVTSGAWAAQGWAQVLLFAAALEVLAPQKEDKIPGDVQPDTSAFAKLDEKSEEEALAYQNKELNNGRLAMVSWLGAVVGASLTGGEDPVATLL 206 +K A L + LMGA AF+AP +++ +MSFE+E GV PLG+WDPLGL + D E+F++ R EIKHGR++MLA+L LVT GV+LPG AGD S+P G+ A++ A A G AQ + F +E+ Q ++++ D + A DEK + + ELNNGR A + L +V L + +LL Sbjct: 3 LKLATL--AAALMGASAFVAPNKMGVAKSSSALKMSFENEIGVQAPLGFWDPLGLLDEADQERFDRLRTVEIKHGRISMLAILGHLVTTAGVRLPGAYDLAGDQF-SSLPTGLKALS--ALPAAGVAQTIGFIGLIELGFAQIKEELEADCEARMDAAGWDDEKKDSKRAI----ELNNGRAAQMGILALMVHEQLDNNPYIINSLL 200
BLAST of NO09G00450 vs. NCBI_GenBank
Match: OLQ00217.1 (Fucoxanthin-chlorophyll a-c binding protein F, chloroplastic [Symbiodinium microadriaticum]) HSP 1 Score: 108.6 bits (270), Expect = 2.400e-20 Identity = 67/172 (38.95%), Postives = 94/172 (54.65%), Query Frame = 0 Query: 26 SRTRGVARMSFEDEAGVTGPLGYWDPLGLSADGDVEKFNKYRAAEIKHGRVAMLAMLHTLVTGLGVKLPGLVAAGDGIPQS-MPYGIGAVTSGAWAAQGWAQVLLFAAALEVLAPQKEDKIPGDVQPDTSAFAKLDEKSEEEALAYQNKELNNGRLAMVSWLGAVVGASLTG 197 ++ + AR +FE E GV P+G+WDPLGL+ DGDVE F + R+ E+KHGR+AMLA + + + K PG + G+ S +P G+ A++ A GW Q+LL+ A EV D G +P + L EE N EL NGRLAM++ +G LTG Sbjct: 149 AKAQVTARRAFESELGVQAPVGFWDPLGLARDGDVEAFQRRRSVELKHGRIAMLATMGYITPEIAGKWPGYLDPAGGLKFSDIPNGLAAISK--VPAGGWTQILLWMAWCEVSRGAGSDIASG--RPGDFGWYVLTAADPEEKKKKLNAELANGRLAMMAIIGMFYQDGLTG 316
BLAST of NO09G00450 vs. NCBI_GenBank
Match: XP_002177871.1 (protein fucoxanthin chlorophyll a/c protein [Phaeodactylum tricornutum CCAP 1055/1] >CAA38990.1 fucoxanthin, chlorophyll protein 1 [Phaeodactylum tricornutum] >EEC50685.1 protein fucoxanthin chlorophyll a/c protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 108.2 bits (269), Expect = 3.100e-20 Identity = 73/186 (39.25%), Postives = 102/186 (54.84%), Query Frame = 0 Query: 12 LMGAQAFMAPAPKFSRTRGVARMSFEDEAGVTGPLGYWDPLGLSADGDVEKFNKYRAAEIKHGRVAMLAMLHTLVTGLGVKLPGLVAAGDGIPQSMPYGIGAVTSGAWAAQGWAQVLLFAAALEVLAPQKE---DKIPGDVQPDTSAFAKLDEKSEEEALAYQNKELNNGRLAMVSWLGAVVGASL 195 L+ + A APA + +RT M+FE+E G PLGYWDPLGL ADGD EKF++ R EIKHGR+ MLA+ L G++LPG + +S+P G A++ A G AQ++ F LE+ A K+ + GD + + F D SE++ L + ELN GR A + L +V L Sbjct: 9 LLASAAAFAPAQQSARTSVATNMAFENEIGAQQPLGYWDPLGLVADGDQEKFDRLRYVEIKHGRICMLAVAGYLTQEAGIRLPGDIDYSGTSFESIPNGFAALS--AVPGAGIAQIIAFIGFLEI-AVMKDITGGEFVGDFRNNYLDFG-WDTFSEDKKLQKRAIELNQGRAAQMGILALMVHEQL 190
BLAST of NO09G00450 vs. NCBI_GenBank
Match: AAG13004.1 (light harvesting protein lhcf3, partial [Saccharina latissima]) HSP 1 Score: 108.2 bits (269), Expect = 3.100e-20 Identity = 70/185 (37.84%), Postives = 101/185 (54.59%), Query Frame = 0 Query: 26 SRTRGVARMSFEDEAGVTGPLGYWDPLGLSADGDVEKFNKYRAAEIKHGRVAMLAMLHTLVTGLGVKLPGLVA-AGDGIPQSMPYGIGAVTSGAWAAQGWAQVLLFAAALEV-LAPQKEDKIPGDVQPDTSAFAKLDEKSEEEALAYQNKELNNGRLAMVSWLGAVVGASLTGGEDPVATLLHKL 209 ++T +MSFE+E GV PLGYWDPL + D E+F++ R EIKHGR+ MLA+L +V V+LPG+++ + D MP G+GA++ G AQ+++F LEV + QKE PGD+ + D EE L + ELNNGR A + G +V + + LL +L Sbjct: 11 AKTSSAMKMSFENELGVQAPLGYWDPLYWLENADQERFDRLRYVEIKHGRICMLAILGHIVQE-NVRLPGMLSFSNDQSFADMPNGLGALSK--MGPIGVAQIVIFIGFLEVFVMKQKEGSFPGDMSRVNPFEKQWDSFDEETKLRKRAIELNNGRAAQMGIFGLIVHEVINNQPYVINNLLGEL 192
BLAST of NO09G00450 vs. NCBI_GenBank
Match: BAK42595.1 (fucoxanthin chlorophyll a/c protein [Fistulifera solaris] >GAX12162.1 hypothetical protein FisN_1Hh087 [Fistulifera solaris]) HSP 1 Score: 107.8 bits (268), Expect = 4.100e-20 Identity = 75/192 (39.06%), Postives = 108/192 (56.25%), Query Frame = 0 Query: 1 MKTAALLTVSTLMGAQAFMAPAPKFSRTRGVARMSFEDEAGVTGPLGYWDPLGLSADGDVEKFNKYRAAEIKHGRVAMLAMLHTLVTGLGVKLPGLVAAGDGIPQSMPYGIGAVTSGAWAAQGWAQVLLFAAALE--VLAPQKEDKIPGDVQPDTSAFAKLDEKSEEEALAYQNKELNNGRLAMVSWLGAVV 191 MK A L ++L+ + A APA K + T + +FE+E GV PLG+WDPLGL ADGD +F++ R EIKHGR+ MLA+ L T G++LPGL++ +P G A++ A A G Q+L F LE V+ + + PGD + + F D S+++ L + ELNNGR A + L +V Sbjct: 1 MKFAVL---ASLLASAAAFAPAQKTASTTSL--KAFENEVGVQQPLGFWDPLGLVADGDQARFDRLRFVEIKHGRICMLAVAGYLTTEAGIRLPGLISYDGTSFADIPSGFDALS--AVPAAGITQILAFIGFLEIAVMRDRVGGEFPGDFRNNFIDFG-WDTFSDQKKLEKRAIELNNGRAAQMGILALMV 184
BLAST of NO09G00450 vs. NCBI_GenBank
Match: ACE80197.1 (chloroplast light harvesting protein lhcf5 [Saccharina japonica]) HSP 1 Score: 107.5 bits (267), Expect = 5.300e-20 Identity = 75/201 (37.31%), Postives = 106/201 (52.74%), Query Frame = 0 Query: 4 AALLTVSTLMGAQAFMAPA-------PKFSRTRGVARMSFEDEAGVTGPLGYWDPLGLSADGDVEKFNKYRAAEIKHGRVAMLAMLHTLVTGLGVKLPGLVAAGDGIP-QSMPYGIGAVTSGAWAAQGWAQVLLFAAALEVLAPQK-EDKIPGDVQPDTSAFA-KLDEKSEEEALAYQNKELNNGRLAMVSWLGAVVGASL 195 +A++ V+ GAQAF+AP+ ++ +MSFE E G PLG+WDPLGL AD D E+F + R E+KHGR+AMLA+ L T +LPG+++ + MP G+ A++ A G AQ+ F LE+ + E PGD + FA D SEE + + ELNNGR A + L +V L Sbjct: 3 SAVMAVACAAGAQAFVAPSAFNGAALTTSAKASSAMKMSFESEIGAQAPLGFWDPLGLLADADQERFERLRYVEVKHGRIAMLAIAGHL-TQQNTRLPGMLSNSANLSFADMPNGVAALSKIPPA--GLAQIFAFVGFLELAVMKNVEGSFPGDFTNGGNPFASSWDNMSEETQASKRAIELNNGRAAQMGILALMVHEEL 200 The following BLAST results are available for this feature:
BLAST of NO09G00450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO09G00450 ID=NO09G00450|Name=NO09G00450|organism=Nannochloropsis oceanica|type=gene|length=2480bpback to top protein sequence of NO09G00450.1 >NO09G00450.1-protein ID=NO09G00450.1-protein|Name=NO09G00450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=211bpback to top Synonyms
Publications
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