NO08G04340, NO08G04340 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G04340 vs. NCBI_GenBank
Match: EWM26895.1 (nad h dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 434.1 bits (1115), Expect = 3.000e-118 Identity = 196/252 (77.78%), Postives = 223/252 (88.49%), Query Frame = 0 Query: 1 MPRANKVLSLFLWDPFSRYIASVANRWTSLIPPPPRHPSDAPRRVLLIHAHPLGAASFNGACFTTAHHGLQEAGHEVKTLKLYEDKFQPLMQPSDIKEYFKPLAERDEADAPDKAALLRYVALLKWCDSLIFVYPTWWYAMPAILKGWIERTFLPHSTWTLPSPSSPPASVVGLVPCLENIKKVGVITTYGSTWGVIRYVGDPGRRIIARGLRPLFSRECTVLWLGLYNCDTATQKAREGFLAEVEAYMREF 253 MPR NK LSLFLWDP SR++AS ANRWTS IPPPPRHPSD PRRVLL+HAHP+G +SFNGACF T H LQEAGHEV+TL LYE+ FQP MQ SDI+EY KPL++R + PDKAALLRY+ LLKWCD+LIFVYPTWWYAMPAILKGWI+RTFLPHS +TLP+P+SPPASVVGLVPCL+NIKKVGV+TTYGS++ VIRYVGDPGRRIIARGLRPLF +CT+LWLG+Y+CDTA+Q RE FLAEV +YMREF Sbjct: 1 MPRGNKELSLFLWDPLSRFLASAANRWTSFIPPPPRHPSDPPRRVLLLHAHPMGTSSFNGACFETTHRSLQEAGHEVQTLSLYEEGFQPCMQASDIREYMKPLSDRHDEGTPDKAALLRYIDLLKWCDALIFVYPTWWYAMPAILKGWIDRTFLPHSAFTLPTPTSPPASVVGLVPCLKNIKKVGVVTTYGSSYQVIRYVGDPGRRIIARGLRPLFDAQCTLLWLGMYSCDTASQAEREDFLAEVNSYMREF 252
BLAST of NO08G04340 vs. NCBI_GenBank
Match: XP_005855753.1 (nad h dehydrogenase, partial [Nannochloropsis gaditana CCMP526] >EKU20608.1 nad h dehydrogenase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 239.6 bits (610), Expect = 1.100e-59 Identity = 107/141 (75.89%), Postives = 120/141 (85.11%), Query Frame = 0 Query: 1 MPRANKVLSLFLWDPFSRYIASVANRWTSLIPPPPRHPSDAPRRVLLIHAHPLGAASFNGACFTTAHHGLQEAGHEVKTLKLYEDKFQPLMQPSDIKEYFKPLAERDEADAPDKAALLRYVALLKWCDSLIFVYPTWWYAM 142 MPR NK LSLFLWDP SR++AS ANRWTS IPPPPRHPSD PRRVLL+HAHP+G +SFNGACF T H LQEAGHEV+TL LYE+ FQP MQ SDI+EY KPL++R + PDKAALLRY+ LLKWCD+LIFVYPTWWYAM Sbjct: 6 MPRGNKELSLFLWDPLSRFLASAANRWTSFIPPPPRHPSDPPRRVLLLHAHPMGTSSFNGACFETTHRSLQEAGHEVQTLSLYEEGFQPCMQASDIREYMKPLSDRHDEGTPDKAALLRYIDLLKWCDALIFVYPTWWYAM 146
BLAST of NO08G04340 vs. NCBI_GenBank
Match: CBJ32295.1 (NAD(P)H dehydrogenase (quinone) [Ectocarpus siliculosus]) HSP 1 Score: 189.5 bits (480), Expect = 1.300e-44 Identity = 93/229 (40.61%), Postives = 137/229 (59.83%), Query Frame = 0 Query: 25 NRWTSLIPPPPRHPSDAPRRVLLIHAHPLGA-ASFNGACFTTAHHGLQEAGHEVKTLKLYEDKFQPLMQPSDIKEYFKPLAERDEADAPDKAALLRYVALLKWCDSLIFVYPTWWYAMPAILKGWIERTFLPHSTWTLPSPSSPPASVVGLVPCLENIKKVGVITTYGSTWGVIRYVGDPGRRIIARGLRPLFSRECTVLWLGLYNCDTATQKAREGFLAEVEAYMREF 253 NR TS +PPPP +++++ HP G SF A L++AGH+V+ LY+++FQ + + + + A RD A D + +V L+WC L+ YPTWWY+ PAILKGW++RT +P + LP+ P G + L NI+KVG++TT+G+++ +RYVGDPGRRI++RGLRPLF ECT+LW GLY+ + + R FL +V R+F Sbjct: 26 NRVTSFVPPPPSGKDGVQEKIVVVQVHPNGKDPSFTLALGEAVRDSLKDAGHQVRVTNLYQEQFQAALGGQEHRGFM--TAFRDGQVAED---VKGHVDDLQWCSGLVLCYPTWWYSFPAILKGWLDRTLMPGVAFDLPNGVEKPHPKTGFISRLTNIRKVGMVTTFGNSFWNVRYVGDPGRRIVSRGLRPLFHPECTLLWKGLYDVEKCPPQDRSAFLEDVGRSFRDF 249
BLAST of NO08G04340 vs. NCBI_GenBank
Match: OEU21868.1 (flavo protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 174.9 bits (442), Expect = 3.200e-40 Identity = 90/229 (39.30%), Postives = 134/229 (58.52%), Query Frame = 0 Query: 25 NRWTSLIPPPPRHPSDAPRRVLLIHAHPLGAASFNGACFTTAHHGLQEAGHEVKTLKLYEDKFQPLMQPSDIKEYFKPLAERDEADAPDKAALLRYVALLKWCDSLIFVYPTWWYAMPAILKGWIERTFLPHSTWTLPSPSSPPASV--VGLVPCLENIKKVGVITTYGSTWGVIRYVGDPGRRIIARGLRPLFSRECTVLWLGLYNCDTATQKAREGFLAEVEAYMRE 252 N++ S +PPPP APR++L++ +HP+ S++ A T +E GHEV+ + L +KF P++ + YF +D+ + P + Y+ LKWCD+L FVYPTWW P LKG+++RT +PH W P + S VGL P L NI++V I+TYG T + GD GRR+I+ + P+FS +CT+ W GLY+ D T + R FL EV+A ++E Sbjct: 21 NQFLSYVPPPPPKNQGAPRKILIVSSHPV-PESYSLAIARTVEETAKEQGHEVQRIDLGLEKFDPVLNKKERLAYFDD-TNKDDKNLPKD--VRGYIQKLKWCDTLFFVYPTWWMNTPGALKGFLDRTLVPHHCWHFPKEETGIKSYLPVGLAPGLLNIEQVYGISTYGCTRPIATLAGDNGRRMISNAILPIFSNDCTIRWHGLYSMDFQTDENRRIFLDEVKAMVKE 245
BLAST of NO08G04340 vs. NCBI_GenBank
Match: XP_005781686.1 (NAD(P)H dehydrogenase [Emiliania huxleyi CCMP1516] >EOD29257.1 NAD(P)H dehydrogenase [Emiliania huxleyi CCMP1516]) HSP 1 Score: 170.2 bits (430), Expect = 8.000e-39 Identity = 92/252 (36.51%), Postives = 142/252 (56.35%), Query Frame = 0 Query: 12 LWDPFSRYIASVANRWTSLIPPPPRHPSDA-PRRVLLIHAHPLGAASFNGACFTTAHHGLQEAGHEVKTLKLYEDKFQPLMQPSDIKEYFKPLAERDEADAPDKAA--LLRYVALLKWCDSLIFVYPTWWYAMPAILKGWIERTFLP------HSTWTLPSPSSPPASVV---GLVPCLENIKKVGVITTYGSTWGVIRYVGDPGRRIIARGLRPLFSRECTVLWLGLYNCDTATQKAREGFLAEVEAYMRE 252 LW+P +R++A N T+ +PPPPR P D R++LL+HAHP S++ A G +E GH ++ LY+++F P+M ++ Y RD P + A + ++ L+W DS++FVYPTWW+ +PA+LKG+I+R +P W P + + + GLV L N+K+V I+TYGS + GD GR +I G+R LF CTVLW+GLY+ D + + R F+ +V +R+ Sbjct: 2 LWNPATRWLAKNLNWVTTQVPPPPRSPDDVEKRKILLVHAHP-RTDSYSHALADAVEAGAKEGGHTIRRRDLYKERFSPVMTAAERGAYL-----RDFDMVPKRLASDVRSHLDDLRWADSVVFVYPTWWFNVPAMLKGYIDRVMVPATPGSGQGAWAFPDSNIQGKASIGSGGLVGHLTNVKRVAGISTYGSERYMGLLAGDNGRNMIGTGVRALFDPSCTVLWMGLYSLDFCSDEQRADFIDKVRETIRD 247
BLAST of NO08G04340 vs. NCBI_GenBank
Match: WP_073013676.1 (flavodoxin family protein [Labrenzia suaedae] >SHM47139.1 Putative NADPH-quinone reductase (modulator of drug activity B) [Labrenzia suaedae]) HSP 1 Score: 162.9 bits (411), Expect = 1.300e-36 Identity = 79/199 (39.70%), Postives = 122/199 (61.31%), Query Frame = 0 Query: 44 RVLLIHAHPLGAASFNGACFTTAHHGLQEAGHEVKTLKLYEDKFQPLMQPSDIKEYFKPLAERDEADAPDKAALLRYVALLKWCDSLIFVYPTWWYAMPAILKGWIERTFLPHSTWTLPSPSSPPASVVGLVPCLENIKKVGVITTYGSTWGVIRYVGDPGRRIIARGLRPLFSRECTVLWLGLYNCDTATQKAREGFL 243 + L+I+ HP A SFN A L++AGHEV+ LYE+ F+P M + + Y DE D + + YVA + WCD L+FVYPTWW+ +PA+LKGW +R ++PH T+ +P+ G+ P +++I+K+ V+TT G++W V ++VG+PGR+ I RG+R L + C L+L Y DT+T ++R +L Sbjct: 2 KALVIYCHPC-AESFNAAIRNKVTSTLEKAGHEVRLRDLYEEGFEPAMGADERRRY------HDEGD--NVVPVESYVADICWCDMLVFVYPTWWFGLPAMLKGWFDRVWVPHVTFGMPTEDK------GMRPLMQHIRKIAVVTTCGASWAVSKWVGEPGRKTIMRGMRALCAPGCKTLYLAHYKMDTSTPESRSRYL 185
BLAST of NO08G04340 vs. NCBI_GenBank
Match: WP_013651547.1 (flavodoxin family protein [Polymorphum gilvum] >ADZ69227.1 NAD(P)H dehydrogenase (Quinone) [Polymorphum gilvum SL003B-26A1]) HSP 1 Score: 161.8 bits (408), Expect = 2.800e-36 Identity = 75/209 (35.89%), Postives = 125/209 (59.81%), Query Frame = 0 Query: 44 RVLLIHAHPLGAASFNGACFTTAHHGLQEAGHEVKTLKLYEDKFQPLMQPSDIKEYFKPLAERDEADAPDKAALLRYVALLKWCDSLIFVYPTWWYAMPAILKGWIERTFLPHSTWTLPSPSSPPASVVGLVPCLENIKKVGVITTYGSTWGVIRYVGDPGRRIIARGLRPLFSRECTVLWLGLYNCDTATQKAREGFLAEVEAYMREF 253 R L+++ HP A SFN A T L+ AGHE++ + LY + FQP M + + Y + + +V + WC+ L+FVYPTWW+ +PA+LKGW++R ++PH T+ +P+ +S G+ P +++I+K+ V+TT G++W V + +G+PGRR + RG+R L + C L+L Y D++T ++R +LA V ++ F Sbjct: 2 RALVVYCHPC-AESFNAAVLRTVLASLEAAGHEIRLVDLYAEGFQPAMNAEERRGY--------HDHGSNVEPVRTHVENILWCEMLVFVYPTWWFGLPAMLKGWLDRVWVPHVTFEMPTEAS------GMRPRMQHIRKIAVVTTCGASWWVSKLIGEPGRRTLLRGMRALCAPRCRTLYLAHYKMDSSTSESRSCYLAMVTRRLKRF 195
BLAST of NO08G04340 vs. NCBI_GenBank
Match: WP_058898724.1 (flavodoxin family protein [Pannonibacter phragmitetus] >ALV27178.1 NAD(P)H dehydrogenase [Pannonibacter phragmitetus]) HSP 1 Score: 159.8 bits (403), Expect = 1.100e-35 Identity = 76/209 (36.36%), Postives = 129/209 (61.72%), Query Frame = 0 Query: 44 RVLLIHAHPLGAASFNGACFTTAHHGLQEAGHEVKTLKLYEDKFQPLMQPSDIKEYFKPLAERDEADAPDKAALLRYVALLKWCDSLIFVYPTWWYAMPAILKGWIERTFLPHSTWTLPSPSSPPASVVGLVPCLENIKKVGVITTYGSTWGVIRYVGDPGRRIIARGLRPLFSRECTVLWLGLYNCDTATQKAREGFLAEVEAYMREF 253 + L++++HP+ SFN + LQ+AGHEV+ + LY + FQP M + + Y + D P KA +V + WCD ++FVYPTWW+ +PA+LKGW +R ++PH T+ +PS + G+ P +++I+K+ ++TT G++W V + +G+PGR+ I RGLR L + C L+L Y D++TQ++R+ ++ +V + +F Sbjct: 2 KALVVYSHPV-PESFNASMRDHVVSVLQQAGHEVRLIDLYAEGFQPAMSADERRGYH----DVDSNVLPVKA----HVEAILWCDMMVFVYPTWWFGLPAMLKGWFDRVWVPHVTFEMPSEHT------GMRPKMQHIRKIAIVTTCGASWFVSKLMGEPGRKTIMRGLRALCAPRCKTLYLAHYRMDSSTQESRDRYVKKVARRLAKF 195
BLAST of NO08G04340 vs. NCBI_GenBank
Match: WP_029076764.1 (flavodoxin family protein [Kaistia adipata]) HSP 1 Score: 159.1 bits (401), Expect = 1.800e-35 Identity = 75/203 (36.95%), Postives = 125/203 (61.58%), Query Frame = 0 Query: 44 RVLLIHAHPLGAASFNGACFTTAHHGLQEAGHEVKTLKLYEDKFQPLMQPSDIKEYFKPLAERDEADAPDKAALLRYVALLKWCDSLIFVYPTWWYAMPAILKGWIERTFLPHSTWTLPSPSSPPASVVGLVPCLENIKKVGVITTYGSTWGVIRYVGDPGRRIIARGLRPLFSRECTVLWLGLYNCDTATQKAREGFLAEVE 247 R L++ AHP+ SF A T L +GHEV+ L LY F P+M + + Y P+ ++ + ++AL+KWC+ L+FVYPTWW++ PA+LKGW+ER ++PH+T+ +P+ + G P ++NI+K+ V+TT G++W + + +G+PGRRI+ RG+R L C ++ Y D++T ++R +LA+V+ Sbjct: 2 RALVVFAHPV-PESFGAAVRDTVVAALNRSGHEVRLLDLYASGFNPVMGADERRVYNDPVV--------NEVPIADHLALIKWCEILVFVYPTWWFSPPAMLKGWLERVWVPHATFIMPTATR------GSRPGMKNIRKLAVVTTCGASWTLSKIIGEPGRRILLRGIRTLCHPLCRTSYMAHYKMDSSTPESRARYLAKVD 189
BLAST of NO08G04340 vs. NCBI_GenBank
Match: WP_050472379.1 (flavodoxin family protein [Pannonibacter phragmitetus] >KND19655.1 NAD(P)H dehydrogenase [Pannonibacter phragmitetus] >OXS41242.1 NAD(P)H dehydrogenase [Pannonibacter phragmitetus BB]) HSP 1 Score: 159.1 bits (401), Expect = 1.800e-35 Identity = 76/209 (36.36%), Postives = 129/209 (61.72%), Query Frame = 0 Query: 44 RVLLIHAHPLGAASFNGACFTTAHHGLQEAGHEVKTLKLYEDKFQPLMQPSDIKEYFKPLAERDEADAPDKAALLRYVALLKWCDSLIFVYPTWWYAMPAILKGWIERTFLPHSTWTLPSPSSPPASVVGLVPCLENIKKVGVITTYGSTWGVIRYVGDPGRRIIARGLRPLFSRECTVLWLGLYNCDTATQKAREGFLAEVEAYMREF 253 + L++++HP+ SFN + L++AGHEV+ L LY + FQP M + + Y + D P KA +V + WCD ++FVYPTWW+ +PA+LKGW +R ++PH T+ +PS + G+ P +++I+K+ ++TT G++W V + +G+PGR+ I RGLR L + C L+L Y D++TQ++R+ ++ +V + +F Sbjct: 2 KALVVYSHPV-PESFNASMRDHVVSVLKQAGHEVRLLDLYAEGFQPAMSADERRGYH----DVDSNVLPVKA----HVEAILWCDMMVFVYPTWWFGLPAMLKGWFDRVWVPHVTFEMPSEHT------GMRPKMQHIRKIAIVTTCGASWFVSKLMGEPGRKTIMRGLRALCAPRCKTLYLAHYRMDSSTQESRDRYVKKVARRLAKF 195 The following BLAST results are available for this feature:
BLAST of NO08G04340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G04340 ID=NO08G04340|Name=NO08G04340|organism=Nannochloropsis oceanica|type=gene|length=1343bpback to top protein sequence of NO08G04340.1 >NO08G04340.1-protein ID=NO08G04340.1-protein|Name=NO08G04340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=253bpback to top Synonyms
Publications
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