NO08G04140, NO08G04140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G04140 vs. NCBI_GenBank
Match: WP_088890484.1 (family 2 glycosyl transferase [Leptolyngbya ohadii]) HSP 1 Score: 202.2 bits (513), Expect = 2.400e-48 Identity = 89/165 (53.94%), Postives = 120/165 (72.73%), Query Frame = 0 Query: 146 HKWSTYLDAYHRHFNRFRTQAKITMVEVGVQSGGSIEMWRSYFGADKLNYIGIDINPECKQFEKDGVRIVIGNQGDPAFWEQFKKEIPDELDIFVDDGGHTMNQQIVTFDKMFWGVRDGGIYLCEDLHTSYWQEYEGGYLNNNSMIEKSKTLIDTINAWHSKEAG 311 HKW+ Y + Y RHF+RFR + ++E+GV GGS++MWR+YFG IG+DI+P CK+ E++G+ I+IG+Q D F + ++P +DI +DDGGHTM QQI+TF+++F V++ G+YLCEDLHTSYWQEY GGY N NS IE SK ID INAWHS + G Sbjct: 17 HKWTHYFEIYDRHFSRFR-NTDVCILEIGVYHGGSLQMWRNYFG-PYAKIIGVDIDPRCKELEEEGIEIIIGDQEDREFLASLRSKLP-PVDILIDDGGHTMRQQIITFEELFPLVKEDGVYLCEDLHTSYWQEYGGGYRNPNSFIEYSKAFIDQINAWHSCDPG 178
BLAST of NO08G04140 vs. NCBI_GenBank
Match: WP_083295870.1 (class I SAM-dependent methyltransferase [Sphingobacterium sp. HMSC13C05]) HSP 1 Score: 197.2 bits (500), Expect = 7.600e-47 Identity = 92/170 (54.12%), Postives = 122/170 (71.76%), Query Frame = 0 Query: 146 HKWSTYLDAYHRHFNRFRTQAKITMVEVGVQSGGSIEMWRSYFGADKLNYIGIDINPECKQFEKDGVRIVIGNQGDPAFWEQFKKEIPDELDIFVDDGGHTMNQQIVTFDKMFWGVRDGGIYLCEDLHTSYWQEYEGGYLNNNSMIEKSKTLIDTINAWHSKEAGLQVRG 316 +KW Y D Y RHF+RF+ + +I ++EVGV GGS++MW++YFG D+ GIDINP CK+ E++ V I IG+Q D F Q K+ IP +DI +DDGGHTM QQIVTF+++F V+D G+YLCEDLHTSY Y GG+ N + IE SK ID INA+HS++ GL+V G Sbjct: 17 NKWMHYFDIYDRHFSRFKGK-EIVVLEVGVFQGGSLQMWKNYFG-DRAKIYGIDINPHCKELEEENVEIFIGSQSDRKFLRQVKESIP-PIDILIDDGGHTMKQQIVTFEELFDHVKDNGVYLCEDLHTSYQVFYGGGHKRNGTFIEYSKNFIDYINAYHSEQRGLKVNG 183
BLAST of NO08G04140 vs. NCBI_GenBank
Match: WP_084823323.1 (class I SAM-dependent methyltransferase [Sphingobacterium sp. Ag1]) HSP 1 Score: 197.2 bits (500), Expect = 7.600e-47 Identity = 92/170 (54.12%), Postives = 122/170 (71.76%), Query Frame = 0 Query: 146 HKWSTYLDAYHRHFNRFRTQAKITMVEVGVQSGGSIEMWRSYFGADKLNYIGIDINPECKQFEKDGVRIVIGNQGDPAFWEQFKKEIPDELDIFVDDGGHTMNQQIVTFDKMFWGVRDGGIYLCEDLHTSYWQEYEGGYLNNNSMIEKSKTLIDTINAWHSKEAGLQVRG 316 +KW Y D Y RHF+RF+ + +I ++EVGV GGS++MW++YFG D+ GIDINP CK+ E++ V I IG+Q D F Q K+ IP +DI +DDGGHTM QQIVTF+++F V+D G+YLCEDLHTSY Y GG+ N + IE SK ID INA+HS++ GL+V G Sbjct: 17 NKWMHYFDIYDRHFSRFKGK-EIVVLEVGVFQGGSLQMWKNYFG-DRAKIYGIDINPHCKELEEENVEIFIGSQSDRKFLRQVKESIP-PIDILIDDGGHTMKQQIVTFEELFDHVKDSGVYLCEDLHTSYQVFYGGGHKRNGTFIEYSKNFIDYINAYHSEQRGLKVNG 183
BLAST of NO08G04140 vs. NCBI_GenBank
Match: WP_083663620.1 (class I SAM-dependent methyltransferase [Sphingobacterium sp. B29]) HSP 1 Score: 196.4 bits (498), Expect = 1.300e-46 Identity = 92/170 (54.12%), Postives = 122/170 (71.76%), Query Frame = 0 Query: 146 HKWSTYLDAYHRHFNRFRTQAKITMVEVGVQSGGSIEMWRSYFGADKLNYIGIDINPECKQFEKDGVRIVIGNQGDPAFWEQFKKEIPDELDIFVDDGGHTMNQQIVTFDKMFWGVRDGGIYLCEDLHTSYWQEYEGGYLNNNSMIEKSKTLIDTINAWHSKEAGLQVRG 316 +KW Y D Y RHF+RF+ + +I ++EVGV GGS++MW++YFG D+ GIDINP CK+ E++ V I IG+Q D F Q K+ IP +DI +DDGGHTM QQIVTF+++F V+D G+YLCEDLHTSY Y GG+ N + IE SK ID INA+HS++ GL+V G Sbjct: 17 NKWMHYFDVYDRHFSRFKGK-EIVVLEVGVFQGGSLQMWKNYFG-DRAKIYGIDINPHCKELEEENVEIFIGSQSDRKFLRQVKQSIP-PIDILIDDGGHTMIQQIVTFEELFDHVKDNGVYLCEDLHTSYQVFYGGGHKRNGTFIEYSKNFIDYINAYHSEQRGLKVNG 183
BLAST of NO08G04140 vs. NCBI_GenBank
Match: PKP33410.1 (hypothetical protein CVT99_00205 [Bacteroidetes bacterium HGW-Bacteroidetes-16]) HSP 1 Score: 196.4 bits (498), Expect = 1.300e-46 Identity = 90/180 (50.00%), Postives = 123/180 (68.33%), Query Frame = 0 Query: 134 TWFTDRQKGPGAHKWSTYLDAYHRHFNRFRTQAKITMVEVGVQSGGSIEMWRSYFGADKLNYIGIDINPECKQFEKDGVRIVIGNQGDPAFWEQFKKEIPDELDIFVDDGGHTMNQQIVTFDKMFWGVRDGGIYLCEDLHTSYWQEYEGGYLNNNSMIEKSKTLIDTINAWHSKEAGLQV 314 T+F +K HKW+ YL+ YH+HF RF + +VE+GV GGS++MW++YFG + Y G+DINP CK+FE++ + I+IG+Q D F + K +IP +DI +DDGGHTM QQI +F+ +F V+D GIYLCEDLHTSYW+E+ GG + IE SK LID +NAWH + L V Sbjct: 7 TYFYSNRKNI-VHKWAHYLEIYHQHFKRF-VGTECVVVEIGVSQGGSLQMWKNYFGEKAVIY-GLDINPYCKEFEEENIHIIIGSQSDRKFLQDLKSKIP-RIDILIDDGGHTMEQQITSFEVLFDHVKDDGIYLCEDLHTSYWEEFGGGLNKPTTFIEFSKRLIDQLNAWHIRNDELPV 182
BLAST of NO08G04140 vs. NCBI_GenBank
Match: WP_051228071.1 (class I SAM-dependent methyltransferase [Gillisia sp. JM1]) HSP 1 Score: 194.1 bits (492), Expect = 6.400e-46 Identity = 88/178 (49.44%), Postives = 121/178 (67.98%), Query Frame = 0 Query: 136 FTDRQKGPGAHKWSTYLDAYHRHFNRFRTQAKITMVEVGVQSGGSIEMWRSYFGADKLNYIGIDINPECKQFEKDGVRIVIGNQGDPAFWEQFKKEIPDELDIFVDDGGHTMNQQIVTFDKMFWGVRDGGIYLCEDLHTSYWQEYEGGYLNNNSMIEKSKTLIDTINAWHSKEAGLQV 314 F + HKW Y D Y F +++ + + ++E+GV GGS+ MW YFG ++ IDINP CKQFE + ++I IG+Q D F + K +IP +LDI +DDGGHTM QQIV+F++++ + D GIYLCEDLHTSYW+ Y GG+ N NS IE SK +ID+INAWHSK++ L+V Sbjct: 7 FFENNTSNAIHKWRHYFDIYDFWFKKYKNK-PVVILEIGVYQGGSLNMWGDYFG-EEAKIFAIDINPLCKQFETENIKIFIGSQEDKEFLKYVKTQIP-KLDILIDDGGHTMLQQIVSFEELYEHINDDGIYLCEDLHTSYWKNYGGGFKNPNSFIEYSKNIIDSINAWHSKDSKLKV 181
BLAST of NO08G04140 vs. NCBI_GenBank
Match: WP_052361658.1 (hypothetical protein [Geomicrobium sp. JCM 19038] >GAK09043.1 hypothetical protein JCM19038_2856 [Geomicrobium sp. JCM 19038]) HSP 1 Score: 193.7 bits (491), Expect = 8.400e-46 Identity = 86/168 (51.19%), Postives = 116/168 (69.05%), Query Frame = 0 Query: 146 HKWSTYLDAYHRHFNRFRTQAKITMVEVGVQSGGSIEMWRSYFGADKLNYIGIDINPECKQFEKDGVRIVIGNQGDPAFWEQFKKEIPDELDIFVDDGGHTMNQQIVTFDKMFWGVRDGGIYLCEDLHTSYWQEYEGGYLNNNSMIEKSKTLIDTINAWHSKEAGLQV 314 HKW Y D Y RHF RF + ++E+GV GGS++MW+ YFG D N G+DINP CK FE+D V+++IG+QGD FW+ K +P DI +DDGGH+M+QQI+TF++MF + + G++L EDLHTSY Y GGY N+ IE SK ID +NAWHS++ LQ+ Sbjct: 17 HKWDHYFDIYERHFERF-VNTDVNVMEIGVFHGGSLQMWKDYFGKD-ANIYGLDINPTCKSFEEDRVKVMIGDQGDREFWKSIKPTLP-TFDIIIDDGGHSMDQQIITFEEMFPLLSENGVFLIEDLHTSYMSYYAGGYEKANTFIEYSKKRIDELNAWHSEDERLQL 181
BLAST of NO08G04140 vs. NCBI_GenBank
Match: KEO72991.1 (hypothetical protein EL17_15365 [Anditalea andensis]) HSP 1 Score: 193.7 bits (491), Expect = 8.400e-46 Identity = 89/168 (52.98%), Postives = 119/168 (70.83%), Query Frame = 0 Query: 146 HKWSTYLDAYHRHFNRFRTQAKITMVEVGVQSGGSIEMWRSYFGADKLNYIGIDINPECKQFEKDGVRIVIGNQGDPAFWEQFKKEIPDELDIFVDDGGHTMNQQIVTFDKMFWGVRDGGIYLCEDLHTSYWQEYEGGYLNNNSMIEKSKTLIDTINAWHSKEAGLQV 314 HKW + D Y RHF+RFR Q +IT++E+GV GGS++MW++YFG K GIDINP+CKQ E+ + I IG+Q D F + K +IP +DI +DDGGHTM QQIVT+++MF V+D G+YL EDLHTSYW ++ GGY + IE SK ID +NA HS++ L+V Sbjct: 17 HKWIHFFDVYDRHFSRFRDQ-EITILEIGVSQGGSLQMWKNYFG-PKAKIYGIDINPQCKQLEEKNIEIFIGSQADRDFLKNVKAQIP-HVDILIDDGGHTMEQQIVTYEEMFDHVKDNGVYLAEDLHTSYWLKFGGGYQRKGTFIEYSKKFIDYLNAHHSEQKTLKV 181
BLAST of NO08G04140 vs. NCBI_GenBank
Match: WP_069659305.1 (class I SAM-dependent methyltransferase [Arcticibacter eurypsychrophilus]) HSP 1 Score: 193.4 bits (490), Expect = 1.100e-45 Identity = 80/168 (47.62%), Postives = 121/168 (72.02%), Query Frame = 0 Query: 146 HKWSTYLDAYHRHFNRFRTQAKITMVEVGVQSGGSIEMWRSYFGADKLNYIGIDINPECKQFEKDGVRIVIGNQGDPAFWEQFKKEIPDELDIFVDDGGHTMNQQIVTFDKMFWGVRDGGIYLCEDLHTSYWQEYEGGYLNNNSMIEKSKTLIDTINAWHSKEAGLQV 314 HKW+ Y D Y +HF+RFR + ++ ++E+GV GGS++MW+ YFG + Y GID+NP+CK E++ ++I IG+Q D F + K+++P +DI +DDGGHTMNQQIV+++++F ++D G+Y CED+HTSYW + GGY + IE SK ID +NA+HS++ L V Sbjct: 17 HKWNHYFDVYEKHFSRFRNK-EVVILEIGVSQGGSLQMWKDYFGVNAKIY-GIDVNPKCKDLEEENIKIFIGSQSDRKFLKTVKQQMP-PIDILIDDGGHTMNQQIVSYEELFSSIKDNGVYFCEDVHTSYWLGHGGGYKRRGTFIEYSKKFIDLLNAYHSEQRALNV 181
BLAST of NO08G04140 vs. NCBI_GenBank
Match: OGA22739.1 (hypothetical protein A3I02_06080 [Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26]) HSP 1 Score: 192.2 bits (487), Expect = 2.400e-45 Identity = 90/174 (51.72%), Postives = 117/174 (67.24%), Query Frame = 0 Query: 135 WFTDRQKGPGAHKWSTYLDAYHRHFNRFRTQAKITMVEVGVQSGGSIEMWRSYFGADKLNYIGIDINPECKQFEKDGVRIVIGNQGDPAFWEQFKKEIPDELDIFVDDGGHTMNQQIVTFDKMFWGVRDGGIYLCEDLHTSYWQEYEGGYLNNNSMIEKSKTLIDTINAWHSKE 309 WF++ G KW YLD YHRHF RFR ++ + ++EVGV GGS+EMW YFG Y +D +P CK FE + +I+IG+Q D F Q + E+P DI VDDGGH MNQQI TF++++ V D G+YLCEDLHTSYW+++ GGY S +E SK LID +NAWHS+E Sbjct: 33 WFSN-HTGRYVSKWDHYLDIYHRHFARFRGRSPV-VLEVGVFHGGSLEMWHDYFGPGCRLY-AVDNDPRCKAFEDEKTKIMIGDQADRGFLAQLRMEVP-RADILVDDGGHFMNQQIATFEELYRHVADDGVYLCEDLHTSYWEDFGGGYRKAGSFVEFSKALIDQLNAWHSRE 202 The following BLAST results are available for this feature:
BLAST of NO08G04140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G04140 ID=NO08G04140|Name=NO08G04140|organism=Nannochloropsis oceanica|type=gene|length=1989bpback to top protein sequence of NO08G04140.1 >NO08G04140.1-protein ID=NO08G04140.1-protein|Name=NO08G04140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=267bpback to top protein sequence of NO08G04140.2 >NO08G04140.2-protein ID=NO08G04140.2-protein|Name=NO08G04140.2|organism=Nannochloropsis oceanica|type=polypeptide|length=353bpback to top protein sequence of NO08G04140.3 >NO08G04140.3-protein ID=NO08G04140.3-protein|Name=NO08G04140.3|organism=Nannochloropsis oceanica|type=polypeptide|length=316bpback to top protein sequence of NO08G04140.4 >NO08G04140.4-protein ID=NO08G04140.4-protein|Name=NO08G04140.4|organism=Nannochloropsis oceanica|type=polypeptide|length=316bpback to top Synonyms
Publications
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