NO08G03450, NO08G03450 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G03450 vs. NCBI_GenBank
Match: EWM26784.1 (ubiquitin-conjugating enzyme [Nannochloropsis gaditana]) HSP 1 Score: 379.4 bits (973), Expect = 1.200e-101 Identity = 192/254 (75.59%), Postives = 212/254 (83.46%), Query Frame = 0 Query: 98 QLLHPFLALTT-----RGGASQSSSLMGRILRAWRGSAKNGGSIYGRMKRFLGALWNGKRSGASNCNTGGRSNIRSA--GGAGXXXXXXXXXXXKSSRAEKHLGTEFRRGNANFRIQKELREWLANPMDNMHVAVGDNLRVWVVTLTGAKGTVFAGEKYKLKFTFPVDYPSKPPSVYFLQPTPRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSAKEKKIPQDNHVHADNPPGREQANWLYHDDKC 345 ++LHP L L T RGGA QSSSL+GRI+RAWRGSAK GGSI+GR+KRFLG LWN +G+S + RS IRS GG G +R +KHLG EFRRGNANFR+QKELREWLANP +N+ VAVGDN+RVWVVTLTGAKGT+FAGEKYKLKFTFP+DYPSKPPSVYFLQP PRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSA+EKKIPQDNHVHADNPPG+EQANWLYHDD+C Sbjct: 70 RVLHPQLPLITLLAQKRGGALQSSSLLGRIMRAWRGSAKRGGSIHGRIKRFLGLLWNA--AGSSAGHDVKRSTIRSGSLGGVGGGRLG-------GNRMQKHLGKEFRRGNANFRVQKELREWLANPTENLQVAVGDNIRVWVVTLTGAKGTIFAGEKYKLKFTFPMDYPSKPPSVYFLQPPPRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSAREKKIPQDNHVHADNPPGKEQANWLYHDDRC 314
BLAST of NO08G03450 vs. NCBI_GenBank
Match: CEM32784.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 225.7 bits (574), Expect = 2.200e-55 Identity = 99/156 (63.46%), Postives = 124/156 (79.49%), Query Frame = 0 Query: 189 AEKHLGTEFRRGNANFRIQKELREWLANPMDNMHVAVGDNLRVWVVTLTGAKGTVFAGEKYKLKFTFPVDYPSKPPSVYFLQPTPRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSAKEKKIPQDNHVHADNPPGREQANWLYHDDKC 345 A+ HL FR G+ N+RIQKEL+++L P D+ +AVG N+RVW++TLTG +GT++ GEKY+LK FP +YP KPP +YFLQPTPRH HVY+NGDICLNLLG DW+P +T + +ALSILSMLSSAKEKK+P DN HAD G +Q NW+YHDDKC Sbjct: 51 AKDHLRRSFRPGHVNYRIQKELKDFLTTPPDHCEIAVGSNIRVWIITLTGVEGTLYEGEKYRLKIVFPPEYPLKPPIIYFLQPTPRHPHVYSNGDICLNLLGTDWKPTLTVASVALSILSMLSSAKEKKLPLDNASHADLKAGGQQHNWMYHDDKC 206
BLAST of NO08G03450 vs. NCBI_GenBank
Match: CBJ26141.1 (Ubiquitin-conjugating enzyme [Ectocarpus siliculosus]) HSP 1 Score: 211.1 bits (536), Expect = 5.600e-51 Identity = 116/260 (44.62%), Postives = 161/260 (61.92%), Query Frame = 0 Query: 105 ALTTRGGASQSSSLMGRILRAWRGSAK-----------NGGSIYGRMKRFLGALWNGKRSGASNCN--TGGRSNI----RSAGGAGXXXXXXXXXXXKSSRAEKHLGTEFRRGNANFRIQKELREWLANPMDNMHVAVGDNLRVWVVTLTGAKGTVFAGEKYKLKFTFPVDYPSKPPSVYFLQ--PTPRHEHVYTNGDICLNLL-GRDWRPNMTASMLALSILSMLSSAKEKKIPQDNHVHADNPPGREQANWLYHDDKC 345 AL RGG+ + SL +R + GG + R+KR + ++ R G N+ +S G A K + HL +R GNAN+RIQKEL+E++ANP D V+VG N+RVW++T++GA+GT++AGEK++L+ +FP +YP+KPP+VYFLQ P P+H+H+YTNGDICL+LL RDW+PN+T LALSILSMLSSAKEK++P+DN HA+ PG+ Q W+YHDD C Sbjct: 71 ALVVRGGSDEDPSLTTLFMRVLMPGFRRDKGGDGELDLEGGGLMRRLKRLVSGVFRKVRGSPVPITEPKGEAKNVATKKKSKGKA------------KGATTTSHLEKTYRPGNANYRIQKELKEFMANPPDCCKVSVGKNIRVWIITISGAEGTIYAGEKFRLRVSFPEEYPTKPPAVYFLQSPPPPKHQHIYTNGDICLSLLSSRDWKPNLTVMSLALSILSMLSSAKEKRLPEDNATHAEARPGQAQ-QWIYHDDLC 317
BLAST of NO08G03450 vs. NCBI_GenBank
Match: XP_002178369.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50034.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 203.0 bits (515), Expect = 1.500e-48 Identity = 92/161 (57.14%), Postives = 122/161 (75.78%), Query Frame = 0 Query: 185 KSSRAEKHLGTEFRRGNANFRIQKELREWLANPMDNMHVAVGDNLRVWVVTLTGAKGTVFAGEKYKLKFTFPVDYPSKPPSVYFLQPT-PRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSAKEKKIPQDNHVHADNPPGREQANWLYHDDKC 345 +S A+ HL + + + N+RIQ+EL+ +L++P N+ V VG NLRVW+V++ GAKGTV+ GE +KL+ +FP YP+ PPSVYFL P+ P HEHVYTNGDICL+LLG+DWRP MTA +A+SILS+LSSA+ K +P DN HA N PG Q +W+YHDD C Sbjct: 9 RSPAADAHLQAKLKSTSPNYRIQRELKAFLSDPPSNLSVKVGKNLRVWIVSIEGAKGTVYEGEIFKLRISFPPQYPTVPPSVYFLPPSIPVHEHVYTNGDICLSLLGKDWRPTMTAQSIAVSILSILSSAQSKSLPMDNARHAQNKPGEYQKDWVYHDDNC 169
BLAST of NO08G03450 vs. NCBI_GenBank
Match: SBS87761.1 (ubiquitin-conjugating enzyme E2, putative [Plasmodium malariae]) HSP 1 Score: 196.8 bits (499), Expect = 1.100e-46 Identity = 92/160 (57.50%), Postives = 120/160 (75.00%), Query Frame = 0 Query: 186 SSRAEKHLGTEFRRGNANFRIQKELREWLANPMDNMHVAV-GDNLRVWVVTLTGAKGTVFAGEKYKLKFTFPVDYPSKPPSVYFLQPTPRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSAKEKKIPQDNHVHADNPPGREQANWLYHDDKC 345 S+ +KH+ T++ GNAN+RIQKEL +L NP N + V +N+R+W+VT TG + T++A E YK+K F DYP KPP+VYFLQ P+H HVY+NGDICL+LLG D+ P+++ S L LSI+SMLSSAKEKK+P DN+ HAD PG Q N+LYHDDKC Sbjct: 42 STCVQKHIRTKYNLGNANYRIQKELHNFLKNPPINCTIDVHPNNIRIWIVTYTGLENTIYANEIYKIKIIFSDDYPLKPPTVYFLQKPPKHTHVYSNGDICLSLLGDDYNPSLSISGLILSIISMLSSAKEKKLPIDNYTHADAKPGSSQNNFLYHDDKC 201
BLAST of NO08G03450 vs. NCBI_GenBank
Match: SBT79971.1 (ubiquitin-conjugating enzyme E2, putative [Plasmodium malariae] >SCO93606.1 ubiquitin-conjugating enzyme E2, putative [Plasmodium malariae]) HSP 1 Score: 196.8 bits (499), Expect = 1.100e-46 Identity = 92/160 (57.50%), Postives = 120/160 (75.00%), Query Frame = 0 Query: 186 SSRAEKHLGTEFRRGNANFRIQKELREWLANPMDNMHVAV-GDNLRVWVVTLTGAKGTVFAGEKYKLKFTFPVDYPSKPPSVYFLQPTPRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSAKEKKIPQDNHVHADNPPGREQANWLYHDDKC 345 S+ +KH+ T++ GNAN+RIQKEL +L NP N + V +N+R+W+VT TG + T++A E YK+K F DYP KPP+VYFLQ P+H HVY+NGDICL+LLG D+ P+++ S L LSI+SMLSSAKEKK+P DN+ HAD PG Q N+LYHDDKC Sbjct: 111 STCVQKHIRTKYNLGNANYRIQKELHNFLKNPPINCTIDVHPNNIRIWIVTYTGLENTIYANEIYKIKIIFSDDYPLKPPTVYFLQKPPKHTHVYSNGDICLSLLGDDYNPSLSISGLILSIISMLSSAKEKKLPIDNYTHADAKPGSSQNNFLYHDDKC 270
BLAST of NO08G03450 vs. NCBI_GenBank
Match: SBT77983.1 (ubiquitin-conjugating enzyme E2, putative [Plasmodium ovale]) HSP 1 Score: 196.1 bits (497), Expect = 1.900e-46 Identity = 91/160 (56.88%), Postives = 118/160 (73.75%), Query Frame = 0 Query: 186 SSRAEKHLGTEFRRGNANFRIQKELREWLANPMDNMHVAV-GDNLRVWVVTLTGAKGTVFAGEKYKLKFTFPVDYPSKPPSVYFLQPTPRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSAKEKKIPQDNHVHADNPPGREQANWLYHDDKC 345 S+ +KH+ T++ GN+N+RIQKEL +L NP N + V +N+R+W+V G + T++A E YK+K FP DYP KPP VYFLQ P+H HVYTNGDICL+LLG D+ P+++ S L LSI+SMLSSAKEKK+P DN+ HAD PG Q N+LYHDDKC Sbjct: 93 STSVQKHIRTKYNLGNSNYRIQKELHNFLKNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKIKIIFPNDYPLKPPIVYFLQKPPKHTHVYTNGDICLSLLGDDYNPSLSISGLVLSIISMLSSAKEKKLPVDNYTHADAKPGSSQNNFLYHDDKC 252
BLAST of NO08G03450 vs. NCBI_GenBank
Match: XP_002259899.1 (ubiquitin-conjugating enzyme, putative [Plasmodium knowlesi strain H] >CAQ41166.1 ubiquitin-conjugating enzyme, putative [Plasmodium knowlesi strain H] >SBO26561.1 ubiquitin-conjugating enzyme E2, putative [Plasmodium knowlesi strain H] >SBO24443.1 ubiquitin-conjugating enzyme E2, putative [Plasmodium knowlesi strain H] >OTN66532.1 putative Ubiquitin-conjugating enzyme E2 [Plasmodium knowlesi]) HSP 1 Score: 195.7 bits (496), Expect = 2.400e-46 Identity = 92/160 (57.50%), Postives = 118/160 (73.75%), Query Frame = 0 Query: 186 SSRAEKHLGTEFRRGNANFRIQKELREWLANPMDNMHVAV-GDNLRVWVVTLTGAKGTVFAGEKYKLKFTFPVDYPSKPPSVYFLQPTPRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSAKEKKIPQDNHVHADNPPGREQANWLYHDDKC 345 S+ +KH+ T++ GNAN+RIQKEL +L NP N + V +N+R+W+V G + T++A E YKLK FP DYP KPP VYFLQ P+H HVY+NGDICL+LLG D+ P+++ S L LSI+SMLSSAKEKK+P DN+ HAD PG Q N+LYHDDKC Sbjct: 103 STSVKKHMRTKYNMGNANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLQNTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYSNGDICLSLLGDDYNPSLSISGLVLSIISMLSSAKEKKLPIDNYTHADAKPGSNQNNFLYHDDKC 262
BLAST of NO08G03450 vs. NCBI_GenBank
Match: KMZ79213.1 (ubiquitin-conjugating enzyme E2 [Plasmodium vivax India VII] >KMZ85358.1 ubiquitin-conjugating enzyme E2 [Plasmodium vivax Brazil I] >KMZ91235.1 ubiquitin-conjugating enzyme E2 [Plasmodium vivax Mauritania I] >KMZ98374.1 ubiquitin-conjugating enzyme E2 [Plasmodium vivax North Korean]) HSP 1 Score: 195.7 bits (496), Expect = 2.400e-46 Identity = 92/160 (57.50%), Postives = 118/160 (73.75%), Query Frame = 0 Query: 186 SSRAEKHLGTEFRRGNANFRIQKELREWLANPMDNMHVAV-GDNLRVWVVTLTGAKGTVFAGEKYKLKFTFPVDYPSKPPSVYFLQPTPRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSAKEKKIPQDNHVHADNPPGREQANWLYHDDKC 345 S+ +KH+ T++ GNAN+RIQKEL +L NP N + V +N+R+W+V G + T++A E YKLK FP DYP KPP VYFLQ P+H HVY+NGDICL+LLG D+ P+++ S L LSI+SMLSSAKEKK+P DN+ HAD PG Q N+LYHDDKC Sbjct: 56 STSVKKHMRTKYNMGNANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYSNGDICLSLLGDDYNPSLSISGLVLSIISMLSSAKEKKLPIDNYTHADAKPGSSQNNFLYHDDKC 215
BLAST of NO08G03450 vs. NCBI_GenBank
Match: XP_001614234.1 (ubiquitin-conjugating enzyme E2, putative [Plasmodium vivax] >EDL44507.1 ubiquitin-conjugating enzyme E2, putative [Plasmodium vivax]) HSP 1 Score: 195.7 bits (496), Expect = 2.400e-46 Identity = 92/160 (57.50%), Postives = 118/160 (73.75%), Query Frame = 0 Query: 186 SSRAEKHLGTEFRRGNANFRIQKELREWLANPMDNMHVAV-GDNLRVWVVTLTGAKGTVFAGEKYKLKFTFPVDYPSKPPSVYFLQPTPRHEHVYTNGDICLNLLGRDWRPNMTASMLALSILSMLSSAKEKKIPQDNHVHADNPPGREQANWLYHDDKC 345 S+ +KH+ T++ GNAN+RIQKEL +L NP N + V +N+R+W+V G + T++A E YKLK FP DYP KPP VYFLQ P+H HVY+NGDICL+LLG D+ P+++ S L LSI+SMLSSAKEKK+P DN+ HAD PG Q N+LYHDDKC Sbjct: 56 STSVKKHMRTKYNMGNANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYSNGDICLSLLGDDYNPSLSISGLVLSIISMLSSAKEKKLPIDNYTHADAKPGSSQNNFLYHDDKC 215 The following BLAST results are available for this feature:
BLAST of NO08G03450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G03450 ID=NO08G03450|Name=NO08G03450|organism=Nannochloropsis oceanica|type=gene|length=1806bpback to top protein sequence of NO08G03450.1 >NO08G03450.1-protein ID=NO08G03450.1-protein|Name=NO08G03450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=345bpback to top protein sequence of NO08G03450.2 >NO08G03450.2-protein ID=NO08G03450.2-protein|Name=NO08G03450.2|organism=Nannochloropsis oceanica|type=polypeptide|length=258bpback to top Synonyms
Publications
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