NO08G03000, NO08G03000 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G03000 vs. NCBI_GenBank
Match: CEM11063.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 112.5 bits (280), Expect = 2.700e-21 Identity = 77/236 (32.63%), Postives = 120/236 (50.85%), Query Frame = 0 Query: 101 PLGLALEDFGNRDGKYRTYVSKTLRGSQATGK-GIRIPALVVAVNGQNVEGLPRKMVAQLIRDTIEGRNGMGKGGVVTVTFRDPSKFMELLNDKTAAPGDEITTQLAPQTKARDAQTLAVKKTFVPEICQTGAMYGDLLEVKYTTSLADGTFLDAT---GVSTPGRGGDSTVYFVLGEQVAGTVPKGWDLALVGACVGEQRVIRTPSVLAYGNKGLKRRGIPPDATIIYNVEVIGI 333 PLG+ LE+ V + + GS+A IR L+ +VNGQ+V+GL V LIR E G+ G + + FR + + D I KA+ + + + +PE+C A GDLLE++Y L DG +D++ G S PG+G S++Y +LG++ + + + L C GE+R I P A+G++GL + IPPDAT+IY+VE++ I Sbjct: 151 PLGIELEETAE-----GIKVKQLVAGSEAANNPDIRPGLLLESVNGQSVQGLRLSDVKSLIRMRREMGEKEGE-GTLRLAFRGEGGGRGERDAVSQGVADTI-------DKAKREGQVIIDRRKIPEVCSLKAKRGDLLELRYVGRLEDGKLIDSSRLDGRSVPGKGAGSSIYLLLGDKPPRKLIRKFQSGLYSMCEGEKRRITIPPSAAFGSEGLPEKAIPPDATLIYDVELVKI 373
BLAST of NO08G03000 vs. NCBI_GenBank
Match: XP_005765893.1 (hypothetical protein EMIHUDRAFT_66770, partial [Emiliania huxleyi CCMP1516] >EOD13464.1 hypothetical protein EMIHUDRAFT_66770, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 110.9 bits (276), Expect = 7.700e-21 Identity = 54/111 (48.65%), Postives = 67/111 (60.36%), Query Frame = 0 Query: 225 PEICQTGAMYGDLLEVKYTTSLA-DGTFLDATGVSTPGRGGDSTVYFVLGEQVAGTVPKGWDLALVGACVGEQRVIRTPSVLAYGNKGLKRRGIPPDATIIYNVEVIGING 335 P C+ A GDL+E+ Y LA G D G+ R GD T+ FVLG Q AG P WD+ LVG C+GEQR + P L YG KGL +RG+PPDA + Y VE++ ING Sbjct: 3 PRGCRRPAADGDLIEIGYEGRLAGSGALFD--GMELAKRQGDETIQFVLGRQPAGQFPPSWDVGLVGMCIGEQRTLEVPPTLGYGAKGLPKRGVPPDAALTYRVELVAING 111
BLAST of NO08G03000 vs. NCBI_GenBank
Match: CBN75288.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 94.4 bits (233), Expect = 7.500e-16 Identity = 93/293 (31.74%), Postives = 125/293 (42.66%), Query Frame = 0 Query: 87 VGNDEYDVTFDVKQPLGLALEDFG-NRDGKYRTYVSKTLRGSQATGK-GIRIPALVVAVNGQNVEGLPRKMVAQLIRDTIEGRNGMGKGGVVTVTFRDPSKFMELLNDKTAAPGDE-------------------------------ITTQLAPQT--------KARDAQTLAVKKTFVPEICQTGAMYGDLLEVKYTTSLADGTFLDATGVSTPGRGGDSTVYFVLGEQVAGTVPKGWDLALVGACVGEQRVIRTPSVLAYGNKGLKRRGIPPD-----ATIIYNVEVIGIN 334 V +DE V F P+G+ L D G R YV++ L GSQA + +R V AV G+ E L K VA+LIR + R + + FRDP ELL + A D TT + P++ A + + PE+C T GDL+E +Y+ LA L S+ RG VLG G V KG DL+L CVGE+R I P+ LAYG KG K G+PPD A +++ VE++ IN Sbjct: 172 VQSDEVGVLFG-DGPIGIKLGDNPLKASGVCRVYVTEVLTGSQAIRQANLRAGFGVAAVGGKPAERLEPKEVAELIR--LSPR-------PMEIVFRDP----ELLGRRLQAEADRKAEAVKRRKQKAAADAXXXXXXXXXXXXXXXXTTAVDPRSGSVGNGGGSASSGELRVTQVGKKPEVCGTRTKAGDLIEFRYSARLASD--LSVEFDSSDRRGTGLPYAIVLGN---GDVVKGLDLSLFDMCVGERRKIEIPARLAYGRKGSKAFGVPPDDGTGSADVVFGVELVSIN 445
BLAST of NO08G03000 vs. NCBI_GenBank
Match: EJK76227.1 (hypothetical protein THAOC_02024, partial [Thalassiosira oceanica]) HSP 1 Score: 94.0 bits (232), Expect = 9.800e-16 Identity = 44/92 (47.83%), Postives = 60/92 (65.22%), Query Frame = 0 Query: 248 DGTFLDATGVSTPGRGGDSTVYFVLGEQVAGTVPKGWDLALVGACVGEQRVIRTPSVLAYGNKGLKRRGIPPDATIIYNVEVIGINGNNLPR 340 DG+ + G PGRG D +VYFVLG+Q G P GWD+ L G CVGE+R + P VL +G +G RR IPP+AT+ Y+V ++ +NG P+ Sbjct: 7 DGSAVKINGNGIPGRGNDISVYFVLGKQPFGQFPPGWDVGLNGMCVGERRRLIIPPVLGFGAEGNPRRRIPPNATLQYDVTLVSLNGLATPQ 98
BLAST of NO08G03000 vs. NCBI_GenBank
Match: GAQ84127.1 (FKBP-type peptidyl-prolyl cis-trans isomerase [Klebsormidium nitens]) HSP 1 Score: 86.7 bits (213), Expect = 1.600e-13 Identity = 52/134 (38.81%), Postives = 75/134 (55.97%), Query Frame = 0 Query: 201 ITTQLAPQTKARDAQTLAVKKTFVPEICQTGAMYGDLLEVKYTTSLADGTFLDATGVSTPGRGGDSTVYFVLGEQVAGTVPKGWDLALVGACVGEQRVIRTPSVLAYGNKGLKRRGIPPDATIIYNVEVIGING 335 +T ++ + K++D L + F PE+C A GD + V Y SL DG+ DA + RG + F LG AG V KGWD + G C+GE+R +R PS L YG+ G + IP AT++++ E+I ING Sbjct: 20 LTDVVSAKKKSKDVTELQIGVKFKPEVCSIKASKGDQVSVHYRGSLTDGSQFDA----SYDRG--APFDFKLG---AGQVIKGWDQGIAGMCIGEKRKLRIPSSLGYGDHGSPPK-IPGGATLVFDTELIAING 143
BLAST of NO08G03000 vs. NCBI_GenBank
Match: PTQ47621.1 (hypothetical protein MARPO_0007s0072 [Marchantia polymorpha]) HSP 1 Score: 86.3 bits (212), Expect = 2.000e-13 Identity = 52/131 (39.69%), Postives = 75/131 (57.25%), Query Frame = 0 Query: 205 LAPQTKA-RDAQTLAVKKTFVPEICQTGAMYGDLLEVKYTTSLADGTFLDATGVSTPGRGGDSTVYFVLGEQVAGTVPKGWDLALVGACVGEQRVIRTPSVLAYGNKGLKRRGIPPDATIIYNVEVIGING 335 LA Q KA ++ + L + F P+ C A GD + V Y +L DGT D + GRG + F LG AG V KGWD L+G C+GE+R ++ PS L YG+ G + IP AT++++ E++G+NG Sbjct: 24 LAVQAKADKEVKELQIGVKFKPKTCDVKAHKGDKVSVHYRGALTDGTVFD----ESYGRG--EPIDFELG---AGRVIKGWDQGLLGMCLGEKRKLKIPSKLGYGDNGSPPK-IPGGATLVFDTELVGVNG 144
BLAST of NO08G03000 vs. NCBI_GenBank
Match: XP_018844175.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP15-1 [Juglans regia]) HSP 1 Score: 85.5 bits (210), Expect = 3.500e-13 Identity = 49/125 (39.20%), Postives = 69/125 (55.20%), Query Frame = 0 Query: 210 KARDAQTLAVKKTFVPEICQTGAMYGDLLEVKYTTSLADGTFLDATGVSTPGRGGDSTVYFVLGEQVAGTVPKGWDLALVGACVGEQRVIRTPSVLAYGNKGLKRRGIPPDATIIYNVEVIGING 335 K++D L + P+ C A GD ++V Y +L DGT D++ DS + F LG G V KGWD L+GACVGE+R ++ PS L YG++G IP AT+I+ EV+ +NG Sbjct: 28 KSKDVTELQIGVKHKPDSCDIQARKGDRIKVHYRGTLTDGTVFDSSFER------DSPIEFELG---TGQVIKGWDQGLLGACVGEKRKLKIPSKLGYGDQG-SPPTIPGGATLIFETEVVAVNG 142
BLAST of NO08G03000 vs. NCBI_GenBank
Match: PSR94955.1 (Peptidyl-prolyl cis-trans isomerase [Actinidia chinensis var. chinensis]) HSP 1 Score: 85.5 bits (210), Expect = 3.500e-13 Identity = 51/134 (38.06%), Postives = 74/134 (55.22%), Query Frame = 0 Query: 201 ITTQLAPQTKARDAQTLAVKKTFVPEICQTGAMYGDLLEVKYTTSLADGTFLDATGVSTPGRGGDSTVYFVLGEQVAGTVPKGWDLALVGACVGEQRVIRTPSVLAYGNKGLKRRGIPPDATIIYNVEVIGING 335 I T L K++D L + + PE C+ A GD ++V Y L DGT D S+ RG + F LG +G V KGWD L+G CVGE+R ++ P+ L YG +G + IP AT+I++ E++ +NG Sbjct: 20 ILTSLVSAKKSKDVTELQIGVKYKPESCEFQAHKGDRIKVHYRGKLTDGTVFD----SSFERG--DPIEFELG---SGQVIKGWDQGLLGMCVGEKRKLKIPAKLGYGEQG-SQPTIPGGATLIFDTELVAVNG 143
BLAST of NO08G03000 vs. NCBI_GenBank
Match: EFJ27172.1 (hypothetical protein SELMODRAFT_96017, partial [Selaginella moellendorffii]) HSP 1 Score: 84.0 bits (206), Expect = 1.000e-12 Identity = 50/125 (40.00%), Postives = 71/125 (56.80%), Query Frame = 0 Query: 210 KARDAQTLAVKKTFVPEICQTGAMYGDLLEVKYTTSLADGTFLDATGVSTPGRGGDSTVYFVLGEQVAGTVPKGWDLALVGACVGEQRVIRTPSVLAYGNKGLKRRGIPPDATIIYNVEVIGING 335 KA D + L + F P C+ A GD ++V Y SL DGT D S+ RG + F LG+ G V +GWD L+G CVGE+R ++ PS L YG++G + IP AT+I+ E++ +NG Sbjct: 5 KASDVKELQIGVKFKPLTCEIRAHKGDEVKVHYKGSLTDGTVFD----SSYTRG--DPIGFTLGQ---GQVIQGWDQGLLGMCVGEKRKLKIPSKLGYGDQGQPPK-IPGGATLIFETELVSVNG 119
BLAST of NO08G03000 vs. NCBI_GenBank
Match: PNH00607.1 (Peptidyl-prolyl cis-trans isomerase FKBP15-2 [Tetrabaena socialis]) HSP 1 Score: 84.0 bits (206), Expect = 1.000e-12 Identity = 50/123 (40.65%), Postives = 69/123 (56.10%), Query Frame = 0 Query: 210 KARDAQTLAVKKTFVPEICQTGAMYGDLLEVKYTTSLADGTFLDATGVSTPGRGGDSTVYFVLGEQVAGTVPKGWDLALVGACVGEQRVIRTPSVLAYGNKGLKRRGIPPDATIIYNVEVIGI 333 K +D + L + + PEIC GD + V YT L DGT D S+ RG T F LGE G V KGWD L+G CVGE+R ++ PS L YG+ G + IP AT++++VE++ + Sbjct: 24 KTKDVKELRIGVKYKPEICDRTTRNGDTVHVHYTGMLTDGTKFD----SSLDRGTPFT--FALGE---GRVIKGWDQGLLGMCVGEKRKLQIPSSLGYGDSGSPPK-IPGGATLVFDVELVKV 136 The following BLAST results are available for this feature:
BLAST of NO08G03000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G03000 ID=NO08G03000|Name=NO08G03000|organism=Nannochloropsis oceanica|type=gene|length=1237bpback to top protein sequence of NO08G03000.1 >NO08G03000.1-protein ID=NO08G03000.1-protein|Name=NO08G03000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=340bpback to top Synonyms
Publications
|