NO08G03000, NO08G03000 (gene) Nannochloropsis oceanica

Overview
NameNO08G03000
Unique NameNO08G03000
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1237
Alignment locationchr8:835492..836728 -

Link to JBrowse

Properties
Property NameValue
DescriptionPeptidylprolyl isomerase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:835492..836728 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR036034PDZ_sf
IPR023566PPIase_FKBP
IPR001179PPIase_FKBP_dom
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Homology
BLAST of NO08G03000 vs. NCBI_GenBank
Match: EWM26709.1 (Peptidyl-prolyl cis-trans isomerase [Nannochloropsis gaditana])

HSP 1 Score: 434.1 bits (1115), Expect = 4.000e-118
Identity = 220/296 (74.32%), Postives = 252/296 (85.14%), Query Frame = 0
Query:   47 MRMTVASSSNDRKGHLQSLASILLGAALSSPPPSLRQALAVGNDEYDVTFDVKQPLGLALEDFGNRDGKYRTYVSKTLRGSQATGKGIRIPALVVAVNGQNVEGLPRKMVAQLIRDTIEGRNGMGKGGVVTVTFRDPSKFMELLNDKT---AAPGDEITTQLAPQTKARDAQTLAVKKTFVPEICQTGAMYGDLLEVKYTTSLADGTFLDATGVSTPGRGGDSTVYFVLGEQVAGTVPKGWDLALVGACVGEQRVIRTPSVLAYGNKGLKRRGIPPDATIIYNVEVIGINGNNLPR 340
            +R+ ++ S  DR+G L+  AS+ L   L       ++A AV +DEYDV FD KQPLGLALEDFG ++GKYRTYVSKTLRGSQAT KGIRIPALVVAVNG+NVEGLPRKMV QLIRD  EGRNGMG+G  + VTFRDP+KFMELL++K+      G EI+TQLAPQT+AR+AQTL VKKT+VPEICQTGA YGDLLE+KY T L DGTFLDATGVSTPGRGGDST+YFVLGEQVAGTVPKGWDLALVGACVGE+R I+TPSVLA+G KGLKR+GIPPDATI+Y+VEVIGINGNN+PR
Sbjct:   75 IRVVMSMSCPDRRGLLEGWASVFLAVGLPHVAQPTQRAHAVKDDEYDVAFDAKQPLGLALEDFG-QNGKYRTYVSKTLRGSQATSKGIRIPALVVAVNGKNVEGLPRKMVVQLIRDAQEGRNGMGEGSSLMVTFRDPAKFMELLSEKSTPGGGEGAEISTQLAPQTQAREAQTLTVKKTYVPEICQTGAKYGDLLEIKYATRLEDGTFLDATGVSTPGRGGDSTLYFVLGEQVAGTVPKGWDLALVGACVGEKRRIKTPSVLAFGAKGLKRKGIPPDATIVYDVEVIGINGNNIPR 369          
BLAST of NO08G03000 vs. NCBI_GenBank
Match: KOO26442.1 (fk506 binding-like protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 178.3 bits (451), Expect = 3.900e-41
Identity = 109/266 (40.98%), Postives = 152/266 (57.14%), Query Frame = 0
Query:   89 NDEYDVTFDVKQPLGLALED------FGNRDGKYRTYVSKTLRGSQATGKG-IRIPALVVAVNGQNVEGLPRKMV-AQLIRDTIEGRNGMGKGGVVTVTFRDPSKFMELLND------KTAAPGDEITTQLAP--QTKARDAQTLAVKKTFVPEICQTGAMYGDLLEVKYTTSLADGTFLDATGVSTPGRGGDSTVYFVLGEQVAGTVPKGWDLALVGACVGEQRVIRTPSVLAYGNKGLKRRGIPPDATIIYNVEVIGINGNNLP 339
            +DEY + FD  +PLGL L+D      +G R+G  R  V+  + G QA   G ++I  +VVAV+G NVE    K V A+L+R   EGR        V VT +D   F E LND      +  AP   I T++AP         Q L++++  V   C   A  GDL+E++YT  LADGT  D  G+   GR GD ++ FVLG+Q AG  P  WD+ LVG CVGE+R++  P VL +G KGL +R +PP+A ++Y+VE++ IN  + P
Sbjct:  137 SDEYSLEFDSSRPLGLELKDLRVGFEYGTREGSSRVLVANVVAGGQAASTGKVQIDDIVVAVDGVNVERESAKEVSARLVRAKAEGR-------PVQVTLKDALAFNERLNDLPKDREEAMAP---IATRVAPGGGPLGEPEQVLSIRRLEVQSRCTRNAQSGDLVEIRYTGRLADGTVFD--GMELAGRFGDDSLQFVLGKQPAGQFPPAWDVGLVGMCVGERRLLDVPPVLGFGAKGLPKRNVPPNARLLYDVELLAINALSTP 390          
BLAST of NO08G03000 vs. NCBI_GenBank
Match: GAX14353.1 (FK506-binding protein 14 [Fistulifera solaris])

HSP 1 Score: 160.6 bits (405), Expect = 8.500e-36
Identity = 94/261 (36.02%), Postives = 140/261 (53.64%), Query Frame = 0
Query:  102 LGLALEDFGNRDGKYRTYVSKTLRGSQATGKGIRIPALVVAVNGQNVEGLPRKMVAQLIRDTIEGRNGMGKGGVVTVTFRDPSKFMELLNDKTAAPGDEITTQLAP-----------------QTKARDAQTLAVKKTFVPEICQTGAMYGDLLEVKY------TTSLADGTFLDATGVSTPGRGGDSTVYFVLGEQVAGTVPKGWDLALVGACVGEQRVIRTPSVLAYGNKGLKRRGIPPDATIIYNVEVIGINGNNLPR 340
            +GL L D   +    R YV     GS A+  GI+   +V+ +NGQ+ E    + VA ++   +       KG  V + FRDP+ F   L  +  +P + +TTQ+AP                 +  ++D Q + V +   P++C  GA   DLLE+ Y      T ++ DG+ +   G   PGRG D +++FVLG+Q  G  P GWD+ LVG CVGE+R +  P  LAYG+ GL RRGIPPDAT+ Y+V ++ +NG + P+
Sbjct:   98 IGLELADLDFKT-NLRVYVKSIQMGSLASEVGIQQNWVVIGLNGQSTERTNAEGVAMMLSQALN-----DKGDYVELRFRDPAVFRNKL--QNLSPDESVTTQVAPAGDTTQRNQDGSVQKGRKVTSQDDQKVTVSQLIPPKMCTRGAQVDDLLEISYIGTVVETGAIFDGSAVKINGQGIPGRGDDVSLFFVLGKQPFGQFPPGWDVGLVGCCVGERRRLLIPPALAYGSTGLPRRGIPPDATLQYDVTLVSLNGLSTPQ 350          
BLAST of NO08G03000 vs. NCBI_GenBank
Match: GAX09832.1 (FK506-binding protein 14 [Fistulifera solaris])

HSP 1 Score: 154.8 bits (390), Expect = 4.700e-34
Identity = 115/352 (32.67%), Postives = 172/352 (48.86%), Query Frame = 0
Query:   17 RPLLLMLLLITLTHALVVQLPTLRNRRNALMRMTVASSSNDRKGHLQSLASILLGAALSSPPPSLRQALAVGNDEYDVTFDV------KQPLGLALEDFGNRDGKYRTYVSKTLRGSQATGKGIRIPALVVAVNGQNVEGLPRKMVAQLIRDTIEGRNGMGKGGVVTVTFRDPSKFMELLNDKTAAPGDEITTQLAP-----------------QTKARDAQTLAVKKTFVPEICQTGAMYGDLLEVKY------TTSLADGTFLDATGVSTPGRGGDSTVYFVLGEQVAGTVPKGWDLALVGACVGEQRVIRTPSVLAYGNKGLKRRGIPPDATIIYNVEVIGINGNNLPR 340
            R LLL+L      ++L V      +RR  L++ TVA  +        +  +    +   S   +  +  A  +   +VT  V      ++ LGL L D   +    R YV     GS A+  GI+   +VV +NGQ+ E    + VA L+ + +       K   V + FRDP+ F   L +      + +TTQ+AP                    A+D Q + V +   P++C  GA   DLLE+ Y      T ++ DG+ +   G   PGRG D +++FVLG+Q  G  P GWD+ LVG CVGE+R +  P  LAYG+KGL RRGIPPDAT+ Y+V ++ +NG + P+
Sbjct:    6 RALLLLLWYRLAANSLSVPEGMTTHRRAFLLQSTVALLTPSAGVAAVTDETNAFASTWWSQDAAATKVTAPTDASDEVTLRVSKEQIRQRRLGLELADLDFKT-NLRVYVKSVQMGSLASEVGIQQNWVVVGLNGQSTERTNAEGVAVLLSEALN-----DKRDYVELRFRDPAVFRNKLQNLNV--NESVTTQVAPAGDTTQRNQDGSVQKGRTVTAQDDQKVTVSQLMPPKMCTRGAQVDDLLEISYIGTVVETGAIFDGSAVKINGQGIPGRGDDVSLFFVLGKQPFGQFPPGWDVGLVGCCVGERRRLLIPPALAYGSKGLPRRGIPPDATLQYDVTLVSLNGLSTPQ 349          
BLAST of NO08G03000 vs. NCBI_GenBank
Match: CBN77433.1 (FK506-binding protein 2 precursor [Ectocarpus siliculosus])

HSP 1 Score: 146.4 bits (368), Expect = 1.700e-31
Identity = 97/298 (32.55%), Postives = 155/298 (52.01%), Query Frame = 0
Query:   63 QSLASILLGAALSSPPPSLRQALAVGNDEYDVTFDVKQPLGLALEDFGNRDGKYRTYVSKTLRGSQAT-GKGIRIPALVVAVNGQNVEGLPRKMVAQLIRDTIEGRNGMGKGGVVTVTFRDPSKFMELLND-KTAAPGDE-------------ITTQLAPQTKARDAQTLAV---KKTFVPEICQTGAMYGDLLEVKYTTSLADGTFLDAT-----GVSTPGRGGDSTVYFVLGEQVAGTVPKGWDLALVGACVGEQRVIRTPSVLAYGNKGLKRRGIPPDATIIYNVEVIGINGNNL 338
            Q L  + +G   +   P   +AL   +DE++  FD    +G+ LED   + G  R  V + + GS A     I+   ++V+ NG ++E        ++I+ +            +T+  RD S F +LL      +P +E             I+T+++P+   R+ Q + +    K+     C  GA  GDLLE++YT  L DG   D +     G    GR GD+T++FVLG+Q  G  P GWDL L+G CVGE R+I  P +L YG +G+ +RG+P +AT++Y+V++IG+NG N+
Sbjct:   67 QVLGGLGIGIVSTLLEPDASRALE--SDEFEEVFD-DDAIGIELEDVKYK-GSSRVLVKRVVPGSAAARHPRIKADLVLVSANGVDLERQSATAAKKIIKTS---------SRPLTLVLRDNSLFQQLLKPAPPTSPDNEATGVAVTNGGFEPISTKVSPEGNGREEQVVKLLNSDKSAECNSCGQGARRGDLLEIEYTAKLEDGKVFDGSSIKVNGREVVGRAGDTTLFFVLGKQPKGQFPPGWDLLLIGMCVGETRLISVPPLLGYGAQGMPKRGVPANATLLYDVKLIGVNGVNM 351          
BLAST of NO08G03000 vs. NCBI_GenBank
Match: XP_005819976.1 (hypothetical protein GUITHDRAFT_120829 [Guillardia theta CCMP2712] >EKX32996.1 hypothetical protein GUITHDRAFT_120829 [Guillardia theta CCMP2712])

HSP 1 Score: 125.9 bits (315), Expect = 2.300e-25
Identity = 93/271 (34.32%), Postives = 142/271 (52.40%), Query Frame = 0
Query:   87 VGNDEYDVTFDVKQPLGLALEDFGNRDG------KYRTYVSKTLRGSQA----TGKGIRIPALVVAVNGQNVEGLPRKMVAQLIRDTIEGRNGMGKGGVVTVTFRDPSKFME-LLNDKTAAPGDEITTQLAPQTKARDAQTLAVKKTFVPEIC-QTGAMYGDLLEVKYTTSLADG-TFLDATGVSTPGR-GGDSTVYFVLGEQVAGTVPKGWDLALVGACVGEQRVIRTPSVLAYGNKGLKRRGI------PPDATIIYNVEVIGINGNNL 338
            +G+DE+ + F  + PLG+ L +     G        R  V     G QA      K +R   LVV++NG+N+EG+      +L+R+  E +        + + FRDP  F E LLN K    G  ++TQ+  Q+    ++ L VK   +PE C    A  GD+LEVKYT  LAD     D + ++  G   GD ++YFVL  Q     P+ W++ L+G C+GE+R +  P  L YG +G+ +  I      PP+A +IY+V+++GING N+
Sbjct:   58 LGDDEFSIDFG-QGPLGMDLIEVRFPQGVPREKQSSRIIVDAVKAGGQAETLGKAKRLRPQVLVVSINGKNIEGMRASDALKLLRE--EKKKSDENNQALQIVFRDPLIFKEKLLNIK---EGGAVSTQVGVQS----SEELVVKTLKMPEDCGAVRAQQGDVLEVKYTGYLADTMEVFDGSSINQNGNFFGDQSLYFVL-NQGQRQAPRAWEVGLLGMCIGEERRLVVPPSLGYGREGVPKGKIVPKLPVPPNAKLIYDVKLVGINGINV 317          
BLAST of NO08G03000 vs. NCBI_GenBank
Match: XP_002177322.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC51785.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 124.4 bits (311), Expect = 6.700e-25
Identity = 58/131 (44.27%), Postives = 84/131 (64.12%), Query Frame = 0
Query:  215 QTLAVKKTFVPEICQTGAMYGDLLEVKY------TTSLADGTFLDATGVSTPGRGGDSTVYFVLGEQVAGTVPKGWDLALVGACVGEQRVIRTPSVLAYGNKGLKRRGIPPDATIIYNVEVIGINGNNLPR 340
            Q + V +   P++C+ GA   DLLE+ Y      T  + DG+ +   G   PGRG D ++YFVLG+Q  G  P GWD+ +VG CVGE+R +  P  LAYG+KG+ RRGIPPDAT+ Y++ ++ +NG + P+
Sbjct:    7 QQITVSQLIPPKLCKRGATTDDLLEISYRGSVVETGQVFDGSAIKIDGGGIPGRGDDVSLYFVLGKQPFGQFPPGWDVGMVGQCVGERRRLIIPPALAYGSKGVPRRGIPPDATLQYDITLVSLNGFSTPQ 137          
BLAST of NO08G03000 vs. NCBI_GenBank
Match: EJK66587.1 (hypothetical protein THAOC_12486 [Thalassiosira oceanica])

HSP 1 Score: 122.1 bits (305), Expect = 3.300e-24
Identity = 82/267 (30.71%), Postives = 129/267 (48.31%), Query Frame = 0
Query:  102 LGLALEDFGNRDGKYRTYVSKTLRGSQATGKGIRIPALVVAVNGQNVEGLPRKMVAQLIRDTIEG-RNGMGKGGVVTVTFRDPSKF---MELLNDKTAAPGD--EITTQLAP-----------------QTKARDAQTLAVKKTFVPEICQTGAMYGDLLEVKY------TTSLADGTFLDATGVSTPGRGGDSTVYFVLGEQVAGTVPKGWDLALVGACVGEQRVIRTPSVLAYGNKGLKRRGIPPDATIIYNVEVIGINGNNLPR 340
            +GL L +   R   +R  +      S A   GI+   +VV++ G N E       A      ++   +       +++TFRDP+KF   +E    K  + G+   ++T++AP                   + +  Q + V +   P++C   A   DL+E+ Y      T  + DG+ +   G   PGRG D +VYFVLG+Q  G  P GWD+ L G CVGE+R +  P VL +G +G  RR IPP+AT+ Y+V ++ +NG   P+
Sbjct:  138 IGLELGEVSFRT-NFRVIIKSVAPNSLAQKLGIQPNWVVVSIGGANGERTNAAGAAIYFSQAVKKVLSSPDDSTTLSITFRDPAKFRDELESFPSKDTSSGELPTVSTKVAPAGDTTQRFEDGSLRRGATVREQGDQVVTVTQLVPPQMCNRRATTDDLVEISYLGQIVETGEIFDGSAVKINGNGIPGRGNDISVYFVLGKQPFGQFPPGWDVGLNGMCVGERRRLIIPPVLGFGAEGNPRRRIPPNATLQYDVTLVSLNGLATPQ 403          
BLAST of NO08G03000 vs. NCBI_GenBank
Match: OEU16508.1 (peptidyl-prolyl cis-trans isomerase, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 120.2 bits (300), Expect = 1.300e-23
Identity = 58/134 (43.28%), Postives = 83/134 (61.94%), Query Frame = 0
Query:  212 RDAQTLAVKKTFVPEICQTGAMYGDLLEVKY------TTSLADGTFLDATGVSTPGRGGDSTVYFVLGEQVAGTVPKGWDLALVGACVGEQRVIRTPSVLAYGNKGLKRRGIPPDATIIYNVEVIGINGNNLPR 340
            +D Q ++V +   P++C+ G+   DL+E+ Y      T ++ DG+ +   G   PGRG D ++ FVLG+Q  G  P GWD+ L   CVGE+R I  P VLAYG KGL RRGIP  AT+ Y+V ++ +NG  +PR
Sbjct:    3 QDDQRISVSQLIPPKMCKRGSTLDDLMEISYIGRVVETGNIFDGSAIMVDGEGIPGRGNDVSISFVLGKQPFGQFPPGWDVGLTDMCVGERRRILVPPVLAYGEKGLPRRGIPSQATLQYDVTLVSLNGLAMPR 136          
BLAST of NO08G03000 vs. NCBI_GenBank
Match: XP_009042470.1 (hypothetical protein AURANDRAFT_8208, partial [Aureococcus anophagefferens] >EGB02830.1 hypothetical protein AURANDRAFT_8208, partial [Aureococcus anophagefferens])

HSP 1 Score: 112.8 bits (281), Expect = 2.000e-21
Identity = 58/118 (49.15%), Postives = 72/118 (61.02%), Query Frame = 0
Query:  225 PEICQTGAMYGDLLEVKYTTSL-ADGTFLD------ATGVSTPGRGGDSTVYFVLGEQVAGTVPKGWDLALVGACVGEQRVIRTPSVLAYGNKGLKRRGIPPDATIIYNVEVIGINGN 336
            P +C  GA  GDLLE++Y   L ADG   D      A G    GRGGDSTVYFVLG+Q  G  P  WD AL GACVGE R +  P VL +G+KG  +R +PP A + Y ++++ IN N
Sbjct:    2 PVVCGRGAERGDLLEIRYEGRLAADGRLFDGSAITFAGGNQVAGRGGDSTVYFVLGQQPLGQFPAAWDPALGGACVGEVRRVSVPPVLGFGDKGAPKRNVPPYAMLDYTLQLVSINSN 119          
The following BLAST results are available for this feature:
BLAST of NO08G03000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26709.14.000e-11874.32Peptidyl-prolyl cis-trans isomerase [Nannochlorops... [more]
KOO26442.13.900e-4140.98fk506 binding-like protein [Chrysochromulina sp. C... [more]
GAX14353.18.500e-3636.02FK506-binding protein 14 [Fistulifera solaris][more]
GAX09832.14.700e-3432.67FK506-binding protein 14 [Fistulifera solaris][more]
CBN77433.11.700e-3132.55FK506-binding protein 2 precursor [Ectocarpus sili... [more]
XP_005819976.12.300e-2534.32hypothetical protein GUITHDRAFT_120829 [Guillardia... [more]
XP_002177322.16.700e-2544.27predicted protein, partial [Phaeodactylum tricornu... [more]
EJK66587.13.300e-2430.71hypothetical protein THAOC_12486 [Thalassiosira oc... [more]
OEU16508.11.300e-2343.28peptidyl-prolyl cis-trans isomerase, partial [Frag... [more]
XP_009042470.12.000e-2149.15hypothetical protein AURANDRAFT_8208, partial [Aur... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008729NSK008729Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G03000.1NO08G03000.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582838gene_3631Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100001g208gene3769Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G03000.1NO08G03000.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G03000 ID=NO08G03000|Name=NO08G03000|organism=Nannochloropsis oceanica|type=gene|length=1237bp
ATGTGTCGCGGAGCCGCGACAACCTCCCCAACCCCCAAGCTGTCCCACCG
CCCCCTCCTCCTCATGCTCCTCCTCATCACTCTCACGCACGCCCTTGTCG
TCCAACTACCTACACTTCGCAATCGGCGCAACGCTTTGATGCGCATGACT
GTCGCGTCCTCCTCCAACGATCGCAAGGGCCACCTGCAATCACTGGCCTC
CATCCTGCTTGGCGCCGCTTTATCCAGCCCACCGCCATCCCTCCGACAAG
CACTTGCTGTGGGAAACGACGAGTACGACGTGACCTTTGATGTCAAGCAG
CCATTAGGCCTGGCACTCGAGGATTTTGGCAATCGCGACGGCAAGTATCG
CACTTATGTCAGTAAAACGCTCCGTGGGTCTCAAGCAACGGGCAAGGGAA
TCAGAATTCCCGCGTTGGTTGTGGCGGTAAATGGACAGAATGTTGAGGGA
CTACCCAGGAAAATGGTGGCGCAATTGATTCGAGACACGATTGAAGGACG
GAATGGGATGGGGAAAGGAGGGGTGGTGACCGTGACGTTTCGAGATCCGT
CCAAGTTCATGGAATTACTGgtaagtttgtgacttaagtgtttgtatgcg
agttagtgcttgaattttaaattccatttttctgtgcagtagtgtgatta
gttccctttttctggttgtccgagggctgctttcatctcggccaaaacca
ctcaagcacttacctcaacagatcccccattcccctcctccctccgttcc
ccttccctccctccctcccttcctcacctgacaacagAACGACAAAACAG
CCGCCCCCGGCGACGAAATCACCACGCAACTCGCCCCTCAAACCAAGGCG
CGGGACGCTCAAACCCTTGCGGTCAAGAAAACCTTCGTCCCCGAGATCTG
TCAGACAGGGGCCATGTATGGCGACTTGCTGGAAGTGAAGTACACGACCT
CTCTCGCGGATGGGACATTTTTGGACGCCACTGGTGTCAGCACCCCGGGA
AGAGGGGGCGATTCGACAGTTTATTTTGTGTTGGGTGAGCAAGTGGCGGG
AACGGTGCCAAAGGGGTGGGATCTGGCGTTGGTGGGCGCGTGCGTGGGGG
AGCAGAGGGTGATTCGAACGCCGAGTGTCCTGGCGTACGGGAATAAGGGC
CTCAAAAGACGAGGAATCCCCCCGGATGCGACAATAATTTACAATGTGGA
GGTGATTGGGATCAACGGGAATAATTTGCCCAGATAG
back to top

protein sequence of NO08G03000.1

>NO08G03000.1-protein ID=NO08G03000.1-protein|Name=NO08G03000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=340bp
MCRGAATTSPTPKLSHRPLLLMLLLITLTHALVVQLPTLRNRRNALMRMT
VASSSNDRKGHLQSLASILLGAALSSPPPSLRQALAVGNDEYDVTFDVKQ
PLGLALEDFGNRDGKYRTYVSKTLRGSQATGKGIRIPALVVAVNGQNVEG
LPRKMVAQLIRDTIEGRNGMGKGGVVTVTFRDPSKFMELLNDKTAAPGDE
ITTQLAPQTKARDAQTLAVKKTFVPEICQTGAMYGDLLEVKYTTSLADGT
FLDATGVSTPGRGGDSTVYFVLGEQVAGTVPKGWDLALVGACVGEQRVIR
TPSVLAYGNKGLKRRGIPPDATIIYNVEVIGINGNNLPR*
back to top
Synonyms
Publications