NO08G01860, NO08G01860 (gene) Nannochloropsis oceanica

Overview
NameNO08G01860
Unique NameNO08G01860
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1678
Alignment locationchr8:568311..569988 -

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Properties
Property NameValue
DescriptionPci domain-containing protein 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:568311..569988 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000717PCI_dom
Homology
BLAST of NO08G01860 vs. NCBI_GenBank
Match: XP_023328430.1 (PCI domain-containing protein 2-like isoform X4 [Eurytemora affinis])

HSP 1 Score: 97.1 bits (240), Expect = 9.900e-17
Identity = 80/276 (28.99%), Postives = 129/276 (46.74%), Query Frame = 0
Query:    8 AYLTAVAEASQQADGIALTHLFSYPCLSHRLGHQFARLDVRQAIHNHATLKRVAHVP--QLLEPFLRGAGCLADGELEAAFEHHR---GAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETVR-----LDPIMNEAVKAISDKFRVFGTVTAS----GRRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPR 270
            AYL+ VA A +  DG  L+ L S+   SH      +RL V++     A ++RV   P  +++   LR     A+ E   AF+       +FA      K+  E WLL +M+ +   LR  A + D++  +         + +A + I   FRV      S     ++   L L N+    Y ++N    CKPL        +  +       F ++  VTY +   R ++ D N++EAE +L YAF+ C    K+NK+ IL Y++PVK+ LG +P+
Sbjct:    8 AYLSKVAVAYENYDGFNLSILLSFED-SHIAN---SRLQVQEP---EAAVERVIDQPLDEMVAAHLRACWAWANSEFTEAFKCQEIVVNSFARLLSSCKD--ENWLLPVMQVVCLDLRKFALRADQQKTKGGKNNTGQTLEKASEGIMACFRVCAADARSAEELSKKWGMLNLVNQLFKIYFKVNKLHLCKPLI-------RAIESSAFKDRFKKSQLVTYRYYVGRKYMFDYNFREAEEYLRYAFEKCDQRMKKNKKLILIYLIPVKMLLGQMPK 267          
BLAST of NO08G01860 vs. NCBI_GenBank
Match: XP_023328429.1 (PCI domain-containing protein 2-like isoform X3 [Eurytemora affinis])

HSP 1 Score: 97.1 bits (240), Expect = 9.900e-17
Identity = 80/276 (28.99%), Postives = 129/276 (46.74%), Query Frame = 0
Query:    8 AYLTAVAEASQQADGIALTHLFSYPCLSHRLGHQFARLDVRQAIHNHATLKRVAHVP--QLLEPFLRGAGCLADGELEAAFEHHR---GAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETVR-----LDPIMNEAVKAISDKFRVFGTVTAS----GRRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPR 270
            AYL+ VA A +  DG  L+ L S+   SH      +RL V++     A ++RV   P  +++   LR     A+ E   AF+       +FA      K+  E WLL +M+ +   LR  A + D++  +         + +A + I   FRV      S     ++   L L N+    Y ++N    CKPL        +  +       F ++  VTY +   R ++ D N++EAE +L YAF+ C    K+NK+ IL Y++PVK+ LG +P+
Sbjct:    8 AYLSKVAVAYENYDGFNLSILLSFED-SHIAN---SRLQVQEP---EAAVERVIDQPLDEMVAAHLRACWAWANSEFTEAFKCQEIVVNSFARLLSSCKD--ENWLLPVMQVVCLDLRKFALRADQQKTKGGKNNTGQTLEKASEGIMACFRVCAADARSAEELSKKWGMLNLVNQLFKIYFKVNKLHLCKPLI-------RAIESSAFKDRFKKSQLVTYRYYVGRKYMFDYNFREAEEYLRYAFEKCDQRMKKNKKLILIYLIPVKMLLGQMPK 267          
BLAST of NO08G01860 vs. NCBI_GenBank
Match: XP_023328427.1 (PCI domain-containing protein 2-like isoform X1 [Eurytemora affinis])

HSP 1 Score: 97.1 bits (240), Expect = 9.900e-17
Identity = 80/276 (28.99%), Postives = 129/276 (46.74%), Query Frame = 0
Query:    8 AYLTAVAEASQQADGIALTHLFSYPCLSHRLGHQFARLDVRQAIHNHATLKRVAHVP--QLLEPFLRGAGCLADGELEAAFEHHR---GAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETVR-----LDPIMNEAVKAISDKFRVFGTVTAS----GRRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPR 270
            AYL+ VA A +  DG  L+ L S+   SH      +RL V++     A ++RV   P  +++   LR     A+ E   AF+       +FA      K+  E WLL +M+ +   LR  A + D++  +         + +A + I   FRV      S     ++   L L N+    Y ++N    CKPL        +  +       F ++  VTY +   R ++ D N++EAE +L YAF+ C    K+NK+ IL Y++PVK+ LG +P+
Sbjct:    8 AYLSKVAVAYENYDGFNLSILLSFED-SHIAN---SRLQVQEP---EAAVERVIDQPLDEMVAAHLRACWAWANSEFTEAFKCQEIVVNSFARLLSSCKD--ENWLLPVMQVVCLDLRKFALRADQQKTKGGKNNTGQTLEKASEGIMACFRVCAADARSAEELSKKWGMLNLVNQLFKIYFKVNKLHLCKPLI-------RAIESSAFKDRFKKSQLVTYRYYVGRKYMFDYNFREAEEYLRYAFEKCDQRMKKNKKLILIYLIPVKMLLGQMPK 267          
BLAST of NO08G01860 vs. NCBI_GenBank
Match: NP_648486.1 (PCI domain-containing protein 2 [Drosophila melanogaster] >Q9VTL1.2 RecName: Full=PCI domain-containing protein 2 homolog; Short=dmPCID2; AltName: Full=CSN12-like protein >AAF50037.2 PCI domain-containing protein 2 [Drosophila melanogaster] >AAL13917.1 LD40777p [Drosophila melanogaster] >ACL85642.1 CG7351-PA, partial [synthetic construct] >ACL90492.1 CG7351-PA [synthetic construct])

HSP 1 Score: 96.7 bits (239), Expect = 1.300e-16
Identity = 81/284 (28.52%), Postives = 126/284 (44.37%), Query Frame = 0
Query:    2 VYQQVPAYLTAVAEASQQADGIALTHLFS-----------YPCLSHRLGHQFARLDVRQAIHNHATLKRVAHVPQLLEPFLRGAGCLADGELEAAFEHHRGAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETVRLDP--IMNEAVKAISDKFRVF---GTVTASGRRRVALM-LANEQIICYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLP 269
            ++  V  YL+ V  A+Q  DG +L    S           Y     +L  +F +  + + +  H  LK + H+ Q  EP          G +EA  +      A+   + + + E W L LM ++   LR LAQ  +K      P  ++ +A   I   FRV    G  +    +R+ +M L N+    Y ++N    CKPL        +  D       F   + +TY +   R  + D+NY+ A ++L+YAF +CP     NKR IL Y+VPVK+ LG LP
Sbjct:    1 MFGTVNNYLSGVLHAAQDLDGESLATYLSLRDVHVQNHNLYIAQPEKLVDRFLKPPLDEVVSAH--LKVLYHLAQ--EP---------PGYMEAYTQQSAACGAVVRLLQQLKDENWCLPLMYRVCLDLRYLAQACEKHCQGFTPGHVLEKAADCIMACFRVCAADGRASEEDTKRLGMMNLVNQLFKIYFRINKLHLCKPLI-------RAIDNCIFKDSFPLPEQITYKYFVGRRAMFDSNYQAAVQYLSYAFSNCPDRFASNKRLILIYLVPVKMLLGYLP 264          
BLAST of NO08G01860 vs. NCBI_GenBank
Match: PAN12264.1 (hypothetical protein PAHAL_B02677 [Panicum hallii])

HSP 1 Score: 96.7 bits (239), Expect = 1.300e-16
Identity = 72/270 (26.67%), Postives = 120/270 (44.44%), Query Frame = 0
Query:    3 YQQVPAYLTAVAEASQQADGIALTHLFSYPCLSHRLGHQFARLDVRQAIHNHATL--KRVAHVPQLLEPFLRGAGCLADGELEAAFEHHRGAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETVRLDPIMNEAVKAISDKFRVFGTVTASGRRRVALMLANEQII-CYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPR 270
            ++++  YL+ V +A   +DG AL  LF+       L       D   A  +   L   R  H+  LL P LR     +      A+     A       ++  +  W +  M  +A  +RLLA+K D+E        ++   A S   +VFG +   G +R+  +    Q+   Y +L     C+ +      R   T  +F   +F   D VTY +   RL + + N+  A++ L YA  HC   ++ N R IL +++PVKL++G+LP+
Sbjct:   11 HRRIGDYLSRVVDAISSSDGAALASLFAVSAPGSTL-----LSDALAAFPDFPRLAGDRFPHLADLLVPLLRAIHSHSLQRFADAYSSFEKAANAFLQEFRNWETPWAMEAMHTVALEIRLLAEKADRELAMTGKNPDKLQAAGSFLMKVFGALAVKGPKRIGALYVTCQLFKIYFRLGTVNLCRSV-----IRSIETARNFDFEDFPVKDKVTYMYYTGRLEVFNENFLVADQKLTYALMHCNPQSESNLRRILKFLIPVKLSIGVLPK 270          
BLAST of NO08G01860 vs. NCBI_GenBank
Match: PUZ70602.1 (hypothetical protein GQ55_2G245500 [Panicum hallii var. hallii])

HSP 1 Score: 96.7 bits (239), Expect = 1.300e-16
Identity = 72/270 (26.67%), Postives = 120/270 (44.44%), Query Frame = 0
Query:    3 YQQVPAYLTAVAEASQQADGIALTHLFSYPCLSHRLGHQFARLDVRQAIHNHATL--KRVAHVPQLLEPFLRGAGCLADGELEAAFEHHRGAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETVRLDPIMNEAVKAISDKFRVFGTVTASGRRRVALMLANEQII-CYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPR 270
            ++++  YL+ V +A   +DG AL  LF+       L       D   A  +   L   R  H+  LL P LR     +      A+     A       ++  +  W +  M  +A  +RLLA+K D+E        ++   A S   +VFG +   G +R+  +    Q+   Y +L     C+ +      R   T  +F   +F   D VTY +   RL + + N+  A++ L YA  HC   ++ N R IL +++PVKL++G+LP+
Sbjct:   11 HRRIGDYLSRVVDAISSSDGAALASLFAVSAPDSTL-----LSDALAAFPDFPRLAGDRFPHLADLLVPLLRAIHSHSLQRFADAYSSFEKAANAFLQEFRNWETPWAMEAMHTVALEIRLLAEKADRELAMTGKNPDKLQAAGSFLMKVFGALAVKGPKRIGALYVTCQLFKIYFRLGTVNLCRSV-----IRSIETARNFDFEDFPVKDKVTYMYYTGRLEVFNENFLVADQKLTYALMHCNPQSESNLRRILKFLIPVKLSIGVLPK 270          
BLAST of NO08G01860 vs. NCBI_GenBank
Match: XP_005037538.1 (PREDICTED: PCI domain-containing protein 2 [Ficedula albicollis])

HSP 1 Score: 96.3 bits (238), Expect = 1.700e-16
Identity = 76/285 (26.67%), Postives = 132/285 (46.32%), Query Frame = 0
Query:    1 MVYQQVPAYLTAVAEASQQADGIALTHLFSYPCLSHRLGHQFARLDVRQAIHNHATLKRVAHVP--QLLEPFLRGAGCLADGELEAAFEHHR---GAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETV-----RLDPIMNEAVKAISDKFRVFGTVTASG----RRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPRVR 272
            M +  +  YL  V EA +  DG     L S+        H        Q        ++V   P  ++    LR    +A+ +   A++       +F  A   +KE  E W L +M  +A  LR+ A   D++ V     ++  ++ +A + +   FRV  + T +G    ++   L L N+    Y ++N    CKPL        +  D      E++ A  VTY +   R  + D+++K+AE +L++AF+HC  ++++NKR IL Y++PVK+ LG +P V+
Sbjct:    1 MAHITINQYLQQVQEAIETRDGTFCAELVSFK-------HPHVANPRLQLPSPEEKCQQVLESPYDEMFAAHLRCTYAVANHDFVEAYKCQTVIVQSFLRAFQAHKE--ENWALPIMYSVALDLRIFANNADQQLVKKGKSKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYFKINKLHLCKPLI-------RAIDSSNLKDEYSMAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTVQ 269          
BLAST of NO08G01860 vs. NCBI_GenBank
Match: XP_009274351.1 (PREDICTED: PCI domain-containing protein 2 [Aptenodytes forsteri] >XP_009324550.1 PREDICTED: PCI domain-containing protein 2 [Pygoscelis adeliae] >XP_009481051.1 PREDICTED: PCI domain-containing protein 2 [Pelecanus crispus] >XP_009470898.1 PREDICTED: PCI domain-containing protein 2 [Nipponia nippon] >XP_009584829.1 PREDICTED: PCI domain-containing protein 2 [Fulmarus glacialis] >XP_009819118.1 PREDICTED: PCI domain-containing protein 2 [Gavia stellata] >XP_009702101.1 PREDICTED: PCI domain-containing protein 2 [Cariama cristata] >XP_009924388.1 PREDICTED: PCI domain-containing protein 2 [Haliaeetus albicilla] >XP_009924389.1 PREDICTED: PCI domain-containing protein 2 [Haliaeetus albicilla] >XP_009959106.1 PREDICTED: PCI domain-containing protein 2 [Leptosomus discolor] >XP_010292547.1 PREDICTED: PCI domain-containing protein 2 [Phaethon lepturus] >XP_010305210.1 PREDICTED: PCI domain-containing protein 2 [Balearica regulorum gibbericeps] >XP_010573937.1 PREDICTED: PCI domain-containing protein 2 [Haliaeetus leucocephalus] >XP_010573938.1 PREDICTED: PCI domain-containing protein 2 [Haliaeetus leucocephalus] >XP_011581812.1 PREDICTED: PCI domain-containing protein 2 [Aquila chrysaetos canadensis] >XP_014799671.1 PREDICTED: PCI domain-containing protein 2 [Calidris pugnax] >XP_014799672.1 PREDICTED: PCI domain-containing protein 2 [Calidris pugnax])

HSP 1 Score: 96.3 bits (238), Expect = 1.700e-16
Identity = 65/238 (27.31%), Postives = 115/238 (48.32%), Query Frame = 0
Query:   43 ARLDVRQAIHNHATLKRVAHVPQLLEPFLRGAGCLADGELEAAFEHHRGAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETV-----RLDPIMNEAVKAISDKFRVFGTVTASG----RRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPRVR 272
            A L    A+ NH  ++       +++ FLR            AF+ H+             +E W L +M  +A  LR+ A   D++ V     ++  ++ +A + +   FRV  + T +G    ++   L L N+    Y ++N    CKPL        +  D      E++ A  VTY +   R  + D+++K+AE +L++AF+HC  ++++NKR IL Y++PVK+ LG +P V+
Sbjct:   64 AHLRCTYAVGNHDFIEAYKCQTVIVQSFLR------------AFQAHK-------------EENWALPIMYAVALDLRIFANNADQQLVKKGKSKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYFKINKLHLCKPLI-------RAIDSSNLKDEYSMAQRVTYRYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTVQ 269          
BLAST of NO08G01860 vs. NCBI_GenBank
Match: XP_009511433.1 (PREDICTED: LOW QUALITY PROTEIN: PCI domain-containing protein 2 [Phalacrocorax carbo])

HSP 1 Score: 96.3 bits (238), Expect = 1.700e-16
Identity = 65/238 (27.31%), Postives = 115/238 (48.32%), Query Frame = 0
Query:   43 ARLDVRQAIHNHATLKRVAHVPQLLEPFLRGAGCLADGELEAAFEHHRGAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETV-----RLDPIMNEAVKAISDKFRVFGTVTASG----RRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPRVR 272
            A L    A+ NH  ++       +++ FLR            AF+ H+             +E W L +M  +A  LR+ A   D++ V     ++  ++ +A + +   FRV  + T +G    ++   L L N+    Y ++N    CKPL        +  D      E++ A  VTY +   R  + D+++K+AE +L++AF+HC  ++++NKR IL Y++PVK+ LG +P V+
Sbjct:   64 AHLRCTYAVGNHDFIEAYKCQTVIVQSFLR------------AFQAHK-------------EENWALPIMYAVALDLRIFANNADQQLVKKGKSKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYFKINKLHLCKPLI-------RAIDSSNLKDEYSMAQRVTYRYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTVQ 269          
BLAST of NO08G01860 vs. NCBI_GenBank
Match: XP_009556173.1 (PREDICTED: PCI domain-containing protein 2 [Cuculus canorus])

HSP 1 Score: 96.3 bits (238), Expect = 1.700e-16
Identity = 64/238 (26.89%), Postives = 116/238 (48.74%), Query Frame = 0
Query:   43 ARLDVRQAIHNHATLKRVAHVPQLLEPFLRGAGCLADGELEAAFEHHRGAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETV-----RLDPIMNEAVKAISDKFRVFGTVTASG----RRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPRVR 272
            A L    A+ NH  ++   +   L++ FLR            AF+ H+             +E W L +M  +A  LR+ A   D++ V     ++  ++ +A + +   FRV  + T +G    ++   L L N+    Y ++N    CKPL        +  D      +++ A  VTY +   R  + D+++K+AE +L++AF+HC  ++++NKR IL Y++PVK+ LG +P ++
Sbjct:   64 AHLRCIYAVGNHDFIEAYKYQTVLVQSFLR------------AFQAHK-------------EENWALPIMYAVALDLRVFANNADQQLVKKGKGKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYFKINKLHLCKPLI-------RAIDSSNLKDDYSMAQRVTYRYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTIQ 269          
The following BLAST results are available for this feature:
BLAST of NO08G01860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_023328430.19.900e-1728.99PCI domain-containing protein 2-like isoform X4 [E... [more]
XP_023328429.19.900e-1728.99PCI domain-containing protein 2-like isoform X3 [E... [more]
XP_023328427.19.900e-1728.99PCI domain-containing protein 2-like isoform X1 [E... [more]
NP_648486.11.300e-1628.52PCI domain-containing protein 2 [Drosophila melano... [more]
PAN12264.11.300e-1626.67hypothetical protein PAHAL_B02677 [Panicum hallii][more]
PUZ70602.11.300e-1626.67hypothetical protein GQ55_2G245500 [Panicum hallii... [more]
XP_005037538.11.700e-1626.67PREDICTED: PCI domain-containing protein 2 [Ficedu... [more]
XP_009274351.11.700e-1627.31PREDICTED: PCI domain-containing protein 2 [Apteno... [more]
XP_009511433.11.700e-1627.31PREDICTED: LOW QUALITY PROTEIN: PCI domain-contain... [more]
XP_009556173.11.700e-1626.89PREDICTED: PCI domain-containing protein 2 [Cuculu... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL106nonsL106Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR139ngnoR139Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008868NSK008868Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G01860.2NO08G01860.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO08G01860.1NO08G01860.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582435gene_3515Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100001g73gene3887Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G01860.2NO08G01860.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO08G01860.1NO08G01860.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G01860 ID=NO08G01860|Name=NO08G01860|organism=Nannochloropsis oceanica|type=gene|length=1678bp
CAACCACCACTCTCACACCTCACCGCGCACCAAACCAAGGCACAGGGAAA
AAAATGGTATATCAGCAGGTCCCCGCATACCTGACAGCCGTGGCCGAAGC
TTCCCAACAAGCCGATGGCATTGCCTTAACGCACCTCTTCTCCTATCCCT
GTCTCTCCCATCGCCTAGGGCACCAGTTTGCCCGCCTGGACGTCCGACAA
GCCATCCACAACCACGCAACACTCAAACGGGTCGCTCATGTACCACAACT
TCTCGAGCCGTTCTTACGGGGGGCGGGCTGCTTGGCAGACGGCGAACTCG
AGGCAGCCTTCGAGCATCATCGGGGCGCGTTCGCCATGGCTTGTGGGATG
TACAAGGAGCAGCAAGAAGAGTGGTTGCTCAACCTTATGCGGAAGCTGGC
GCGAGGGCTGCGGCTATTGGCACAAAAGGTGGATAAGGAAACAGTGCGGC
TGGACCCCATAATGAACGAGGCCGTCAAGGCCATCTCAGACAAGTTCCGT
GTTTTTGGCACGGTCACAGCTAGTGGACGTCGACGGGTAGCCCTGATGCT
TGCGAACGAGCAGATTATTTGCTACCTCCAATTAAACAACCCACGGCAAT
GCAAGCCATTGACTGATTGGGCCGATGCCCGACATAAGCTGACGGACGAG
GATTTCACCTCGGGAGAGTTTGCACAGGCGGATGCTGTGACATATCATTT
CTTGCGGGCCCGTCTCTTTTTGCTCGACACGAATTATAAGGAGGCGGAGA
GGTTTTTGGCATATGCCTTCAAGCATTGTCCTGTGGCAGCGAAGAGGAAT
AAGCGGACGATTTTGTCGTACATGGTGCCAGTAAAACTTAATTTGGGGTT
GCTACCGCGGgtacgacggagggtggagggaatgcggggtagagggaggg
agagagggaggactgggagaggtggttgagctttcatttttgtccgtcaa
gataagtgcgggatttctcttctccttgtcctctaaatcacctttctccc
ccaacaatttctcgaagCGCGGCCTCCTGGAGCGTTTCCAGCTCAAGGAG
TTCGAGTCGTTGGTGGCTGCCCTGCGGGACGGGGACTTCCGCCTGTATCA
GCAAGAGCTAGATCGATACCAAGACGAGTTTATCGCACGCGGCGTTTACA
TCATTTTAGAGAAGCTCAAGTTGTTCGTGTATCGGAACTTCTTCAAGAAG
ATgtcagtacatggggatggagagagggagggagggagggagggggggcc
cgcaagagaggaaggacttctactacttgaggcttgcaattagctatgcc
atttcttccttctgttgatcaggctgtcatcatgaatactcacaatctcc
aaacgctcacatcactcaacggaaccaacagCTGGGTGCTTAAAGGCAAG
GAGTCAAGGCTCTCGATCGACCTCGTCTTTCAGCTGCACCAAGCGATAGA
TCCCGCTGCGGACGTGGACATTGACGAAATTGAGTGTTTGCTCGCCAACT
TGATCTTCAAAGGGAATATTCGAGGGTATATTGCTCACGAAAAGCGCATT
TTGGTGCTGTCGAAGGACAATCCTTTCCCGTATCCGCAACAAAAGTAGGG
AAAAGGAAGGAGGGTGCAAGGTGGGCATGTATAGCTAACAAAGATATAAA
AGCGCGAGGGAAAATAGGCAATGGTTGA
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protein sequence of NO08G01860.2

>NO08G01860.2-protein ID=NO08G01860.2-protein|Name=NO08G01860.2|organism=Nannochloropsis oceanica|type=polypeptide|length=292bp
MVYQQVPAYLTAVAEASQQADGIALTHLFSYPCLSHRLGHQFARLDVRQA
IHNHATLKRVAHVPQLLEPFLRGAGCLADGELEAAFEHHRGAFAMACGMY
KEQQEEWLLNLMRKLARGLRLLAQKVDKETVRLDPIMNEAVKAISDKFRV
FGTVTASGRRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDED
FTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNK
RTILSYMVPVKLNLGLLPRVRRRVEGMRGRGRERGRTGRGG*
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protein sequence of NO08G01860.1

>NO08G01860.1-protein ID=NO08G01860.1-protein|Name=NO08G01860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=403bp
MVYQQVPAYLTAVAEASQQADGIALTHLFSYPCLSHRLGHQFARLDVRQA
IHNHATLKRVAHVPQLLEPFLRGAGCLADGELEAAFEHHRGAFAMACGMY
KEQQEEWLLNLMRKLARGLRLLAQKVDKETVRLDPIMNEAVKAISDKFRV
FGTVTASGRRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDED
FTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNK
RTILSYMVPVKLNLGLLPRRGLLERFQLKEFESLVAALRDGDFRLYQQEL
DRYQDEFIARGVYIILEKLKLFVYRNFFKKIWVLKGKESRLSIDLVFQLH
QAIDPAADVDIDEIECLLANLIFKGNIRGYIAHEKRILVLSKDNPFPYPQ
QK*
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Synonyms
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