NO08G01860, NO08G01860 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G01860 vs. NCBI_GenBank
Match: XP_023328430.1 (PCI domain-containing protein 2-like isoform X4 [Eurytemora affinis]) HSP 1 Score: 97.1 bits (240), Expect = 9.900e-17 Identity = 80/276 (28.99%), Postives = 129/276 (46.74%), Query Frame = 0 Query: 8 AYLTAVAEASQQADGIALTHLFSYPCLSHRLGHQFARLDVRQAIHNHATLKRVAHVP--QLLEPFLRGAGCLADGELEAAFEHHR---GAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETVR-----LDPIMNEAVKAISDKFRVFGTVTAS----GRRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPR 270 AYL+ VA A + DG L+ L S+ SH +RL V++ A ++RV P +++ LR A+ E AF+ +FA K+ E WLL +M+ + LR A + D++ + + +A + I FRV S ++ L L N+ Y ++N CKPL + + F ++ VTY + R ++ D N++EAE +L YAF+ C K+NK+ IL Y++PVK+ LG +P+ Sbjct: 8 AYLSKVAVAYENYDGFNLSILLSFED-SHIAN---SRLQVQEP---EAAVERVIDQPLDEMVAAHLRACWAWANSEFTEAFKCQEIVVNSFARLLSSCKD--ENWLLPVMQVVCLDLRKFALRADQQKTKGGKNNTGQTLEKASEGIMACFRVCAADARSAEELSKKWGMLNLVNQLFKIYFKVNKLHLCKPLI-------RAIESSAFKDRFKKSQLVTYRYYVGRKYMFDYNFREAEEYLRYAFEKCDQRMKKNKKLILIYLIPVKMLLGQMPK 267
BLAST of NO08G01860 vs. NCBI_GenBank
Match: XP_023328429.1 (PCI domain-containing protein 2-like isoform X3 [Eurytemora affinis]) HSP 1 Score: 97.1 bits (240), Expect = 9.900e-17 Identity = 80/276 (28.99%), Postives = 129/276 (46.74%), Query Frame = 0 Query: 8 AYLTAVAEASQQADGIALTHLFSYPCLSHRLGHQFARLDVRQAIHNHATLKRVAHVP--QLLEPFLRGAGCLADGELEAAFEHHR---GAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETVR-----LDPIMNEAVKAISDKFRVFGTVTAS----GRRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPR 270 AYL+ VA A + DG L+ L S+ SH +RL V++ A ++RV P +++ LR A+ E AF+ +FA K+ E WLL +M+ + LR A + D++ + + +A + I FRV S ++ L L N+ Y ++N CKPL + + F ++ VTY + R ++ D N++EAE +L YAF+ C K+NK+ IL Y++PVK+ LG +P+ Sbjct: 8 AYLSKVAVAYENYDGFNLSILLSFED-SHIAN---SRLQVQEP---EAAVERVIDQPLDEMVAAHLRACWAWANSEFTEAFKCQEIVVNSFARLLSSCKD--ENWLLPVMQVVCLDLRKFALRADQQKTKGGKNNTGQTLEKASEGIMACFRVCAADARSAEELSKKWGMLNLVNQLFKIYFKVNKLHLCKPLI-------RAIESSAFKDRFKKSQLVTYRYYVGRKYMFDYNFREAEEYLRYAFEKCDQRMKKNKKLILIYLIPVKMLLGQMPK 267
BLAST of NO08G01860 vs. NCBI_GenBank
Match: XP_023328427.1 (PCI domain-containing protein 2-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 97.1 bits (240), Expect = 9.900e-17 Identity = 80/276 (28.99%), Postives = 129/276 (46.74%), Query Frame = 0 Query: 8 AYLTAVAEASQQADGIALTHLFSYPCLSHRLGHQFARLDVRQAIHNHATLKRVAHVP--QLLEPFLRGAGCLADGELEAAFEHHR---GAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETVR-----LDPIMNEAVKAISDKFRVFGTVTAS----GRRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPR 270 AYL+ VA A + DG L+ L S+ SH +RL V++ A ++RV P +++ LR A+ E AF+ +FA K+ E WLL +M+ + LR A + D++ + + +A + I FRV S ++ L L N+ Y ++N CKPL + + F ++ VTY + R ++ D N++EAE +L YAF+ C K+NK+ IL Y++PVK+ LG +P+ Sbjct: 8 AYLSKVAVAYENYDGFNLSILLSFED-SHIAN---SRLQVQEP---EAAVERVIDQPLDEMVAAHLRACWAWANSEFTEAFKCQEIVVNSFARLLSSCKD--ENWLLPVMQVVCLDLRKFALRADQQKTKGGKNNTGQTLEKASEGIMACFRVCAADARSAEELSKKWGMLNLVNQLFKIYFKVNKLHLCKPLI-------RAIESSAFKDRFKKSQLVTYRYYVGRKYMFDYNFREAEEYLRYAFEKCDQRMKKNKKLILIYLIPVKMLLGQMPK 267
BLAST of NO08G01860 vs. NCBI_GenBank
Match: NP_648486.1 (PCI domain-containing protein 2 [Drosophila melanogaster] >Q9VTL1.2 RecName: Full=PCI domain-containing protein 2 homolog; Short=dmPCID2; AltName: Full=CSN12-like protein >AAF50037.2 PCI domain-containing protein 2 [Drosophila melanogaster] >AAL13917.1 LD40777p [Drosophila melanogaster] >ACL85642.1 CG7351-PA, partial [synthetic construct] >ACL90492.1 CG7351-PA [synthetic construct]) HSP 1 Score: 96.7 bits (239), Expect = 1.300e-16 Identity = 81/284 (28.52%), Postives = 126/284 (44.37%), Query Frame = 0 Query: 2 VYQQVPAYLTAVAEASQQADGIALTHLFS-----------YPCLSHRLGHQFARLDVRQAIHNHATLKRVAHVPQLLEPFLRGAGCLADGELEAAFEHHRGAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETVRLDP--IMNEAVKAISDKFRVF---GTVTASGRRRVALM-LANEQIICYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLP 269 ++ V YL+ V A+Q DG +L S Y +L +F + + + + H LK + H+ Q EP G +EA + A+ + + + E W L LM ++ LR LAQ +K P ++ +A I FRV G + +R+ +M L N+ Y ++N CKPL + D F + +TY + R + D+NY+ A ++L+YAF +CP NKR IL Y+VPVK+ LG LP Sbjct: 1 MFGTVNNYLSGVLHAAQDLDGESLATYLSLRDVHVQNHNLYIAQPEKLVDRFLKPPLDEVVSAH--LKVLYHLAQ--EP---------PGYMEAYTQQSAACGAVVRLLQQLKDENWCLPLMYRVCLDLRYLAQACEKHCQGFTPGHVLEKAADCIMACFRVCAADGRASEEDTKRLGMMNLVNQLFKIYFRINKLHLCKPLI-------RAIDNCIFKDSFPLPEQITYKYFVGRRAMFDSNYQAAVQYLSYAFSNCPDRFASNKRLILIYLVPVKMLLGYLP 264
BLAST of NO08G01860 vs. NCBI_GenBank
Match: PAN12264.1 (hypothetical protein PAHAL_B02677 [Panicum hallii]) HSP 1 Score: 96.7 bits (239), Expect = 1.300e-16 Identity = 72/270 (26.67%), Postives = 120/270 (44.44%), Query Frame = 0 Query: 3 YQQVPAYLTAVAEASQQADGIALTHLFSYPCLSHRLGHQFARLDVRQAIHNHATL--KRVAHVPQLLEPFLRGAGCLADGELEAAFEHHRGAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETVRLDPIMNEAVKAISDKFRVFGTVTASGRRRVALMLANEQII-CYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPR 270 ++++ YL+ V +A +DG AL LF+ L D A + L R H+ LL P LR + A+ A ++ + W + M +A +RLLA+K D+E ++ A S +VFG + G +R+ + Q+ Y +L C+ + R T +F +F D VTY + RL + + N+ A++ L YA HC ++ N R IL +++PVKL++G+LP+ Sbjct: 11 HRRIGDYLSRVVDAISSSDGAALASLFAVSAPGSTL-----LSDALAAFPDFPRLAGDRFPHLADLLVPLLRAIHSHSLQRFADAYSSFEKAANAFLQEFRNWETPWAMEAMHTVALEIRLLAEKADRELAMTGKNPDKLQAAGSFLMKVFGALAVKGPKRIGALYVTCQLFKIYFRLGTVNLCRSV-----IRSIETARNFDFEDFPVKDKVTYMYYTGRLEVFNENFLVADQKLTYALMHCNPQSESNLRRILKFLIPVKLSIGVLPK 270
BLAST of NO08G01860 vs. NCBI_GenBank
Match: PUZ70602.1 (hypothetical protein GQ55_2G245500 [Panicum hallii var. hallii]) HSP 1 Score: 96.7 bits (239), Expect = 1.300e-16 Identity = 72/270 (26.67%), Postives = 120/270 (44.44%), Query Frame = 0 Query: 3 YQQVPAYLTAVAEASQQADGIALTHLFSYPCLSHRLGHQFARLDVRQAIHNHATL--KRVAHVPQLLEPFLRGAGCLADGELEAAFEHHRGAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETVRLDPIMNEAVKAISDKFRVFGTVTASGRRRVALMLANEQII-CYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPR 270 ++++ YL+ V +A +DG AL LF+ L D A + L R H+ LL P LR + A+ A ++ + W + M +A +RLLA+K D+E ++ A S +VFG + G +R+ + Q+ Y +L C+ + R T +F +F D VTY + RL + + N+ A++ L YA HC ++ N R IL +++PVKL++G+LP+ Sbjct: 11 HRRIGDYLSRVVDAISSSDGAALASLFAVSAPDSTL-----LSDALAAFPDFPRLAGDRFPHLADLLVPLLRAIHSHSLQRFADAYSSFEKAANAFLQEFRNWETPWAMEAMHTVALEIRLLAEKADRELAMTGKNPDKLQAAGSFLMKVFGALAVKGPKRIGALYVTCQLFKIYFRLGTVNLCRSV-----IRSIETARNFDFEDFPVKDKVTYMYYTGRLEVFNENFLVADQKLTYALMHCNPQSESNLRRILKFLIPVKLSIGVLPK 270
BLAST of NO08G01860 vs. NCBI_GenBank
Match: XP_005037538.1 (PREDICTED: PCI domain-containing protein 2 [Ficedula albicollis]) HSP 1 Score: 96.3 bits (238), Expect = 1.700e-16 Identity = 76/285 (26.67%), Postives = 132/285 (46.32%), Query Frame = 0 Query: 1 MVYQQVPAYLTAVAEASQQADGIALTHLFSYPCLSHRLGHQFARLDVRQAIHNHATLKRVAHVP--QLLEPFLRGAGCLADGELEAAFEHHR---GAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETV-----RLDPIMNEAVKAISDKFRVFGTVTASG----RRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPRVR 272 M + + YL V EA + DG L S+ H Q ++V P ++ LR +A+ + A++ +F A +KE E W L +M +A LR+ A D++ V ++ ++ +A + + FRV + T +G ++ L L N+ Y ++N CKPL + D E++ A VTY + R + D+++K+AE +L++AF+HC ++++NKR IL Y++PVK+ LG +P V+ Sbjct: 1 MAHITINQYLQQVQEAIETRDGTFCAELVSFK-------HPHVANPRLQLPSPEEKCQQVLESPYDEMFAAHLRCTYAVANHDFVEAYKCQTVIVQSFLRAFQAHKE--ENWALPIMYSVALDLRIFANNADQQLVKKGKSKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYFKINKLHLCKPLI-------RAIDSSNLKDEYSMAQRVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTVQ 269
BLAST of NO08G01860 vs. NCBI_GenBank
Match: XP_009274351.1 (PREDICTED: PCI domain-containing protein 2 [Aptenodytes forsteri] >XP_009324550.1 PREDICTED: PCI domain-containing protein 2 [Pygoscelis adeliae] >XP_009481051.1 PREDICTED: PCI domain-containing protein 2 [Pelecanus crispus] >XP_009470898.1 PREDICTED: PCI domain-containing protein 2 [Nipponia nippon] >XP_009584829.1 PREDICTED: PCI domain-containing protein 2 [Fulmarus glacialis] >XP_009819118.1 PREDICTED: PCI domain-containing protein 2 [Gavia stellata] >XP_009702101.1 PREDICTED: PCI domain-containing protein 2 [Cariama cristata] >XP_009924388.1 PREDICTED: PCI domain-containing protein 2 [Haliaeetus albicilla] >XP_009924389.1 PREDICTED: PCI domain-containing protein 2 [Haliaeetus albicilla] >XP_009959106.1 PREDICTED: PCI domain-containing protein 2 [Leptosomus discolor] >XP_010292547.1 PREDICTED: PCI domain-containing protein 2 [Phaethon lepturus] >XP_010305210.1 PREDICTED: PCI domain-containing protein 2 [Balearica regulorum gibbericeps] >XP_010573937.1 PREDICTED: PCI domain-containing protein 2 [Haliaeetus leucocephalus] >XP_010573938.1 PREDICTED: PCI domain-containing protein 2 [Haliaeetus leucocephalus] >XP_011581812.1 PREDICTED: PCI domain-containing protein 2 [Aquila chrysaetos canadensis] >XP_014799671.1 PREDICTED: PCI domain-containing protein 2 [Calidris pugnax] >XP_014799672.1 PREDICTED: PCI domain-containing protein 2 [Calidris pugnax]) HSP 1 Score: 96.3 bits (238), Expect = 1.700e-16 Identity = 65/238 (27.31%), Postives = 115/238 (48.32%), Query Frame = 0 Query: 43 ARLDVRQAIHNHATLKRVAHVPQLLEPFLRGAGCLADGELEAAFEHHRGAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETV-----RLDPIMNEAVKAISDKFRVFGTVTASG----RRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPRVR 272 A L A+ NH ++ +++ FLR AF+ H+ +E W L +M +A LR+ A D++ V ++ ++ +A + + FRV + T +G ++ L L N+ Y ++N CKPL + D E++ A VTY + R + D+++K+AE +L++AF+HC ++++NKR IL Y++PVK+ LG +P V+ Sbjct: 64 AHLRCTYAVGNHDFIEAYKCQTVIVQSFLR------------AFQAHK-------------EENWALPIMYAVALDLRIFANNADQQLVKKGKSKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYFKINKLHLCKPLI-------RAIDSSNLKDEYSMAQRVTYRYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTVQ 269
BLAST of NO08G01860 vs. NCBI_GenBank
Match: XP_009511433.1 (PREDICTED: LOW QUALITY PROTEIN: PCI domain-containing protein 2 [Phalacrocorax carbo]) HSP 1 Score: 96.3 bits (238), Expect = 1.700e-16 Identity = 65/238 (27.31%), Postives = 115/238 (48.32%), Query Frame = 0 Query: 43 ARLDVRQAIHNHATLKRVAHVPQLLEPFLRGAGCLADGELEAAFEHHRGAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETV-----RLDPIMNEAVKAISDKFRVFGTVTASG----RRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPRVR 272 A L A+ NH ++ +++ FLR AF+ H+ +E W L +M +A LR+ A D++ V ++ ++ +A + + FRV + T +G ++ L L N+ Y ++N CKPL + D E++ A VTY + R + D+++K+AE +L++AF+HC ++++NKR IL Y++PVK+ LG +P V+ Sbjct: 64 AHLRCTYAVGNHDFIEAYKCQTVIVQSFLR------------AFQAHK-------------EENWALPIMYAVALDLRIFANNADQQLVKKGKSKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYFKINKLHLCKPLI-------RAIDSSNLKDEYSMAQRVTYRYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTVQ 269
BLAST of NO08G01860 vs. NCBI_GenBank
Match: XP_009556173.1 (PREDICTED: PCI domain-containing protein 2 [Cuculus canorus]) HSP 1 Score: 96.3 bits (238), Expect = 1.700e-16 Identity = 64/238 (26.89%), Postives = 116/238 (48.74%), Query Frame = 0 Query: 43 ARLDVRQAIHNHATLKRVAHVPQLLEPFLRGAGCLADGELEAAFEHHRGAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETV-----RLDPIMNEAVKAISDKFRVFGTVTASG----RRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPRVR 272 A L A+ NH ++ + L++ FLR AF+ H+ +E W L +M +A LR+ A D++ V ++ ++ +A + + FRV + T +G ++ L L N+ Y ++N CKPL + D +++ A VTY + R + D+++K+AE +L++AF+HC ++++NKR IL Y++PVK+ LG +P ++ Sbjct: 64 AHLRCIYAVGNHDFIEAYKYQTVLVQSFLR------------AFQAHK-------------EENWALPIMYAVALDLRVFANNADQQLVKKGKGKVGDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYFKINKLHLCKPLI-------RAIDSSNLKDDYSMAQRVTYRYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTIQ 269 The following BLAST results are available for this feature:
BLAST of NO08G01860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01860 ID=NO08G01860|Name=NO08G01860|organism=Nannochloropsis oceanica|type=gene|length=1678bpback to top protein sequence of NO08G01860.2 >NO08G01860.2-protein ID=NO08G01860.2-protein|Name=NO08G01860.2|organism=Nannochloropsis oceanica|type=polypeptide|length=292bpback to top protein sequence of NO08G01860.1 >NO08G01860.1-protein ID=NO08G01860.1-protein|Name=NO08G01860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=403bpback to top Synonyms
Publications
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