NO08G01860, NO08G01860 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G01860 vs. NCBI_GenBank
Match: XP_005854451.1 (pci domain-containing protein 2, partial [Nannochloropsis gaditana CCMP526] >EKU21917.1 pci domain-containing protein 2, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 468.0 bits (1203), Expect = 2.100e-128 Identity = 232/272 (85.29%), Postives = 248/272 (91.18%), Query Frame = 0 Query: 1 MVYQQVPAYLTAVAEASQQADGIALTHLFSYPCLSHRLGHQFARLDVRQAIHNHATLKRVAHVPQLLEPFLRGAGCLADGELEAAFEHHRGAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETVRLDPIMNEAVKAISDKFRVFGTVTASGRRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPRVRR 273 M++++V AYL AV EAS+Q DG ALTHLFSY CLSH LGHQFAR+DVRQAI N+A +KRVAHVP+LLEPFLR AGCLAD E+E AFEHHR AF +A +YK+ QEEWLLNLMRKLARGLRLLAQKVDKE VR DPIMNEAVKAISDKFR+FGTVTASGRRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTD+DFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFL YAF+HCP AA RNKRTILSYMVPVKLNLGLLPR R Sbjct: 1 MLFRKVTAYLDAVTEASRQEDGTALTHLFSYDCLSHGLGHQFARMDVRQAIRNNAAVKRVAHVPELLEPFLRAAGCLADQEVEKAFEHHRSAFVLAGDLYKDLQEEWLLNLMRKLARGLRLLAQKVDKEKVRFDPIMNEAVKAISDKFRLFGTVTASGRRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDDDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLTYAFRHCPAAAHRNKRTILSYMVPVKLNLGLLPRPPR 272
BLAST of NO08G01860 vs. NCBI_GenBank
Match: EWM26588.1 (pci domain-containing protein 2 [Nannochloropsis gaditana]) HSP 1 Score: 465.3 bits (1196), Expect = 1.400e-127 Identity = 230/269 (85.50%), Postives = 246/269 (91.45%), Query Frame = 0 Query: 1 MVYQQVPAYLTAVAEASQQADGIALTHLFSYPCLSHRLGHQFARLDVRQAIHNHATLKRVAHVPQLLEPFLRGAGCLADGELEAAFEHHRGAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETVRLDPIMNEAVKAISDKFRVFGTVTASGRRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPR 270 M++++V AYL AV EAS+Q DG ALTHLFSY CLSH LGHQFAR+DVRQAI N+A +KRVAHVP+LLEPFLR AGCLAD E+E AFEHHR AF +A +YK+ QEEWLLNLMRKLARGLRLLAQKVDKE VR DPIMNEAVKAISDKFR+FGTVTASGRRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTD+DFTSGEFAQADAVTYHFLRARLFLLDTNY EAERFL YAF+HCP AA RNKRTILSYMVPVKLNLGLLPR Sbjct: 38 MLFRKVTAYLDAVTEASRQEDGTALTHLFSYDCLSHGLGHQFARMDVRQAIRNNAAVKRVAHVPELLEPFLRAAGCLADQEVEKAFEHHRSAFVLAGDLYKDLQEEWLLNLMRKLARGLRLLAQKVDKEKVRFDPIMNEAVKAISDKFRLFGTVTASGRRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDDDFTSGEFAQADAVTYHFLRARLFLLDTNYIEAERFLTYAFRHCPAAAHRNKRTILSYMVPVKLNLGLLPR 306
BLAST of NO08G01860 vs. NCBI_GenBank
Match: XP_011503861.1 (PREDICTED: PCI domain-containing protein 2 homolog isoform X1 [Ceratosolen solmsi marchali]) HSP 1 Score: 102.4 bits (254), Expect = 2.400e-18 Identity = 79/254 (31.10%), Postives = 124/254 (48.82%), Query Frame = 0 Query: 35 SHRLGHQFAR-LDVRQAIHNHATLKR-VAHVPQLL-EPF-------LRGAGCLADGELEAAFEHHRGAFAMACGMYKEQQEE-WLLNLMRKLARGLRLLAQKVD--KETVRLDPIMN--EAVKAISDKFRVFGTVTASG----RRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPR 270 SH+ G+ A L +RQ I HAT + + HV ++L PF L+ L + + A+ H A + + + Q+EE W+L +M + LRLLA K + K+ P N + + + FR+ S +R L L N+ + Y ++N CKPL + + F+ A +TY F R + D+NYK A+ +L YAF+HC +K+NKR IL Y++PVK+ LG +P+ Sbjct: 13 SHQDGNSLANLLSLRQNIQLHATSETYMTHVIEVLPSPFDDLVLYHLKTLFSLNEDDALIAYMSHSSAVQVLIKILQIQKEENWMLPVMNMMCLELRLLAVKTETSKKIRNGKPGENLEKCAECLMSCFRICAADNRSSEDDTKRWGMLSLVNQLLKVYFRINKLHLCKPLI-------RAIESSIYKDHFSLAQQITYRFFVGRKAMFDSNYKAADEYLTYAFQHCHKKSKKNKRLILMYLIPVKMLLGYIPK 259
BLAST of NO08G01860 vs. NCBI_GenBank
Match: XP_010090037.1 (enhanced ethylene response protein 5 [Morus notabilis] >EXB38834.1 PCI domain-containing protein 2 [Morus notabilis]) HSP 1 Score: 100.9 bits (250), Expect = 6.900e-18 Identity = 71/272 (26.10%), Postives = 122/272 (44.85%), Query Frame = 0 Query: 3 YQQVPAYLTAVAEASQQADGIALTHLFSYPCLSHRLGHQFARLDVRQAIHNHATL----KRVAHVPQLLEPFLRGAGCLADGELEAAFEHHRGAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETVRLDPIMNEAVKAISDKFRVFGTVTASGRRRVALMLANEQII-CYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPR 270 ++++ YL A+A DG +L L S LS + D H+ L + +H+ ++L P R G L +++ + + ++ W L + +A +R+LA+ D+E + + A S +VFG + G +RV + Q+ Y +L C+ + R T F EF + D VTY + RL + + N+ A+ L+YA KHC ++ N R IL Y++PVKL++G+LP+ Sbjct: 10 HRRIADYLNRFADAVSYQDGASLKKLLS---LSSNSSSLLSLADALAVFHDSNRLIKQSDKFSHLAEILLPLFRALHSYRIGNLVDSYQSYEKSANAFIQEFRNWDSAWALEALYVVAYEIRILAENADRELASNGKLPEKLKAAGSFLMKVFGVLAGKGAKRVGALYVTCQLFKIYFKLGTVHLCRSV-----IRSIETARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPAADHKLSYALKHCNRQSEANIRMILKYLIPVKLSIGILPK 273
BLAST of NO08G01860 vs. NCBI_GenBank
Match: XP_011312106.1 (PREDICTED: PCI domain-containing protein 2 [Fopius arisanus]) HSP 1 Score: 99.8 bits (247), Expect = 1.500e-17 Identity = 77/274 (28.10%), Postives = 123/274 (44.89%), Query Frame = 0 Query: 8 AYLTAVAEASQQADGIALTHLFSYPCLSHRLGHQFARLDVRQAIHNHATLKRVAHVPQLLEPF-LRGAGCLADGELEAAFEHHRGAFAMACGMYK----EQQEEWLLNLMRKLARGLRLLAQKVD---KETVRLDPIMNEAVKAISDKFRVFGTVTASG----RRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPR 270 +Y+ + DG+AL L S L H A ++ Q A K + H+ + L LA E A HR A+ + K +++E W+L +M + LRLLA + + + + ++ ++ + + FRV S +R L L N+ + Y ++N CKPL + D F A +TY F R + D++YK A +L YAF+HC A+ +NKR IL+Y+VPVK+ LG +P+ Sbjct: 3 SYIMQLRRVWLNQDGLALADLLS-------LRHNHA--NISQLCTEIAMTKAMEHLSAPFDDLVLLHLKTLASANGEDARATHRNQSALVQSVMKILQLQKEENWMLPVMNVVCLELRLLAVQAENSKSKNTKPGELLEQSAECLMGCFRVCAADNRSSEEDTKRWGMLSLVNQLLKIYFRINKLHLCKPLI-------RAIDSSVYKDHFPLAQRITYKFFVGRKAMFDSDYKSANEYLTYAFEHCHKASSKNKRLILTYLVPVKMLLGYMPK 260
BLAST of NO08G01860 vs. NCBI_GenBank
Match: XP_001602732.1 (PREDICTED: PCI domain-containing protein 2 [Nasonia vitripennis] >OXU30665.1 hypothetical protein TSAR_002546 [Trichomalopsis sarcophagae]) HSP 1 Score: 98.2 bits (243), Expect = 4.400e-17 Identity = 71/277 (25.63%), Postives = 121/277 (43.68%), Query Frame = 0 Query: 9 YLTAVAEASQQADGIALTHLFSYPCLSHRLGHQFARLDVRQAIHNHATLKRVAHVPQLLEPF-------LRGAGCLADGELEAAFEHHRGAFAMACGMYKEQQEE-WLLNLMRKLARGLRLLAQKVDK----ETVRLDPIMNEAVKAISDKFRVFGTVTASG----RRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPR 270 Y+ + + DG L +L S SH +H A + L PF L+ L + +L + + A + + Q+EE W+L +M + LRLLA K ++ + ++ + + + + FR+ S +R L L N+ + Y ++N CKPL + + +F+ A +TY F R + D++YK A+ +L YAF+HC +K+NKR IL Y++PVK+ LG +P+ Sbjct: 3 YIMQLRRSWINQDGFLLANLLSLRAFSH--------------LHGSAESYMARAMEMLPPPFDDLVLYHLKTLSSLKNDDLTVTYSYQNSAVQTLVKILQLQKEENWMLPVMNMMCLELRLLAMKTERCKKNKNIKPGENLEKCAECLMSCFRICAADNRSSEDDTKRWGMLALVNQLLKVYFRINKLHLCKPLI-------RAIESSAYRDQFSLAQQITYKFFVGRKAMFDSDYKAADEYLTYAFQHCHKKSKKNKRLILMYLIPVKMLLGYIPK 258
BLAST of NO08G01860 vs. NCBI_GenBank
Match: NP_001033674.1 (PCI domain-containing protein 2 [Bos taurus] >Q2TBN6.1 RecName: Full=PCI domain-containing protein 2; AltName: Full=CSN12-like protein >AAI09885.1 PCI domain containing 2 [Bos taurus]) HSP 1 Score: 97.8 bits (242), Expect = 5.800e-17 Identity = 74/284 (26.06%), Postives = 132/284 (46.48%), Query Frame = 0 Query: 1 MVYQQVPAYLTAVAEASQQADGIALTHLFSYPCLSHRLGHQFARLDVRQAIHNHATLKRVAHVP--QLLEPFLRGAGCLADGELEAAFEHHR---GAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETV-----RLDPIMNEAVKAISDKFRVFGTVTASG----RRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPRV 271 M + + YL V EA DG +L L S+ H Q ++V P ++ LR + + + A++ +F A +KE E W L +M +A LR+ A D++ V ++ ++ +A + + FRV + T +G ++R L L N+ Y ++N CKPL + D +++ A VTY + R + D+++K+AE +L++AF+HC ++++NKR +L Y++PVK+ LG +P + Sbjct: 1 MAHITINQYLQQVCEAIDTRDGASLAELVSFK-------HPHVANPRLQMASPEEKCQQVLEPPYDEMFAAHLRCTYAVGNHDFIEAYKCQTVIVQSFLRAFQAHKE--ENWALPVMYAVALDLRIFANNADQQLVKKGKSKVGDMLEKAAELLMGCFRVCASDTRAGIEDSKKRGMLFLVNQLFKIYFKINKLHLCKPLI-------RAIDSSNLKDDYSTAQRVTYRYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMVLIYLLPVKMLLGHMPTI 268
BLAST of NO08G01860 vs. NCBI_GenBank
Match: XP_006660595.1 (PREDICTED: enhanced ethylene response protein 5 [Oryza brachyantha]) HSP 1 Score: 97.4 bits (241), Expect = 7.600e-17 Identity = 71/274 (25.91%), Postives = 123/274 (44.89%), Query Frame = 0 Query: 3 YQQVPAYLTAVAEASQQADGIALTHLFSYPCLSHRLGHQFARLDVRQAIHNHATLKRVA-----HVPQLLEPFLRGAGCLADGELEAAFEHHRGAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETVRLDPIMNEAVKAISDKFRVFGTVTASGRRRVALMLANEQII-CYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPRV 271 ++++ YL+ +A++ +DG AL L + + A + A+ R+A H+ LL P LR + G A+ A ++ + W + M +A +RLLA+K D+E ++ A S +VFG + G +R+ + Q+ Y +L C+ + R T +F +F D VTY + RL + + N+ A++ L YA HC + N R IL +++PVKL++G+LPR+ Sbjct: 11 HRRIADYLSRLADSVSSSDGAALASLLA-------VSSAPASTPLSDALSAFPDFPRLATDRYPHLADLLAPLLRAVHSHSLGRFADAYSSFEKAANAFLQEFRNWETPWAMEAMHTVALEIRLLAEKADRELATSGKNPDKLQAAGSFLMKVFGALAVKGPKRIGALYVTCQLFKIYFRLGTVHLCRSV-----IRSIETARNFDFEDFPVKDKVTYMYYTGRLEVFNENFLIADQKLTYALMHCNPQYESNLRRILKFLIPVKLSIGVLPRI 272
BLAST of NO08G01860 vs. NCBI_GenBank
Match: XP_015116526.1 (PREDICTED: PCI domain-containing protein 2 [Diachasma alloeum]) HSP 1 Score: 97.1 bits (240), Expect = 9.900e-17 Identity = 74/274 (27.01%), Postives = 123/274 (44.89%), Query Frame = 0 Query: 8 AYLTAVAEASQQADGIALTHLFSYPCLSHRLGHQFARLDVRQAIHNHATLKRVAHV----PQLLEPFLRGAGCLADGELEAAFEHHRGAFAMACGMYKEQQEE-WLLNLMRKLARGLRLL---AQKVDKETVRLDPIMNEAVKAISDKFRVFGTVTASG----RRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPR 270 +Y+ + DG+AL L S L H A ++ Q A K + H+ L+ L+ + + AA+ + + + Q+EE W+L +M + LRLL A+ + + + ++ + + + FRV S +R L L N+ + Y ++N CKPL + D F A +TY F R + D++YK A+ +L YAF+HC A+ +NKR IL+Y+VPVK+ LG +P+ Sbjct: 3 SYIMQLRRVWLNQDGLALADLLS-------LRHNHA--NIPQLSTESAMTKAMEHLSAPFDDLVLLHLKTLASASKEDARAAYHNQSAVVQSVTKILQLQKEENWMLPVMNVVCLELRLLAVQAENLKSKNTKPGEVLEKCAECLMGCFRVCAADNRSSEEDTKRWGMLSLVNQLLKVYFRINKLHLCKPLI-------RAIDSSVYKDHFPLAQRITYKFFVGRKAMFDSDYKSADEYLTYAFEHCHKASSKNKRLILTYLVPVKMLLGYMPK 260
BLAST of NO08G01860 vs. NCBI_GenBank
Match: XP_023328428.1 (PCI domain-containing protein 2-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 97.1 bits (240), Expect = 9.900e-17 Identity = 80/276 (28.99%), Postives = 129/276 (46.74%), Query Frame = 0 Query: 8 AYLTAVAEASQQADGIALTHLFSYPCLSHRLGHQFARLDVRQAIHNHATLKRVAHVP--QLLEPFLRGAGCLADGELEAAFEHHR---GAFAMACGMYKEQQEEWLLNLMRKLARGLRLLAQKVDKETVR-----LDPIMNEAVKAISDKFRVFGTVTAS----GRRRVALMLANEQIICYLQLNNPRQCKPLTDWADARHKLTDEDFTSGEFAQADAVTYHFLRARLFLLDTNYKEAERFLAYAFKHCPVAAKRNKRTILSYMVPVKLNLGLLPR 270 AYL+ VA A + DG L+ L S+ SH +RL V++ A ++RV P +++ LR A+ E AF+ +FA K+ E WLL +M+ + LR A + D++ + + +A + I FRV S ++ L L N+ Y ++N CKPL + + F ++ VTY + R ++ D N++EAE +L YAF+ C K+NK+ IL Y++PVK+ LG +P+ Sbjct: 8 AYLSKVAVAYENYDGFNLSILLSFED-SHIAN---SRLQVQEP---EAAVERVIDQPLDEMVAAHLRACWAWANSEFTEAFKCQEIVVNSFARLLSSCKD--ENWLLPVMQVVCLDLRKFALRADQQKTKGGKNNTGQTLEKASEGIMACFRVCAADARSAEELSKKWGMLNLVNQLFKIYFKVNKLHLCKPLI-------RAIESSAFKDRFKKSQLVTYRYYVGRKYMFDYNFREAEEYLRYAFEKCDQRMKKNKKLILIYLIPVKMLLGQMPK 267 The following BLAST results are available for this feature:
BLAST of NO08G01860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G01860 ID=NO08G01860|Name=NO08G01860|organism=Nannochloropsis oceanica|type=gene|length=1678bpback to top protein sequence of NO08G01860.2 >NO08G01860.2-protein ID=NO08G01860.2-protein|Name=NO08G01860.2|organism=Nannochloropsis oceanica|type=polypeptide|length=292bpback to top protein sequence of NO08G01860.1 >NO08G01860.1-protein ID=NO08G01860.1-protein|Name=NO08G01860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=403bpback to top Synonyms
Publications
|