NO08G01740, NO08G01740 (gene) Nannochloropsis oceanica

Overview
NameNO08G01740
Unique NameNO08G01740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1176
Alignment locationchr8:541712..542887 -

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Properties
Property NameValue
DescriptionMrna cap guanine-n7 methyltransferase 1-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:541712..542887 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036412HAD-like_sf
IPR004274NIF
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
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BLAST of NO08G01740 vs. NCBI_GenBank
Match: PNT00638.1 (hypothetical protein POPTR_015G059000v3 [Populus trichocarpa])

HSP 1 Score: 100.1 bits (248), Expect = 1.600e-17
Identity = 72/230 (31.30%), Postives = 105/230 (45.65%), Query Frame = 0 
Query:  148 EVRVKSVERPLGGKPKVELVLVPR-------------RKLLILDLNGVLFNRYPVGDARREGGRGGWEGGRVI----------KRPGCDDFLEFCFAHFDVAAWSCCRKETLE--MEIFNGREKELVFVNWGMHSTNLWPRHSAVSKDKPLFLKELRRLWEG-----QLERVGYGEQNTILLDNHVEKFEGNPVGTCVVVPEYEDGAEPEDGVLSLEGELVGHLRRMAVA 348
            E ++  +   +G +  V+ V +P+             +KLLILD+NG+L +      A       G++   V+          KRP CDDFL FCF  FDV  WS   K  +   +E   G  +  +   W           +  ++ KPLFLKEL+++WE      QL +  Y E NT+LLD+   K   NPV T +  P Y    +  D  L  EG+L  +L R+A A
Sbjct:  190 ESKITEIRNSVGVEASVKEVKIPQACALERPHTGRVTKKLLILDVNGLLADIVSYVSA-------GYQANIVVSGKSGEYCFFKRPFCDDFLRFCFEKFDVGVWSSRTKRNVNPLIEFLFGDSRHKLLFCWDQSHCTDTGFTTVENRSKPLFLKELKKIWEYLESTLQLNKGEYDESNTLLLDDSPYKALCNPVHTAIFPPSY-GYRDLADSSLGPEGDLRVYLERLAEA 411
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BLAST of NO08G01740 vs. NCBI_GenBank
Match: OMO79783.1 (NLI interacting factor [Corchorus olitorius])

HSP 1 Score: 100.1 bits (248), Expect = 1.600e-17
Identity = 67/190 (35.26%), Postives = 97/190 (51.05%), Query Frame = 0 
Query:  169 VPRRKLLILDLNGVLFNRYP-VGDAR---REGGRGGWEGGRVIKRPGCDDFLEFCFAHFDVAAWSCCRKETLEMEI---FNGREKELVFVNWGMHSTNLWPRHSAVSKDKPLFLKELRRLWEG----QLERVGYGEQNTILLDNHVEKFEGNPVGTCVVVPEYEDGAEPEDGVLSLEGELVGHLRRMAVA 348
            VP++KLL+LDLNG+L +  P  G+ R   +  G+G      V KRP C+DFLEFC   F+V  WS    + + + +      R+K L+F  W      +    +   K KPL LKELR+LW+       E+  Y E NT+LLD+   K   NP  T +    Y+   + ED  L   G++  +L  +A A
Sbjct:  284 VPKKKLLVLDLNGILVDVVPNPGEFRPHIKLSGKG------VFKRPFCNDFLEFCLRTFNVGIWSSRINKNVRILVDFLMKKRKKSLLFC-WDRSRCTITKLETIEDKPKPLVLKELRKLWKNVSKLPWEKGEYDESNTLLLDDSPYKALRNPANTAIFPFPYQ-YTDAEDASLGPGGDIRTYLEGVAAA 465
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BLAST of NO08G01740 vs. NCBI_GenBank
Match: OMO62940.1 (NLI interacting factor [Corchorus capsularis])

HSP 1 Score: 99.8 bits (247), Expect = 2.100e-17
Identity = 66/191 (34.55%), Postives = 97/191 (50.79%), Query Frame = 0 
Query:  170 PRRKLLILDLNGVLFNRYP-VGDARRE---GGRGGWEGGRVIKRPGCDDFLEFCFAHFDVAAWSCCRKETLEMEI---FNGREKELVFVNWGMHSTNLWPRHSAVSKDKPLFLKELRRLWEG----QLERVGYGEQNTILLDNHVEKFEGNPVGTCVVVPEYEDGAEPEDGVLSLEGELVGHLRRMAVAPE 350
            P++KLL+LDLNG+L +  P  G+ R +    G+G      V KRP C+DFLEFC   F+V  WS    + + + +      R+K L+F  W      +    +   K KPL LKELR+LW+       E+  Y E NT+LLD+   K   NP  T +    Y+   + ED  L   G++  +L  +A A +
Sbjct:  165 PKKKLLVLDLNGILVDVVPNPGEFRPDIKLSGKG------VFKRPFCNDFLEFCLRTFNVGIWSSRINKNVRILVDFLLRKRKKNLLFC-WDRSRCTITKLETLEDKPKPLVLKELRKLWKNVSKLPWEKGEYDESNTLLLDDSPYKALRNPANTAIFPFPYQ-YTDAEDASLGPGGDIRTYLEGVAAAED 347
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BLAST of NO08G01740 vs. NCBI_GenBank
Match: XP_016563362.1 (PREDICTED: uncharacterized protein LOC107862336 isoform X1 [Capsicum annuum] >XP_016563363.1 PREDICTED: uncharacterized protein LOC107862336 isoform X1 [Capsicum annuum] >XP_016563364.1 PREDICTED: uncharacterized protein LOC107862336 isoform X1 [Capsicum annuum])

HSP 1 Score: 98.2 bits (243), Expect = 6.000e-17
Identity = 70/208 (33.65%), Postives = 100/208 (48.08%), Query Frame = 0 
Query:  149 VRVKSVERPLGGKPKVELVLVPRRKLLILDLNGVLFNRYPVGDARREGGRGGWEGGR-VIKRPGCDDFLEFCFAHFDVAAWSCCRKETLE--MEIFNGREKELVFVNWGM-HSTNLWPRHSAVSKDKPLFLKELRRLWEG-----QLERVGYGEQNTILLDNHVEKFEGNPVGTCVVVPEYEDGAEPEDGVLSLEGELVGHLRRMAVA 348
            V V  + R L G+          +KLL+LDLNG+L +  P+              G+ V KRP  DDFL+FCF  F+V  WS   ++ +E  ++   G  KE +   W   H T+         +DKP+ LKEL++LWE        ER  Y E NT+LLD+   K   NP  T V    Y    E +D +   EG+L  +L  +++A
Sbjct:  308 VTVPPLTRALNGR--------SNKKLLVLDLNGLLADIVPLQHVPYGFKVDAIVSGKAVFKRPFHDDFLQFCFEKFNVGVWSSRIRKNVELVLDFLLGNAKEKLLFCWDQSHCTDTGFPVVGKRRDKPIILKELKKLWEKFEPDLPWERGEYDESNTLLLDDSPHKALCNPPNTAVFPNTYLYTDEKDDSLAGPEGDLRVYLEGLSMA 507
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BLAST of NO08G01740 vs. NCBI_GenBank
Match: XP_010258020.1 (PREDICTED: uncharacterized protein LOC104597923 isoform X1 [Nelumbo nucifera])

HSP 1 Score: 97.8 bits (242), Expect = 7.800e-17
Identity = 67/188 (35.64%), Postives = 97/188 (51.60%), Query Frame = 0 
Query:  171 RRKLLILDLNGVLFNRYPVGDARREGGRGGWEGGR--VIKRPGCDDFLEFCFAHFDVAAWSCCRKETLE--MEIFNGREKELVFVNWGMHSTNLWPRHSAVSKDKPLFLKELRRLWEG-----QLERVGYGEQNTILLDNHVEKFEGNPVGTCVVVPEYEDGAEPEDGVLSLEGELVGHLRRMAVAPE 350
            +RKLLILDLNG+L +   + +   +G +   +  R  + KRP CDDFLEFCF  FDVA WS   K+ ++  ++   G  K  +   W          ++  +K KPL LKELR+LW+        E+  Y E NT+LLD+   K   NP  T +    Y    + ED  L   G+L  +L  +A+A +
Sbjct:  291 KRKLLILDLNGLLAD---IVNFVPDGYKPDKKVSRKALFKRPFCDDFLEFCFGGFDVAVWSSRIKKNVDTVVDFLMGEMKHRLLFCWDQSHCTETGFNTIENKHKPLVLKELRKLWDKYDPHLPWEKGEYNESNTLLLDDSPYKALRNPPYTAIFPNTYR-FQDTEDNSLGPGGDLRVYLEGLAMAED 474
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BLAST of NO08G01740 vs. NCBI_GenBank
Match: XP_010258021.1 (PREDICTED: uncharacterized protein LOC104597923 isoform X2 [Nelumbo nucifera])

HSP 1 Score: 97.8 bits (242), Expect = 7.800e-17
Identity = 67/188 (35.64%), Postives = 97/188 (51.60%), Query Frame = 0 
Query:  171 RRKLLILDLNGVLFNRYPVGDARREGGRGGWEGGR--VIKRPGCDDFLEFCFAHFDVAAWSCCRKETLE--MEIFNGREKELVFVNWGMHSTNLWPRHSAVSKDKPLFLKELRRLWEG-----QLERVGYGEQNTILLDNHVEKFEGNPVGTCVVVPEYEDGAEPEDGVLSLEGELVGHLRRMAVAPE 350
            +RKLLILDLNG+L +   + +   +G +   +  R  + KRP CDDFLEFCF  FDVA WS   K+ ++  ++   G  K  +   W          ++  +K KPL LKELR+LW+        E+  Y E NT+LLD+   K   NP  T +    Y    + ED  L   G+L  +L  +A+A +
Sbjct:  291 KRKLLILDLNGLLAD---IVNFVPDGYKPDKKVSRKALFKRPFCDDFLEFCFGGFDVAVWSSRIKKNVDTVVDFLMGEMKHRLLFCWDQSHCTETGFNTIENKHKPLVLKELRKLWDKYDPHLPWEKGEYNESNTLLLDDSPYKALRNPPYTAIFPNTYR-FQDTEDNSLGPGGDLRVYLEGLAMAED 474
[Close]
BLAST of NO08G01740 vs. NCBI_GenBank
Match: XP_019185761.1 (PREDICTED: uncharacterized protein LOC109180573 isoform X1 [Ipomoea nil] >XP_019185762.1 PREDICTED: uncharacterized protein LOC109180573 isoform X1 [Ipomoea nil] >XP_019185763.1 PREDICTED: uncharacterized protein LOC109180573 isoform X1 [Ipomoea nil])

HSP 1 Score: 97.8 bits (242), Expect = 7.800e-17
Identity = 63/179 (35.20%), Postives = 90/179 (50.28%), Query Frame = 0 
Query:  171 RRKLLILDLNGVLFNRYPVGDARREGGRGGWEGGRVIKRPGCDDFLEFCFAHFDVAAWSCCRKETL--EMEIFNGREKELVFVNWGMHSTNLWPRHSAVSKDKPLFLKELRRLWEGQLERVGYGEQNTILLDNHVEKFEGNPVGTCVVVPEYEDGAEPEDGVLSLEGELVGHLRRMAVA 348
            RRKLLILDLNG+L +   +   +      G  G  + KRP CDDFL+FCF  F VA WS   K  +   ++   G  K  +   W M    +    +   K KPL  K+LR++WE   ++  + E NT+LLD+   K   NPV T  + P+  +    +D  L   G+L  +L  +A A
Sbjct:  758 RRKLLILDLNGLLAD-IVLPHPKDCKADTGISGRAIFKRPFCDDFLKFCFERFHVAIWSSRSKRIIVRVVDYLLGDLKHKLLFCWDMSHCTMTRYKTLEIKHKPLVCKDLRKIWEKHWDKGDFDESNTLLLDDSPYKALLNPVHT-TIFPDSFNYRLKDDNSLGPGGDLRMYLENLAEA 934
[Close]
BLAST of NO08G01740 vs. NCBI_GenBank
Match: XP_019185764.1 (PREDICTED: uncharacterized protein LOC109180573 isoform X2 [Ipomoea nil])

HSP 1 Score: 97.8 bits (242), Expect = 7.800e-17
Identity = 63/179 (35.20%), Postives = 90/179 (50.28%), Query Frame = 0 
Query:  171 RRKLLILDLNGVLFNRYPVGDARREGGRGGWEGGRVIKRPGCDDFLEFCFAHFDVAAWSCCRKETL--EMEIFNGREKELVFVNWGMHSTNLWPRHSAVSKDKPLFLKELRRLWEGQLERVGYGEQNTILLDNHVEKFEGNPVGTCVVVPEYEDGAEPEDGVLSLEGELVGHLRRMAVA 348
            RRKLLILDLNG+L +   +   +      G  G  + KRP CDDFL+FCF  F VA WS   K  +   ++   G  K  +   W M    +    +   K KPL  K+LR++WE   ++  + E NT+LLD+   K   NPV T  + P+  +    +D  L   G+L  +L  +A A
Sbjct:  742 RRKLLILDLNGLLAD-IVLPHPKDCKADTGISGRAIFKRPFCDDFLKFCFERFHVAIWSSRSKRIIVRVVDYLLGDLKHKLLFCWDMSHCTMTRYKTLEIKHKPLVCKDLRKIWEKHWDKGDFDESNTLLLDDSPYKALLNPVHT-TIFPDSFNYRLKDDNSLGPGGDLRMYLENLAEA 918
[Close]
BLAST of NO08G01740 vs. NCBI_GenBank
Match: XP_019185765.1 (PREDICTED: uncharacterized protein LOC109180573 isoform X3 [Ipomoea nil])

HSP 1 Score: 97.8 bits (242), Expect = 7.800e-17
Identity = 63/179 (35.20%), Postives = 90/179 (50.28%), Query Frame = 0 
Query:  171 RRKLLILDLNGVLFNRYPVGDARREGGRGGWEGGRVIKRPGCDDFLEFCFAHFDVAAWSCCRKETL--EMEIFNGREKELVFVNWGMHSTNLWPRHSAVSKDKPLFLKELRRLWEGQLERVGYGEQNTILLDNHVEKFEGNPVGTCVVVPEYEDGAEPEDGVLSLEGELVGHLRRMAVA 348
            RRKLLILDLNG+L +   +   +      G  G  + KRP CDDFL+FCF  F VA WS   K  +   ++   G  K  +   W M    +    +   K KPL  K+LR++WE   ++  + E NT+LLD+   K   NPV T  + P+  +    +D  L   G+L  +L  +A A
Sbjct:  739 RRKLLILDLNGLLAD-IVLPHPKDCKADTGISGRAIFKRPFCDDFLKFCFERFHVAIWSSRSKRIIVRVVDYLLGDLKHKLLFCWDMSHCTMTRYKTLEIKHKPLVCKDLRKIWEKHWDKGDFDESNTLLLDDSPYKALLNPVHT-TIFPDSFNYRLKDDNSLGPGGDLRMYLENLAEA 915
[Close]
BLAST of NO08G01740 vs. NCBI_GenBank
Match: XP_019185766.1 (PREDICTED: uncharacterized protein LOC109180573 isoform X4 [Ipomoea nil])

HSP 1 Score: 97.8 bits (242), Expect = 7.800e-17
Identity = 63/179 (35.20%), Postives = 90/179 (50.28%), Query Frame = 0 
Query:  171 RRKLLILDLNGVLFNRYPVGDARREGGRGGWEGGRVIKRPGCDDFLEFCFAHFDVAAWSCCRKETL--EMEIFNGREKELVFVNWGMHSTNLWPRHSAVSKDKPLFLKELRRLWEGQLERVGYGEQNTILLDNHVEKFEGNPVGTCVVVPEYEDGAEPEDGVLSLEGELVGHLRRMAVA 348
            RRKLLILDLNG+L +   +   +      G  G  + KRP CDDFL+FCF  F VA WS   K  +   ++   G  K  +   W M    +    +   K KPL  K+LR++WE   ++  + E NT+LLD+   K   NPV T  + P+  +    +D  L   G+L  +L  +A A
Sbjct:  652 RRKLLILDLNGLLAD-IVLPHPKDCKADTGISGRAIFKRPFCDDFLKFCFERFHVAIWSSRSKRIIVRVVDYLLGDLKHKLLFCWDMSHCTMTRYKTLEIKHKPLVCKDLRKIWEKHWDKGDFDESNTLLLDDSPYKALLNPVHT-TIFPDSFNYRLKDDNSLGPGGDLRMYLENLAEA 828
The following BLAST results are available for this feature:
BLAST of NO08G01740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
PNT00638.11.600e-1731.30hypothetical protein POPTR_015G059000v3 [Populus t... [more]
OMO79783.11.600e-1735.26NLI interacting factor [Corchorus olitorius][more]
OMO62940.12.100e-1734.55NLI interacting factor [Corchorus capsularis][more]
XP_016563362.16.000e-1733.65PREDICTED: uncharacterized protein LOC107862336 is... [more]
XP_010258020.17.800e-1735.64PREDICTED: uncharacterized protein LOC104597923 is... [more]
XP_010258021.17.800e-1735.64PREDICTED: uncharacterized protein LOC104597923 is... [more]
XP_019185761.17.800e-1735.20PREDICTED: uncharacterized protein LOC109180573 is... [more]
XP_019185764.17.800e-1735.20PREDICTED: uncharacterized protein LOC109180573 is... [more]
XP_019185765.17.800e-1735.20PREDICTED: uncharacterized protein LOC109180573 is... [more]
XP_019185766.17.800e-1735.20PREDICTED: uncharacterized protein LOC109180573 is... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL106nonsL106Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR139ngnoR139Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G01740.1NO08G01740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G01740.1NO08G01740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G01740 ID=NO08G01740|Name=NO08G01740|organism=Nannochloropsis oceanica|type=gene|length=1176bp
ATGGGAGGAGGACGAGGACCTGATGATGGATCAAGGAAAGGGAAGGCCAA
CAGCAACAGCAGCTGCAGTGAAGAGGGAGGAGAGGGAGGGAGGCAGGATC
GAAGGAACATGTGGGTTATTGCGGCGCGGAGTGGATCTGCCCTTAGACGA
GGTGGAGGTCGGGGGGAGGGAGGGAGGGAGGGAGGGCGGGTGTACCAAGG
GGCCGTGTATGCGGCGCATGAAGTGCACGGAATATTTATTTACTTTGGAA
TGGTAGTGAAAGAGGAGAGGGAGGGGAGAGACGGAGGGGTAGAAGGAGGA
GCCATTAGATTTTTTGAGGCCAGCGGGCGAATAACGCGAAGCGGATTGCC
GGCATTAGTGTTGGAGGACCTCGAAAAAAAGGCGGAGGAGGGGAGGAGGG
GAGGGAGGGAGGGAGGAGGGATAAGGAGGGAAACTTTGGTGGAGGTGAGG
GTGAAGAGCGTGGAGAGGCCGTTGGGGGGAAAACCGAAGGTGGAGCTGGT
GCTGGTCCCGAGGAGGAAGTTGCTGATATTGGACTTGAATGGGGTGTTAT
TTAATCGCTACCCCGTGGGGGATGCTCGACGGGAAGGAGGAAGAGGAGGT
TGGGAGGGAGGACGGGTGATAAAACGGCCGGGTTGCGACGATTTCTTGGA
GTTTTGTTTCGCGCACTTTGATGTGGCGGCTTGGAGCTGCTGTAGGAAGG
AGACGCTGGAGATGGAGATTTTCAACGGGAGAGAGAAAGAGTTGGTGTTT
GTGAACTGGGGCATGCACAGCACGAATTTATGGCCGAGACACTCGGCGGT
TAGTAAAGACAAGCCTTTATTTCTGAAAGAACTGAGGCGGTTGTGGGAGG
GACAGCTGGAGAGGGTAGGGTATGGGGAGCAGAACACGATTTTGCTCGAC
AACCACGTGGAGAAGTTCGAGGGGAATCCAGTGGGGACGTGCGTGGTGGT
GCCCGAGTACGAGGACGGGGCCGAGCCGGAAGACGGGGTGTTGAGCTTGG
AGGGGGAGCTCGTCGGGCACCTGCGACGGATGGCGGTGGCGCCCGAGGGG
GGGAGAGGGGAGGAGGGGGGGGGGGGAGTGCGGGATATGTGCGGAGGACG
AAAAGTGTTTATTTCCCGGAGAAGCACCCAGATCCGCCGGTGGACGTGGC
GGCCATGGTCAAGGAGGAGGTGTTGA
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protein sequence of NO08G01740.1

>NO08G01740.1-protein ID=NO08G01740.1-protein|Name=NO08G01740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=392bp
MGGGRGPDDGSRKGKANSNSSCSEEGGEGGRQDRRNMWVIAARSGSALRR
GGGRGEGGREGGRVYQGAVYAAHEVHGIFIYFGMVVKEEREGRDGGVEGG
AIRFFEASGRITRSGLPALVLEDLEKKAEEGRRGGREGGGIRRETLVEVR
VKSVERPLGGKPKVELVLVPRRKLLILDLNGVLFNRYPVGDARREGGRGG
WEGGRVIKRPGCDDFLEFCFAHFDVAAWSCCRKETLEMEIFNGREKELVF
VNWGMHSTNLWPRHSAVSKDKPLFLKELRRLWEGQLERVGYGEQNTILLD
NHVEKFEGNPVGTCVVVPEYEDGAEPEDGVLSLEGELVGHLRRMAVAPEG
GRGEEGGGGVRDMCGGRKVFISRRSTQIRRWTWRPWSRRRC*
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Synonyms
Publications