NO08G01740, NO08G01740 (gene) Nannochloropsis oceanica

Overview
NameNO08G01740
Unique NameNO08G01740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1176
Alignment locationchr8:541712..542887 -

Link to JBrowse

Properties
Property NameValue
DescriptionMrna cap guanine-n7 methyltransferase 1-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:541712..542887 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036412HAD-like_sf
IPR004274NIF
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
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BLAST of NO08G01740 vs. NCBI_GenBank
Match: EWM26676.1 (mrna cap guanine-n7 methyltransferase 1-like protein [Nannochloropsis gaditana])

HSP 1 Score: 323.2 bits (827), Expect = 1.100e-84
Identity = 174/328 (53.05%), Postives = 211/328 (64.33%), Query Frame = 0 
Query:   26 GGEGGRQDRRNMWVIAARSG--SALRRGGGRGEXXXXGGRVYQGAVYAAHEVHGIFIYFGMVVKEEREGRDGGVEGGAIRFFEASGRITRSGLPALVLEDLEXXXXXXXXXXXXXXXXXRETLVEVRVKSVERPLGGKPKVELVLVPRRKLLILDLNGVLFNRYPVGDARREGGRGGWEGGRVIKRPGCDDFLEFCFAHFDVAAWSCCRKETLEMEIFNGREKELVFVNWGMHSTNLWPRHSAVSKDKPLFLKELRRLWEGQLERVGYGEQNTILLDNHVEKFEGNPVGTCVVVPEYEDGAEPEDGVLSLEGELVGHLRRMAVAPEGG 352
            GG  G++  R      AR+G  + L RG          G  YQG VYA+HE HG F YFG +             G   R FE SGRITR GLP+  + D+E                  E L+ +RVKS+ERP+GGKP+VEL+LVP RKLLILDLNGVLFNRY V D RR         G + KRP C++FL+FCF HF VA WSCC KET+E+ +F  REK+L+F N+  HS NLWPRHSAVS DKPLFLK+L RLW+ QL+RV +   +TIL+DNH+EKFE NP+GTCV+VPEY D A+P D +LSLEGELV HLR MA  P+ G
Sbjct:  237 GGRPGKEAGRE----GARTGDQTPLSRGEPLSLDDAEVGGTYQGFVYASHETHGFFFYFGRL-----------DPGRKFRSFECSGRITRFGLPSPWIADMERRVLRARESAPGLVRP--EWLLPLRVKSMERPVGGKPRVELILVPERKLLILDLNGVLFNRYSVHDERR-------GLGEIQKRPKCEEFLDFCFEHFHVACWSCCNKETMELGVFGAREKDLLFSNYSAHSINLWPRHSAVSVDKPLFLKDLSRLWKQQLDRVAFDASSTILVDNHLEKFERNPLGTCVLVPEYSDAAQPPDDLLSLEGELVAHLRAMAHTPDSG 540
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BLAST of NO08G01740 vs. NCBI_GenBank
Match: GBG33282.1 (mRNA cap guanine-N7 methyltransferase [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 147.1 bits (370), Expect = 1.100e-31
Identity = 78/173 (45.09%), Postives = 102/173 (58.96%), Query Frame = 0 
Query:  174 LLILDLNGVLFNRYPVGDARREGGRGGWEGGRVIKRPGCDDFLEFCFAHFDVAAWSCCRKETLEMEIFNGREKELVFVNWGMH-STNLWPRHSAVSKDKPLFLKELRRLWEGQLERVGYGEQNTILLDNHVEKFEGNPVGTCVVVPEYEDGAEPEDGVLSLEGELVGHLRRMA 346
            L+ILDLNGVL NR    D  R G  G        +RP CD+F+ FC  HF V  WSC + + +EME+F+     ++F  W    STN WPR S VS+ KPLFLK+L  +W     R  +   NT+LLDNH EKFE NPV TCV+VP+++  A+  D +LS  G+    L + A
Sbjct: 2855 LIILDLNGVLVNRPNFKDRGRHGPSG--SRPTFTRRPFCDEFIHFCMEHFHVGVWSCGKSQNMEMELFDAYPGRVLF-QWDQEKSTNEWPRRSVVSEAKPLFLKDLNNIWSAFEGR--FTAANTLLLDNHAEKFERNPVATCVLVPDFD--AQHPDNILSPTGDFCRALAQYA 3020
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BLAST of NO08G01740 vs. NCBI_GenBank
Match: XP_019194960.1 (PREDICTED: uncharacterized FCP1 homology domain-containing protein C1271.03c-like isoform X2 [Ipomoea nil])

HSP 1 Score: 110.2 bits (274), Expect = 1.500e-20
Identity = 71/189 (37.57%), Postives = 98/189 (51.85%), Query Frame = 0 
Query:  171 RRKLLILDLNGVLFNRYPVGDA--RREGGRGGWEGGRVIKRPGCDDFLEFCFAHFDVAAWSCCRKETLE--MEIFNGREKELVFVNWGMHSTNLWPRHSAVSKDKPLFLKELRRLWEGQLERVG------YGEQNTILLDNHVEKFEGNPVGTCVVVPEYEDGAEPEDGVLSLEGELVGHLRRMAVAPE 350
            RRKL+ILD+NG+L      GD   RR  G   + GG +IKRP CDDFL FCF  FDV  WS   K+ L+  ++   G +K+ +   W M +       +  +K KPL LKELR++WE +   +       Y E NT+LLD+   K   NPV +  + PE        D  L   G+L  +L  +A A +
Sbjct:   65 RRKLIILDVNGLL------GDVVRRRVPGGASFSGGTIIKRPFCDDFLRFCFDKFDVGIWSSRLKKNLDPIVDYLLGDQKKKLLFCWNMSNCTQTGFKTPENKHKPLVLKELRKIWENEFPNLQWFVKGYYNESNTLLLDDSPYKALLNPVHSS-IFPETFKLMNKNDKALGPGGDLRVYLECLADAED 246
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BLAST of NO08G01740 vs. NCBI_GenBank
Match: XP_019194959.1 (PREDICTED: uncharacterized FCP1 homology domain-containing protein C1271.03c-like isoform X1 [Ipomoea nil])

HSP 1 Score: 105.5 bits (262), Expect = 3.700e-19
Identity = 71/191 (37.17%), Postives = 98/191 (51.31%), Query Frame = 0 
Query:  171 RRKLLILDLNGVLFNRYPVGDA--RREGGRGGWEGG--RVIKRPGCDDFLEFCFAHFDVAAWSCCRKETLE--MEIFNGREKELVFVNWGMHSTNLWPRHSAVSKDKPLFLKELRRLWEGQLERVG------YGEQNTILLDNHVEKFEGNPVGTCVVVPEYEDGAEPEDGVLSLEGELVGHLRRMAVAPE 350
            RRKL+ILD+NG+L      GD   RR  G   + GG   +IKRP CDDFL FCF  FDV  WS   K+ L+  ++   G +K+ +   W M +       +  +K KPL LKELR++WE +   +       Y E NT+LLD+   K   NPV +  + PE        D  L   G+L  +L  +A A +
Sbjct:   65 RRKLIILDVNGLL------GDVVRRRVPGGASFSGGTSEIIKRPFCDDFLRFCFDKFDVGIWSSRLKKNLDPIVDYLLGDQKKKLLFCWNMSNCTQTGFKTPENKHKPLVLKELRKIWENEFPNLQWFVKGYYNESNTLLLDDSPYKALLNPVHSS-IFPETFKLMNKNDKALGPGGDLRVYLECLADAED 248
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BLAST of NO08G01740 vs. NCBI_GenBank
Match: XP_024442530.1 (uncharacterized protein LOC18105757 [Populus trichocarpa] >XP_024442531.1 uncharacterized protein LOC18105757 [Populus trichocarpa] >PNT00637.1 hypothetical protein POPTR_015G059000v3 [Populus trichocarpa])

HSP 1 Score: 103.2 bits (256), Expect = 1.900e-18
Identity = 72/220 (32.73%), Postives = 103/220 (46.82%), Query Frame = 0 
Query:  148 EVRVKSVERPLGGKPKVELVLVPR-------------RKLLILDLNGVLFNRYPVGDARREGGRGGWEGGRVIKRPGCDDFLEFCFAHFDVAAWSCCRKETLE--MEIFNGREKELVFVNWGMHSTNLWPRHSAVSKDKPLFLKELRRLWEG-----QLERVGYGEQNTILLDNHVEKFEGNPVGTCVVVPEYEDGAEPEDGVLSLEGELVGHLRRMAVA 348
            E ++  +   +G +  V+ V +P+             +KLLILD+NG+L +      A  +       G  V KRP CDDFL FCF  FDV  WS   K  +   +E   G  +  +   W           +  ++ KPLFLKEL+++WE      QL +  Y E NT+LLD+   K   NPV T +  P Y    +  D  L  EG+L  +L R+A A
Sbjct:  190 ESKITEIRNSVGVEASVKEVKIPQACALERPHTGRVTKKLLILDVNGLLADIVSYVSAGYQANI-VVSGKSVFKRPFCDDFLRFCFEKFDVGVWSSRTKRNVNPLIEFLFGDSRHKLLFCWDQSHCTDTGFTTVENRSKPLFLKELKKIWEYLESTLQLNKGEYDESNTLLLDDSPYKALCNPVHTAIFPPSY-GYRDLADSSLGPEGDLRVYLERLAEA 407
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BLAST of NO08G01740 vs. NCBI_GenBank
Match: XP_004956285.1 (uncharacterized protein LOC101758718 [Setaria italica])

HSP 1 Score: 102.1 bits (253), Expect = 4.100e-18
Identity = 67/206 (32.52%), Postives = 105/206 (50.97%), Query Frame = 0 
Query:  150 RVKSVERPLGGKPKVELVLVPRRKLLILDLNGVLFN-RYPVGDARREGGRGGWEGGRVIKRPGCDDFLEFCFAHFDVAAWSCCRKETLE--MEIFNGREKELVFVNWGMHSTNLWPRHSAVSKDKPLFLKELRRLWEGQ-----LERVGYGEQNTILLDNHVEKFEGNPVGTCVVVPEYEDGAEPEDGVLSLEGELVGHLRRMAVA 348
            ++KS+  P G      LV   R+KLLILDLNG+L +      +A +   +    G  V +RP CDDFL FCF +F++  WS  ++E ++  ++I     K  +   W M    +   ++  +K KPL LKEL++LW  +      E+  +   NT+L+D+   K   NP  T +    Y    E +D  L  +G+L  +L R+A A
Sbjct:  361 KIKSIYSPRG-----SLVRFQRKKLLILDLNGLLADINQDTHNAHKAHAK--VRGKLVFRRPYCDDFLRFCFENFELGIWSSRKRENVDSVVDILMRNLKPYLLFCWDMSHCTVTGCNTIDNKHKPLVLKELKKLWNKEEPTLPWEQGEFSPSNTLLVDDSPYKALRNPPNTAIFPQPYSYRNERDDYSLGPDGDLRIYLERIASA 559
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BLAST of NO08G01740 vs. NCBI_GenBank
Match: KQL23717.1 (hypothetical protein SETIT_030027mg [Setaria italica])

HSP 1 Score: 102.1 bits (253), Expect = 4.100e-18
Identity = 67/206 (32.52%), Postives = 105/206 (50.97%), Query Frame = 0 
Query:  150 RVKSVERPLGGKPKVELVLVPRRKLLILDLNGVLFN-RYPVGDARREGGRGGWEGGRVIKRPGCDDFLEFCFAHFDVAAWSCCRKETLE--MEIFNGREKELVFVNWGMHSTNLWPRHSAVSKDKPLFLKELRRLWEGQ-----LERVGYGEQNTILLDNHVEKFEGNPVGTCVVVPEYEDGAEPEDGVLSLEGELVGHLRRMAVA 348
            ++KS+  P G      LV   R+KLLILDLNG+L +      +A +   +    G  V +RP CDDFL FCF +F++  WS  ++E ++  ++I     K  +   W M    +   ++  +K KPL LKEL++LW  +      E+  +   NT+L+D+   K   NP  T +    Y    E +D  L  +G+L  +L R+A A
Sbjct:  136 KIKSIYSPRG-----SLVRFQRKKLLILDLNGLLADINQDTHNAHKAHAK--VRGKLVFRRPYCDDFLRFCFENFELGIWSSRKRENVDSVVDILMRNLKPYLLFCWDMSHCTVTGCNTIDNKHKPLVLKELKKLWNKEEPTLPWEQGEFSPSNTLLVDDSPYKALRNPPNTAIFPQPYSYRNERDDYSLGPDGDLRIYLERIASA 334
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BLAST of NO08G01740 vs. NCBI_GenBank
Match: OWM83724.1 (hypothetical protein CDL15_Pgr004154 [Punica granatum] >PKI55547.1 hypothetical protein CRG98_024047 [Punica granatum])

HSP 1 Score: 102.1 bits (253), Expect = 4.100e-18
Identity = 71/187 (37.97%), Postives = 94/187 (50.27%), Query Frame = 0 
Query:  169 VPRRKLLILDLNGVLFNRYPVGDARREGGRGGWEGGRVIKRPGCDDFLEFCFAHFDVAAWSCCRKETLEMEI---FNGREKELVFVNWGMHSTNLWPRHSAVSKDKPLFLKELRRLWEG-----QLERVGYGEQNTILLDNHVEKFEGNPVGTCVVVPEYEDGAEPEDGVLSLEGELVGHLRRMAVA 348
            V R+KLLILDLNG+L +  P    RR+       G  V KRP   DFL+FCF  F VA WS   K+ +++ I   F    ++LVF  W           +  +KDKPL LKELRR+WE        E+  Y E NT+LLD+   K   NP  T +    Y+      D  L   G+L  +L  +A+A
Sbjct:  722 VSRKKLLILDLNGLLVDVVPSFRGRRKPDM-LLSGKYVFKRPFIKDFLQFCFERFAVAIWSSRTKKNIDLLINFLFGDSREKLVFC-WHQSQCTQTKFTTIENKDKPLVLKELRRVWEKLEPALPWEKGEYNESNTLLLDDSPYKALRNPENTAIFPYSYQHNMR-GDNSLGPGGDLRVYLENIALA 905
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BLAST of NO08G01740 vs. NCBI_GenBank
Match: XP_021893258.1 (uncharacterized protein LOC110811159 isoform X1 [Carica papaya])

HSP 1 Score: 100.9 bits (250), Expect = 9.200e-18
Identity = 70/186 (37.63%), Postives = 94/186 (50.54%), Query Frame = 0 
Query:  171 RRKLLILDLNGVLFNRYP-VGDARREGGRGGWEGGRVIKRPGCDDFLEFCFAHFDVAAWSCCRKETLEMEI---FNGREKELVFVNWGMHSTNLWPRHSAVSKDKPLFLKELRRLWE-----GQLERVGYGEQNTILLDNHVEKFEGNPVGTCVVVPEYEDGAEPEDGVLSLEGELVGHLRRMAVA 348
            +RKLL+LDLNG+L +  P V    R   R    G  V KRP C+DFL FCF  FDV  WS   K+ ++  +   F   + +L+F  W           +  +KDKPL LKEL+ LWE       L    Y E NT+L+D+   K   NP  T +    Y+   +  D  L  EG+L  +L R+AVA
Sbjct:  545 KRKLLVLDLNGLLADIVPYVPYGYRPYAR--VSGKSVFKRPSCEDFLAFCFKRFDVGIWSSRLKKNVDSLVHILFRDTQHKLLFC-WDASHCTRTGLQTIDNKDKPLVLKELKVLWEYLGHHPSLVNQEYNESNTLLVDDSPYKALRNPAHTGLFPYSYQ-YKDVRDSSLGPEGDLRLYLERLAVA 726
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BLAST of NO08G01740 vs. NCBI_GenBank
Match: XP_021893259.1 (uncharacterized protein LOC110811159 isoform X2 [Carica papaya])

HSP 1 Score: 100.9 bits (250), Expect = 9.200e-18
Identity = 70/186 (37.63%), Postives = 94/186 (50.54%), Query Frame = 0 
Query:  171 RRKLLILDLNGVLFNRYP-VGDARREGGRGGWEGGRVIKRPGCDDFLEFCFAHFDVAAWSCCRKETLEMEI---FNGREKELVFVNWGMHSTNLWPRHSAVSKDKPLFLKELRRLWE-----GQLERVGYGEQNTILLDNHVEKFEGNPVGTCVVVPEYEDGAEPEDGVLSLEGELVGHLRRMAVA 348
            +RKLL+LDLNG+L +  P V    R   R    G  V KRP C+DFL FCF  FDV  WS   K+ ++  +   F   + +L+F  W           +  +KDKPL LKEL+ LWE       L    Y E NT+L+D+   K   NP  T +    Y+   +  D  L  EG+L  +L R+AVA
Sbjct:  511 KRKLLVLDLNGLLADIVPYVPYGYRPYAR--VSGKSVFKRPSCEDFLAFCFKRFDVGIWSSRLKKNVDSLVHILFRDTQHKLLFC-WDASHCTRTGLQTIDNKDKPLVLKELKVLWEYLGHHPSLVNQEYNESNTLLVDDSPYKALRNPAHTGLFPYSYQ-YKDVRDSSLGPEGDLRLYLERLAVA 692
The following BLAST results are available for this feature:
BLAST of NO08G01740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26676.11.100e-8453.05mrna cap guanine-n7 methyltransferase 1-like prote... [more]
GBG33282.11.100e-3145.09mRNA cap guanine-N7 methyltransferase [Aurantiochy... [more]
XP_019194960.11.500e-2037.57PREDICTED: uncharacterized FCP1 homology domain-co... [more]
XP_019194959.13.700e-1937.17PREDICTED: uncharacterized FCP1 homology domain-co... [more]
XP_024442530.11.900e-1832.73uncharacterized protein LOC18105757 [Populus trich... [more]
XP_004956285.14.100e-1832.52uncharacterized protein LOC101758718 [Setaria ital... [more]
KQL23717.14.100e-1832.52hypothetical protein SETIT_030027mg [Setaria itali... [more]
OWM83724.14.100e-1837.97hypothetical protein CDL15_Pgr004154 [Punica grana... [more]
XP_021893258.19.200e-1837.63uncharacterized protein LOC110811159 isoform X1 [C... [more]
XP_021893259.19.200e-1837.63uncharacterized protein LOC110811159 isoform X2 [C... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL106nonsL106Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR139ngnoR139Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G01740.1NO08G01740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G01740.1NO08G01740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G01740 ID=NO08G01740|Name=NO08G01740|organism=Nannochloropsis oceanica|type=gene|length=1176bp
ATGGGAGGAGGACGAGGACCTGATGATGGATCAAGGAAAGGGAAGGCCAA
CAGCAACAGCAGCTGCAGTGAAGAGGGAGGAGAGGGAGGGAGGCAGGATC
GAAGGAACATGTGGGTTATTGCGGCGCGGAGTGGATCTGCCCTTAGACGA
GGTGGAGGTCGGGGGGAGGGAGGGAGGGAGGGAGGGCGGGTGTACCAAGG
GGCCGTGTATGCGGCGCATGAAGTGCACGGAATATTTATTTACTTTGGAA
TGGTAGTGAAAGAGGAGAGGGAGGGGAGAGACGGAGGGGTAGAAGGAGGA
GCCATTAGATTTTTTGAGGCCAGCGGGCGAATAACGCGAAGCGGATTGCC
GGCATTAGTGTTGGAGGACCTCGAAAAAAAGGCGGAGGAGGGGAGGAGGG
GAGGGAGGGAGGGAGGAGGGATAAGGAGGGAAACTTTGGTGGAGGTGAGG
GTGAAGAGCGTGGAGAGGCCGTTGGGGGGAAAACCGAAGGTGGAGCTGGT
GCTGGTCCCGAGGAGGAAGTTGCTGATATTGGACTTGAATGGGGTGTTAT
TTAATCGCTACCCCGTGGGGGATGCTCGACGGGAAGGAGGAAGAGGAGGT
TGGGAGGGAGGACGGGTGATAAAACGGCCGGGTTGCGACGATTTCTTGGA
GTTTTGTTTCGCGCACTTTGATGTGGCGGCTTGGAGCTGCTGTAGGAAGG
AGACGCTGGAGATGGAGATTTTCAACGGGAGAGAGAAAGAGTTGGTGTTT
GTGAACTGGGGCATGCACAGCACGAATTTATGGCCGAGACACTCGGCGGT
TAGTAAAGACAAGCCTTTATTTCTGAAAGAACTGAGGCGGTTGTGGGAGG
GACAGCTGGAGAGGGTAGGGTATGGGGAGCAGAACACGATTTTGCTCGAC
AACCACGTGGAGAAGTTCGAGGGGAATCCAGTGGGGACGTGCGTGGTGGT
GCCCGAGTACGAGGACGGGGCCGAGCCGGAAGACGGGGTGTTGAGCTTGG
AGGGGGAGCTCGTCGGGCACCTGCGACGGATGGCGGTGGCGCCCGAGGGG
GGGAGAGGGGAGGAGGGGGGGGGGGGAGTGCGGGATATGTGCGGAGGACG
AAAAGTGTTTATTTCCCGGAGAAGCACCCAGATCCGCCGGTGGACGTGGC
GGCCATGGTCAAGGAGGAGGTGTTGA
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protein sequence of NO08G01740.1

>NO08G01740.1-protein ID=NO08G01740.1-protein|Name=NO08G01740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=392bp
MGGGRGPDDGSRKGKANSNSSCSEEGGEGGRQDRRNMWVIAARSGSALRR
GGGRGEGGREGGRVYQGAVYAAHEVHGIFIYFGMVVKEEREGRDGGVEGG
AIRFFEASGRITRSGLPALVLEDLEKKAEEGRRGGREGGGIRRETLVEVR
VKSVERPLGGKPKVELVLVPRRKLLILDLNGVLFNRYPVGDARREGGRGG
WEGGRVIKRPGCDDFLEFCFAHFDVAAWSCCRKETLEMEIFNGREKELVF
VNWGMHSTNLWPRHSAVSKDKPLFLKELRRLWEGQLERVGYGEQNTILLD
NHVEKFEGNPVGTCVVVPEYEDGAEPEDGVLSLEGELVGHLRRMAVAPEG
GRGEEGGGGVRDMCGGRKVFISRRSTQIRRWTWRPWSRRRC*
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Synonyms
Publications