NO08G00700, NO08G00700 (gene) Nannochloropsis oceanica

Overview
NameNO08G00700
Unique NameNO08G00700
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1382
Alignment locationchr8:238236..239617 -

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Properties
Property NameValue
DescriptionKatanin p60 atpase-containing subunit
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:238236..239617 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003959ATPase_AAA_core
IPR003593AAA+_ATPase
Homology
BLAST of NO08G00700 vs. NCBI_GenBank
Match: EWM26552.1 (katanin p60 atpase-containing subunit [Nannochloropsis gaditana])

HSP 1 Score: 643.7 bits (1659), Expect = 3.400e-181
Identity = 325/344 (94.48%), Postives = 336/344 (97.67%), Query Frame = 0
Query:    1 MVCKTSVPRPGNPISRTKEEVTALAQNRHEHALVPNVISPTDIGVTYQEIGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVIYLDEVDSILSSRDQGEDTKYNTITSVKTTFMQEWDGLRTTSDRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQATREDMLHKILSSNRVAPAVNLTSIARRLDGYTGSDIREVCREAVVRIAHEESKKLDEAQGVEVGSLGQRLRPVEKADFDAALEKLSASVAARGRELERVREWNNQFGEVRKKVRPPHMSMYV 345
            MVCKTSVPRPG P+SRTKEEVTALAQNRHEHALV NVISP DIGVTY EIGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCV+YLDEVDSILSSRDQGEDTKYNTITSVKTTFMQEWDGLRTT+DRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQ TREDML KIL++NR+AP VNLTSIA+RL+GYTGSDIREVCREAVVRIAHEESKKLD+AQGVEVG+LGQRLRPVEKADFDAALEKLSASVAARGRELERVREWNN FGEVRKKV+PPHMSMYV
Sbjct:  393 MVCKTSVPRPGVPVSRTKEEVTALAQNRHEHALVGNVISPADIGVTYGEIGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVVYLDEVDSILSSRDQGEDTKYNTITSVKTTFMQEWDGLRTTNDRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQKTREDMLQKILANNRIAPEVNLTSIAKRLEGYTGSDIREVCREAVVRIAHEESKKLDDAQGVEVGALGQRLRPVEKADFDAALEKLSASVAARGRELERVREWNNLFGEVRKKVQPPHMSMYV 736          
BLAST of NO08G00700 vs. NCBI_GenBank
Match: CBN73875.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 466.5 bits (1199), Expect = 7.300e-128
Identity = 245/352 (69.60%), Postives = 290/352 (82.39%), Query Frame = 0
Query:    2 VCKTSVPRPGNPISRTKEEVTALAQ-NRHEHALVPNVISPTDIGVTYQEIGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPP-GTGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVIYLDEVDSILSSRDQGEDTKYNTITSVKTTFMQEWDGLRTTSDRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQATREDMLHKILSSNRVAPAVNLTSIARRLDGYTGSDIREVCREAVVRIAHEESKKLDEA--QGV-EVGSLGQRLRPVEKADFDAALEKLSASVAARGRELERVREWNNQFGEVRKKVRPP----HMSMYV 345
            VCK  VPRPG P+SRT+EEVTALAQ +RHE ALV NVI P DIGVTY  IGGL   KE LRQC+TYPLRFPHLYSEGIA ++VKGVLLFGPP G G+TMLAKAVATEGGATFLSVDASVIE+KWLGESEKNA+AVFTLARRLAPCVI++DEVDS+LSSR++ +DT + T+TSVKTT MQEWDGLRT  DRV+V+ASTNRP+ LD+AVLRR+PRRILVDLPD  TRE++L   ++ NRV  +VN T+I   L+G+TGSDI+EVCREAVVRIAHE++++LD A   GV E   L  +LRPV   DF  A +KL+ASV+ +GREL RV EWN ++GEV+KK RP     H+SMY+
Sbjct:    8 VCKAYVPRPGQPMSRTREEVTALAQHDRHEQALVTNVILPKDIGVTYDMIGGLGGAKELLRQCITYPLRFPHLYSEGIAKEAVKGVLLFGPPGGRGRTMLAKAVATEGGATFLSVDASVIENKWLGESEKNARAVFTLARRLAPCVIFIDEVDSVLSSREKYDDTTHGTLTSVKTTLMQEWDGLRTGGDRVVVIASTNRPFDLDEAVLRRLPRRILVDLPDAETREEILKVSMAQNRVDASVNFTAITEELEGFTGSDIKEVCREAVVRIAHEKAQELDRAGVNGVREEVDLTAQLRPVTMDDFWEARKKLTASVSEKGRELSRVWEWNEEYGEVKKK-RPDASAHHLSMYL 358          
BLAST of NO08G00700 vs. NCBI_GenBank
Match: CEL97961.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 453.8 bits (1166), Expect = 4.900e-124
Identity = 223/358 (62.29%), Postives = 284/358 (79.33%), Query Frame = 0
Query:    7 VPRPGNPISRTKEEVTALAQNRHEHALVPNVISPTDIGVTYQEIGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVIYLDEVDSILSSRDQGEDTKYNTITSVKTTFMQEWDGLRTTSDRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQATREDMLHKILSSNRVAPAVNLTSIARRLDGYTGSDIREVCREAVVRIAHEESKKLDE---------------AQGVEVGSLGQRLRPVEKADFDAALEKLSASVAARGRELERVREWNNQFGEVRKKVR-----PPHMSMYV 345
            VPRPG P+ R++EEV +LA N+HE +LV NV+SP DI VTY +IGGL +VKE LR+C+TYPL++PHLY EGIA ++VKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDAS +E+ WLGESEK AKAVFTLAR+LAPCVI+LDEVDS+LSSRD+G+DT + T+TS+KTT MQEWDGLRTT DRV+V+ STNRP+ALD+AVLRRMPRRILVDLPD  TRE++L   LS+NR+AP VN+T +A +++GYTGSDI+EVCR+ V +I+HE++++L+                  G +  +    LRPV   D   A++KLSASV   GRELER+ EWN+++GE+++K       P H+S+Y+
Sbjct:  833 VPRPGEPVVRSREEVASLASNKHEKSLVANVVSPQDIHVTYDQIGGLEEVKELLRECITYPLKYPHLYQEGIAEEAVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASSVENMWLGESEKMAKAVFTLARKLAPCVIFLDEVDSLLSSRDRGDDTTHGTLTSLKTTLMQEWDGLRTTRDRVVVIGSTNRPFALDEAVLRRMPRRILVDLPDNKTREEILRVTLSNNRLAPDVNVTDLALQMEGYTGSDIKEVCRDGVTKISHEQARQLESHLRKEGNVPSAPASGVMGDQAIASPTELRPVTADDLKQAMKKLSASVNQSGRELERMWEWNDKYGEIKRKAMKRKPWPNHLSVYL 1190          
BLAST of NO08G00700 vs. NCBI_GenBank
Match: GAX13425.1 (hypothetical protein FisN_34Lh023 [Fistulifera solaris])

HSP 1 Score: 443.4 bits (1139), Expect = 6.700e-121
Identity = 233/352 (66.19%), Postives = 282/352 (80.11%), Query Frame = 0
Query:    6 SVPRPGNPISRTKEEVTALAQNRHEHALVPNVISPTDIGVTYQEIGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVIYLDEVDSILSSRD-QGEDTKYNTITSVKTTFMQEWDGLRT----TSDRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQATREDMLHKILSSNRVAPAVNLTSIARRLDGYTGSDIREVCREAVVRIAHEESKKLDEA-QGV----EVGSLGQRLRPVEKADFDAALEKLSASVAARGRELERVREWNNQFGEVRK--KVRPPHM-SMYV 345
            S+   G    RT+EE+TALAQ++HE AL+  V+SP DIGVTY  IGGL++VKE LRQ +TYPL++PHLYSEGIA ++VKGVLLFGPPGTGKTMLAKAVATEGGA+FLSVDAS +E+KWLGESEKNAKAVFTLARRLAPCVI++DEVDS+LSSR+   +D+ + T+TSVKTT M EWDGL +    + DRV+V+ STNRP+ LD+AVLRR PRRILVDLPD  TR ++L   L+ NR+ PAVN T IA RL+GYTGSDI+EVCREAVV+I+HE++K+LDE  QGV     VGSL QRLRPV   DF+ AL KL  SV+  GREL RV EWN ++GEV+K  K   PH+ SMY+
Sbjct:  938 SLSGAGTVAHRTREEITALAQDKHERALISQVVSPQDIGVTYDMIGGLSEVKELLRQSITYPLKYPHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGASFLSVDASSVENKWLGESEKNAKAVFTLARRLAPCVIFIDEVDSLLSSREGSSDDSAHGTLTSVKTTMMSEWDGLNSGTNGSGDRVVVIGSTNRPFDLDEAVLRRFPRRILVDLPDLKTRSEILEVTLAENRIDPAVNFTKIAERLEGYTGSDIKEVCREAVVQISHEQAKQLDEGLQGVRMDTSVGSL-QRLRPVTMEDFEKALSKLKRSVSENGRELARVWEWNAEYGEVKKMDKNHLPHLASMYL 1288          
BLAST of NO08G00700 vs. NCBI_GenBank
Match: GAX11255.1 (hypothetical protein FisN_34Hh023 [Fistulifera solaris])

HSP 1 Score: 442.6 bits (1137), Expect = 1.100e-120
Identity = 237/365 (64.93%), Postives = 289/365 (79.18%), Query Frame = 0
Query:    1 MVCK-TSVPRPGNPIS-------RTKEEVTALAQNRHEHALVPNVISPTDIGVTYQEIGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVIYLDEVDSILSSRD-QGEDTKYNTITSVKTTFMQEWDGLRT----TSDRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQATREDMLHKILSSNRVAPAVNLTSIARRLDGYTGSDIREVCREAVVRIAHEESKKLDEA-QGV----EVGSLGQRLRPVEKADFDAALEKLSASVAARGRELERVREWNNQFGEVRK--KVRPPHM-SMYV 345
            MVC+ +S P  G  +S       RT+EE+TALAQ++HE AL+  V+SP DIGVTY  IGGL++VKE LRQ +TYPL++PHLYSEGIA ++VKGVLLFGPPGTGKTMLAKAVATEGGA+FLSVDAS +E+KWLGESEKNAKAVFTLARRLAPCVI++DEVDS+LSSR+   +D+ + T+TSVKTT M EWDGL +    + DRV+V+ STNRP+ LD+AVLRR PRRILVDLPD  TR ++L   L+ NR+ PAVN T IA RL+GYTGSDI+EVCREAVV+I+HE++K+LDE  QGV     VGSL QRLRPV   DF+ AL KL  SV+  GREL RV EWN ++GEV+K  K   PH+ +MY+
Sbjct:  922 MVCRISSSPSGGLSLSGAGTVAHRTREEITALAQDKHERALISQVVSPQDIGVTYDMIGGLSEVKELLRQSITYPLKYPHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGASFLSVDASSVENKWLGESEKNAKAVFTLARRLAPCVIFIDEVDSLLSSREGSSDDSAHGTLTSVKTTMMSEWDGLNSGTNGSGDRVVVIGSTNRPFDLDEAVLRRFPRRILVDLPDLKTRSEILEVTLAENRIDPAVNFTKIAERLEGYTGSDIKEVCREAVVQISHEQAKQLDEGLQGVRMDTSVGSL-QRLRPVTVEDFEKALSKLKRSVSENGRELARVWEWNAEYGEVKKMDKDHLPHLANMYL 1285          
BLAST of NO08G00700 vs. NCBI_GenBank
Match: EJK76019.1 (hypothetical protein THAOC_02237 [Thalassiosira oceanica])

HSP 1 Score: 428.3 bits (1100), Expect = 2.200e-116
Identity = 220/348 (63.22%), Postives = 272/348 (78.16%), Query Frame = 0
Query:   16 RTKEEVTALAQNRHEHALVPNVISPTDIGVTYQEIGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVIYLDEVDSILSSRD-QGEDTKYNTITSVKTTFMQEWDGLRT--------TSDRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQATREDMLHKILSSNRVAPAVNLTSIARRLDGYTGSDIREVCREAVVRIAHEESKKLDEAQGVEVGSLG---------QRLRPVEKADFDAALEKLSASVAARGRELERVREWNNQFGEVRKKVR---PPHMSM 343
            RT+E++ ALAQ++HE ALVPN +SP DIGVTY  IGGL +VKE LRQ +TYPL+FPHLYSEGIA ++VKGVLLFGPPGTGKTMLAKAVATEGGA+FLSVDAS +E+KWLGESEKNAKAVFTLARRLAPCV+++DEVDS+LSSR+   +D+ + T+TSVKTT M EWDGL +         SDRV+V+ STNRP+ LD+AVLRR PRRILVDLPD  TR ++L   LS NR+   VNLT IA RLDGYTGSD++EVCREAVV+I+HE+++ LD  + ++    G         Q LRPV   DF++A+ KL  SV+  GREL +V EWN+++GE++KK R   PP M+M
Sbjct: 1385 RTREDLMALAQDKHERALVPNCVSPRDIGVTYDMIGGLGEVKELLRQSITYPLKFPHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGASFLSVDASSVENKWLGESEKNAKAVFTLARRLAPCVVFIDEVDSLLSSREGSSDDSAHGTLTSVKTTMMSEWDGLNSGTNGKGDGGSDRVVVIGSTNRPFDLDEAVLRRFPRRILVDLPDLETRREILEVTLSENRLGGDVNLTLIAERLDGYTGSDLKEVCREAVVQISHEQARMLDRGEILDEDDEGYVDTSGAGFQMLRPVTMKDFESAMRKLKRSVSETGRELAKVWEWNDEYGEMKKKRRDLLPPMMNM 1732          
BLAST of NO08G00700 vs. NCBI_GenBank
Match: XP_002286946.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED96587.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 421.0 bits (1081), Expect = 3.500e-114
Identity = 213/333 (63.96%), Postives = 264/333 (79.28%), Query Frame = 0
Query:   16 RTKEEVTALAQNRHEHALVPNVISPTDIGVTYQEIGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVIYLDEVDSILSSRD-QGEDTKYNTITSVKTTFMQEWDGLRT--------TSDRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQATREDMLHKILSSNRVAPAVNLTSIARRLDGYTGSDIREVCREAVVRIAHEESKKLDEAQGVE---------VGSLGQRLRPVEKADFDAALEKLSASVAARGRELERVREWNNQFGE 331
            R+KE++ ALAQ++HE AL+PN +SP DIGVTY  IGGL DVKE LRQ +TYPL+FPHLYSEGIA ++VKGVLL+GPPGTGKTMLAKAVATEGGA+FLSVDAS +E+KWLGESEKNAKAVFTLARRLAPCVI++DEVDS+LSSR+   +D+ + T+TSVKTT M EWDGL +         SDRV+V+ STNRP+ LD+AVLRR PRRILVDLPD  TR ++L   LS NR+   VNLT IA RL+GYTGSD++EVCREAVV+I+HE+++ LD  + ++          G+  Q LRPV   DF++A+ KL  SV+  GREL+RV EWN+++GE
Sbjct:   12 RSKEDLMALAQDKHERALIPNCVSPNDIGVTYDMIGGLTDVKELLRQSITYPLKFPHLYSEGIAREAVKGVLLYGPPGTGKTMLAKAVATEGGASFLSVDASSVENKWLGESEKNAKAVFTLARRLAPCVIFIDEVDSLLSSREGSSDDSAHGTLTSVKTTMMSEWDGLNSGTNGKGDAGSDRVVVIGSTNRPFDLDEAVLRRFPRRILVDLPDLETRREILEVTLSENRLGSDVNLTMIAERLEGYTGSDLKEVCREAVVQISHEQARMLDRGELLDDSDDETDGFTGAGFQMLRPVTMKDFESAMRKLKRSVSETGRELQRVWEWNDEYGE 344          
BLAST of NO08G00700 vs. NCBI_GenBank
Match: XP_002177425.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC51888.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 418.3 bits (1074), Expect = 2.300e-113
Identity = 218/338 (64.50%), Postives = 269/338 (79.59%), Query Frame = 0
Query:   24 LAQNRHEHALVPNVISPTDIGVTYQEIGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVIYLDEVDSILSSRD-QGEDTKYNTITSVKTTFMQEWDGLRT--------TSDRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQATREDMLHKILSSNRVAPAVNLTSIARRLDGYTGSDIREVCREAVVRIAHEESKKLDEA-----QGVEVGSLGQRLRPVEKADFDAALEKLSASVAARGRELERVREWNNQFGEVR--KKVRPPHM-SMYV 345
            LAQ++HE AL+  V+SP DIGVTY  IGGL +VKE LRQ +TYPL+FPHLYSEGIA ++VKGVLLFGPPGTGKTMLAKAVATEGGA+FLSVDAS +E+KWLGESEKNAKAVFTLARRLAPCVI++DEVDS+LSSR+   +D+ + T+TSVKTT M EWDGL +         S+RV+V+ STNRP+ LD+AVLRR PRRILVDLPD  TR ++L   L+ NR+ P VNLT IA RL+GYTGSDI+EVCREAVV+I+HE+++ LD+      + +  GSL QRLRPV   DF+ AL KL  SV+ +GREL RV EWN+++GE++  KK   PH+ +MY+
Sbjct:    1 LAQDKHERALISQVVSPQDIGVTYDMIGGLNEVKELLRQSITYPLKFPHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGASFLSVDASSVENKWLGESEKNAKAVFTLARRLAPCVIFVDEVDSLLSSREGTSDDSAHGTLTSVKTTMMSEWDGLNSGTNGSGEAGSERVVVIGSTNRPFDLDEAVLRRFPRRILVDLPDLETRTEILEVTLAENRLDPEVNLTQIAERLEGYTGSDIKEVCREAVVQISHEQARLLDQGFMNTREDMTQGSL-QRLRPVTAEDFETALNKLKRSVSEKGRELARVWEWNDEYGEIKKEKKNHLPHLANMYL 337          
BLAST of NO08G00700 vs. NCBI_GenBank
Match: OEU16619.1 (AAA-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 385.2 bits (988), Expect = 2.200e-103
Identity = 200/309 (64.72%), Postives = 250/309 (80.91%), Query Frame = 0
Query:   50 IGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVIYLDEVDSILSSRD-QGEDTKYNTITSVKTTFMQEWDGLRT----TSDRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQATREDMLHKILSSNRVAPAVNLTSIARRLDGYTGSDIREVCREAVVRIAHEESKKLDEA-----QGVEVGSLGQRLRPVEKADFDAALEKLSASVAARGRELERVREWNNQFGEVRKKVRP---PH-MSMYV 345
            +GGL +VKE LRQ +TYPL+FPHLYSEGIA ++VKGVLLFGPPGTGKTMLAKAVATEGGA+FLSVDAS +E+KWLGESEKNAKAVFTLARRLAPCV+++DEVDS+LSSR+   +D+ + T+TSVKTT M EWDGL +    + DRV+V+ STNRP+ LD+AVLRR PRRILVDLPD  TR ++L   L+ NR+  AVNLT IA RL+GYTGSD++EVCREAVV+I+HE+++ LD+      + +  GSL QRLRPV   DF+ A+ KL  SV+ +GREL RV EWN+++GE+ KK +P   PH M+MY+
Sbjct:    2 VGGLTNVKELLRQSITYPLKFPHLYSEGIAREAVKGVLLFGPPGTGKTMLAKAVATEGGASFLSVDASSVENKWLGESEKNAKAVFTLARRLAPCVVFIDEVDSLLSSREGSSDDSAHGTLTSVKTTMMSEWDGLNSGTNGSGDRVVVIGSTNRPFDLDEAVLRRFPRRILVDLPDLETRAEILEVTLAENRLDSAVNLTQIAERLEGYTGSDLKEVCREAVVQISHEQARLLDQGFDNTREDITEGSL-QRLRPVTVNDFETAMGKLKRSVSEKGRELARVWEWNDEYGEI-KKEKPNNLPHLMNMYL 308          
BLAST of NO08G00700 vs. NCBI_GenBank
Match: XP_009040157.1 (hypothetical protein AURANDRAFT_3580, partial [Aureococcus anophagefferens] >EGB05138.1 hypothetical protein AURANDRAFT_3580, partial [Aureococcus anophagefferens])

HSP 1 Score: 379.8 bits (974), Expect = 9.000e-102
Identity = 184/311 (59.16%), Postives = 245/311 (78.78%), Query Frame = 0
Query:   27 NRHEHALVPNVISPTDIGVTYQEIGGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPGTGKTMLAKAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVIYLDEVDSILSSRDQGEDTKYNTITSVKTTFMQEWDGLRTTSDRVIVVASTNRPYALDQAVLRRMPRRILVDLPDQATREDMLHKILSSNRVAPAVNLTSIARRLDGYTGSDIREVCREAVVRIAHEESKKLDEAQGVEVGSLG-QRLRPVEKADFDAALEKLSASVAARGRELERVREWNNQFGEVRKKVR 337
            ++HE AL+ NV++P+D+ VTY  IGGL   K  LR+ +TYPL++P LY EG+A ++ KGVLLFGPPGTGKTMLAKAVATEGGA+FL+VDAS IE+KWLGESEKNAKAVF+LAR+LAPCV++ DE+D++LSSR+ G+DT + T+TSVKTT MQEWDGL+TT DRV+V+ STNRPY LD+AVLRR+PRR+LVDLPD+A+R  +L   L+ NR+  +V+L  +A +L+GY+GSD +EVCREA+     E +   D+ +     +L   +LR    ADF+AA+ KLS+SVA  G E+ +V EWN Q+GEV+K+ +
Sbjct:    1 DKHEKALLGNVVAPSDVAVTYDMIGGLDAAKTALREAITYPLKYPALYEEGVAREACKGVLLFGPPGTGKTMLAKAVATEGGASFLAVDASAIENKWLGESEKNAKAVFSLARKLAPCVVFFDEIDAVLSSREGGDDTSHGTLTSVKTTLMQEWDGLKTTRDRVVVIGSTNRPYDLDEAVLRRLPRRVLVDLPDKASRRAILDVTLARNRLDASVDLDGVAAKLEGYSGSDCKEVCREAIHADELEATALTDDLKAKCAAALDPPKLREARAADFEAAIAKLSSSVADSGPEMAKVLEWNAQYGEVKKRTK 311          
The following BLAST results are available for this feature:
BLAST of NO08G00700 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM26552.13.400e-18194.48katanin p60 atpase-containing subunit [Nannochloro... [more]
CBN73875.17.300e-12869.60conserved unknown protein [Ectocarpus siliculosus][more]
CEL97961.14.900e-12462.29unnamed protein product [Vitrella brassicaformis C... [more]
GAX13425.16.700e-12166.19hypothetical protein FisN_34Lh023 [Fistulifera sol... [more]
GAX11255.11.100e-12064.93hypothetical protein FisN_34Hh023 [Fistulifera sol... [more]
EJK76019.12.200e-11663.22hypothetical protein THAOC_02237 [Thalassiosira oc... [more]
XP_002286946.13.500e-11463.96predicted protein, partial [Thalassiosira pseudona... [more]
XP_002177425.12.300e-11364.50predicted protein, partial [Phaeodactylum tricornu... [more]
OEU16619.12.200e-10364.72AAA-domain-containing protein [Fragilariopsis cyli... [more]
XP_009040157.19.000e-10259.16hypothetical protein AURANDRAFT_3580, partial [Aur... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL109nonsL109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR083ncniR083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR141ngnoR141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK008990NSK008990Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO08G00700.1NO08G00700.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|552743gene_3400Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100084g8gene3974Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO08G00700.1NO08G00700.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO08G00700 ID=NO08G00700|Name=NO08G00700|organism=Nannochloropsis oceanica|type=gene|length=1382bp
ATGGTGTGCAAGACCAGCGTGCCGCGCCCGGGGAACCCGATCTCGAGGAC
GAAGGAGGAGGTGACGGCCTTGGCGCAGAACAGGCACGAGCACGCCCTGG
TCCCTAACGTGATCTCCCCGACTGATATTGGTGTGACGTACCAAGAAATC
GGTGGCTTGGCCGATGTGAAGGAGACGCTGAGGCAGTGTGTGACGTACCC
CCTGCGGTTTCCTCATTTGTACAGTGAGGGGATCGCGGCCGACTCGGTCA
AGGGCGTGTTGTTGTTTGGgtgaggagggagggagggagggagggaggga
ggatgtatggacgtatgtcccgtcattcaaagcaacaagtcatctgaaaa
ctcaaccaatcaaaaccaaccctccctcccttcatccatccatccatgcc
tcctttcttccttccattcctcgcttcttctctcgcagACCTCCGGGGAC
GGGCAAAACGATGCTGGCCAAGGCGGTCGCGACCGAGGGAGGGGCGACCT
TCCTCTCGGTGGACGCCTCGGTAATTGAGAGCAAATGGTTGGGGGAGAGC
GAGAAGAACGCTAAGGCCGTTTTTACCCTGGCGCGACGCCTGGCCCCGTG
CGTGATTTATCTGGACGAGGTGGACTCCATTTTGAGCAGTCGGGACCAGG
GGGAAGACACCAAGTACAACACCATTACGAGCGTCAAGACGACCTTCATG
CAGGAGTGGGACGGGCTGCGGACGACGAGCGACCGGGTGATTGTCGTGGC
GAGCACCAACAGGCCTTATGCATTGGACCAGGCGGTGTTGCGGAGAATGC
CAAGGCGGATTTTAGTGGACCTACCCGACCAAGCGACGAGGGAGGATATG
TTGCACAAGgtgagggagaaagaggacgggcaaagacagggggggggggg
gggggggggtcaacaagatttatctagaaagtggaaatctacgtcagcag
caggaacaaaagagattctcctcactctttctttctctccctgtccctcc
tttcctttctccttccgtccttccctcccctcgtcagATTCTCTCTTCCA
ACCGTGTCGCACCCGCCGTGAATCTTACGAGCATCGCGAGGCGTCTAGAC
GGCTACACGGGAAGTGACATCAGGGAGGTTTGCCGCGAGGCAGTCGTGCG
AATCGCGCACGAAGAGAGCAAGAAACTGGATGAGGCACAGGGGGTAGAGG
TAGGGTCATTGGGACAACGGTTAAGGCCCGTGGAAAAAGCTGATTTTGAC
GCGGCGTTGGAGAAATTGAGTGCGTCCGTGGCGGCGAGGGGAAGGGAGCT
GGAGCGGGTAAGGGAGTGGAACAACCAGTTTGGGGAGGTGAGGAAGAAGG
TGAGGCCACCGCATATGTCCATGTATGTGTAG
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protein sequence of NO08G00700.1

>NO08G00700.1-protein ID=NO08G00700.1-protein|Name=NO08G00700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=345bp
MVCKTSVPRPGNPISRTKEEVTALAQNRHEHALVPNVISPTDIGVTYQEI
GGLADVKETLRQCVTYPLRFPHLYSEGIAADSVKGVLLFGPPGTGKTMLA
KAVATEGGATFLSVDASVIESKWLGESEKNAKAVFTLARRLAPCVIYLDE
VDSILSSRDQGEDTKYNTITSVKTTFMQEWDGLRTTSDRVIVVASTNRPY
ALDQAVLRRMPRRILVDLPDQATREDMLHKILSSNRVAPAVNLTSIARRL
DGYTGSDIREVCREAVVRIAHEESKKLDEAQGVEVGSLGQRLRPVEKADF
DAALEKLSASVAARGRELERVREWNNQFGEVRKKVRPPHMSMYV*
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Synonyms
Publications