NO08G00390, NO08G00390 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G00390 vs. NCBI_GenBank
Match: EWM26475.1 (hypothetical protein Naga_100045g21 [Nannochloropsis gaditana]) HSP 1 Score: 364.8 bits (935), Expect = 3.800e-97 Identity = 184/276 (66.67%), Postives = 209/276 (75.72%), Query Frame = 0 Query: 125 AKNSIGDPLQMNEAINKGDLTMAGMNKDKMKG--------------------------------------MDXXXXMGGDSPKAAVDLQQFIGKDTCWPMDIDELQVAVEEGDCPLVILSNPEPDAYMLMEMNEIMVMRHVRILGHPAFLPTIDAMMGMRAFTVMDGGFLELQYVRVRQGMGMYRDRYGLEGREDINSKVLEVKGGGVLLEEGAEGANFVGVIFLAVMTDQGMTERAIQDQLDFTGWRMYGGHVYVTGGTVRFFNCHFWDSMIFMP 363 AKNS+GDPLQ+ A+ GDLT+ G+ K G XXXX G+SP+ A DL +F+GKDTCWP +I ELQ+AVEE DCPLV+L+NP P AYMLM+MNEIMVMRHVR+LGHPA LPTIDAMMGMRAFT+M+GGFLELQYVRVRQGMGMYRDRYGLEGR+DI+SKV E+KGG V+LEEGAEGANFVGVIFLAVMT+Q MTE+AIQDQ+D TGWR+YGGHVYVT GTVRFFNCHFWDSMI MP Sbjct: 108 AKNSVGDPLQIGNAVENGDLTLEGVKKKSGMGDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGNSPRNATDLSKFVGKDTCWPRNIVELQIAVEEADCPLVVLTNPNPMAYMLMDMNEIMVMRHVRVLGHPALLPTIDAMMGMRAFTIMEGGFLELQYVRVRQGMGMYRDRYGLEGRDDISSKVFEIKGGSVMLEEGAEGANFVGVIFLAVMTNQEMTEQAIQDQIDMTGWRIYGGHVYVTAGTVRFFNCHFWDSMILMP 383
BLAST of NO08G00390 vs. NCBI_GenBank
Match: XP_005853964.1 (hypothetical protein NGA_0462000 [Nannochloropsis gaditana CCMP526] >EKU22398.1 hypothetical protein NGA_0462000 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 210.7 bits (535), Expect = 9.200e-51 Identity = 110/193 (56.99%), Postives = 137/193 (70.98%), Query Frame = 0 Query: 170 AAVDLQQFIGKDTCWPMDIDELQVAVEEGDCPLVILSNPEPDAYMLMEMNEIMVMRHVRILGHPAFLPTIDAMMGMRAFTVMDGGFLELQYVRVRQGMGMYRDRYGLEGREDINSKVLEVKGGGVLLEEGAEGANFVGVIFLAVMTDQGMTERAIQDQLDFTGWRMYGGHVYVTGGTVRFFNCHFWDSMIFMP 363 A V+L+ F+G+++CWP D EL AVE C LV+LS+ +PDAY L E +I V R+VR++G+PA LP IDA RAFTV GG LELQ+VRVRQG G RDRYGLEG +S V EV+GG V +E GA GANFVGV F+AV D + AI+DQ+DF G R+YGGHVYV GTV FF C+FWD+ + +P Sbjct: 102 ADVNLKDFVGQNSCWPADGAELLDAVENQGCELVVLSSGDPDAYALDE--DIKVNRYVRVMGNPAVLPQIDAEDAERAFTVGPGGLLELQFVRVRQGGGTVRDRYGLEG-SGSSSVVGEVRGGCVSVEPGALGANFVGVTFIAVANDWDSVQGAIEDQIDFVGGRIYGGHVYVAAGTVNFFGCNFWDTTLLLP 291
BLAST of NO08G00390 vs. NCBI_GenBank
Match: EWM24109.1 (hypothetical protein Naga_100286g5 [Nannochloropsis gaditana]) HSP 1 Score: 210.7 bits (535), Expect = 9.200e-51 Identity = 110/193 (56.99%), Postives = 137/193 (70.98%), Query Frame = 0 Query: 170 AAVDLQQFIGKDTCWPMDIDELQVAVEEGDCPLVILSNPEPDAYMLMEMNEIMVMRHVRILGHPAFLPTIDAMMGMRAFTVMDGGFLELQYVRVRQGMGMYRDRYGLEGREDINSKVLEVKGGGVLLEEGAEGANFVGVIFLAVMTDQGMTERAIQDQLDFTGWRMYGGHVYVTGGTVRFFNCHFWDSMIFMP 363 A V+L+ F+G+++CWP D EL AVE C LV+LS+ +PDAY L E +I V R+VR++G+PA LP IDA RAFTV GG LELQ+VRVRQG G RDRYGLEG +S V EV+GG V +E GA GANFVGV F+AV D + AI+DQ+DF G R+YGGHVYV GTV FF C+FWD+ + +P Sbjct: 121 ADVNLKDFVGQNSCWPADGAELLDAVENQGCELVVLSSGDPDAYALDE--DIKVNRYVRVMGNPAVLPQIDAEDAERAFTVGPGGLLELQFVRVRQGGGTVRDRYGLEG-SGSSSVVGEVRGGCVSVEPGALGANFVGVTFIAVANDWDSVQGAIEDQIDFVGGRIYGGHVYVAAGTVNFFGCNFWDTTLLLP 310
BLAST of NO08G00390 vs. NCBI_GenBank
Match: EWM26075.1 (hypothetical protein Naga_100278g5 [Nannochloropsis gaditana]) HSP 1 Score: 171.8 bits (434), Expect = 4.800e-39 Identity = 91/200 (45.50%), Postives = 124/200 (62.00%), Query Frame = 0 Query: 181 DTCWPMDIDELQVAVEEGDCPLVILSNPEPDAYMLMEMNEIMVMRHVRILGHPAFLPTIDAM---MGMRAFTVMDGGFLELQYVRVRQGMGMYRDR------------YG-LEGRED--INSKVLEVKGGGVLLEEGAEGANFVGVIFLAVMTDQGMTERAIQDQLDFTGWRMYGGHVYVTGGTVRFFNCHFWDSMIFMP 363 D C+P DEL AV+E DC L+ L+N +P AY++ + IMV R +RI+GHP FLP IDA M RAF V++GGFL+LQY+RVR G+G ++R +G G + + K+LE +GG V +E+GA GANF GVIFL+V + AIQ G R YGGH+++ GG+V+F NCHFW + I +P Sbjct: 2 DACYPQTADELVEAVQELDCSLLFLTNSDPQAYLITQ--HIMVDRPIRIVGHPVFLPVIDASTLNMAPRAFRVVEGGFLDLQYIRVRAGVGETKERPVSSNQTQAESAFGETSGTQQVGVTGKILETRGGSVAIEQGASGANFEGVIFLSVANSWESVQEAIQATYTGMGGRTYGGHIFIAGGSVKFTNCHFWTTAILLP 199
BLAST of NO08G00390 vs. NCBI_GenBank
Match: XP_005854372.1 (hypothetical protein NGA_0163600, partial [Nannochloropsis gaditana CCMP526] >EKU21987.1 hypothetical protein NGA_0163600, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 170.6 bits (431), Expect = 1.100e-38 Identity = 91/200 (45.50%), Postives = 124/200 (62.00%), Query Frame = 0 Query: 181 DTCWPMDIDELQVAVEEGDCPLVILSNPEPDAYMLMEMNEIMVMRHVRILGHPAFLPTIDAM---MGMRAFTVMDGGFLELQYVRVRQGMGMYRDR------------YG-LEGRED--INSKVLEVKGGGVLLEEGAEGANFVGVIFLAVMTDQGMTERAIQDQLDFTGWRMYGGHVYVTGGTVRFFNCHFWDSMIFMP 363 D C+P DEL AV+E DC L+ L+N +P AY++ + IMV R +RI+GHP FLP IDA M RAF V++GGFL+LQY+RVR G+G ++R +G G + + K+LE +GG V +E+GA GANF GVIFL+V + AIQ G R YGGH+++ GG+V+F NCHFW + I +P Sbjct: 137 DACYPQTADELVEAVQELDCSLLFLTNFDPQAYLITQ--HIMVDRPIRIVGHPVFLPVIDASTLNMAPRAFRVVEGGFLDLQYIRVRAGVGETKERPVSSNQTQAESAFGETSGTQQVGVTGKILETRGGSVAIEQGASGANFEGVIFLSVANSWESVQEAIQATYTGMGGRTYGGHIFIAGGSVKFTNCHFWTTAILLP 334
BLAST of NO08G00390 vs. NCBI_GenBank
Match: EWM23493.1 (hypothetical protein Naga_100198g12 [Nannochloropsis gaditana]) HSP 1 Score: 114.8 bits (286), Expect = 6.900e-22 Identity = 66/179 (36.87%), Postives = 102/179 (56.98%), Query Frame = 0 Query: 180 KDTCWPMDIDELQVAVEEGDCPLVILSNPEPDAYMLMEMNEIMVMRHVRILGHPAFLPTIDAMMGMRAFTVMDGGFLELQYVRVRQGMGMYRD--RYGLEGREDINSKVLEVKGGGVLLEEGAEGANFVGVIFLAVMTDQGMTERAIQDQLDFTGWRMYGGHVYVTGGTVRFFNCHFWD 357 +D C D EL A+E C +V L +P +E EI+V R V ++G+P+ LP ID +R+F V++GGFL+L++V+ G+ R+ Y + ++V E++GG V ++EGA G F GVIF+ + R+I+ +D +R+YGGHV++ GG V F C FWD Sbjct: 152 EDGCEVNDGLELTDAIENQSCSIVYL---KPGQLYELE-REILVRREVIVMGNPSVLPMIDGEDAIRSFHVLEGGFLDLRFVQQFASDGIVREPKPYEIFATTSPRNRVWEIRGGSVFIDEGALGGKFTGVIFIDDPDVEDAARRSIRRSIDGDVYRIYGGHVFIVGGRVDFVGCLFWD 326
BLAST of NO08G00390 vs. NCBI_GenBank
Match: XP_005852539.1 (hypothetical protein NGA_0727200 [Nannochloropsis gaditana CCMP526] >EKU23293.1 hypothetical protein NGA_0727200 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 113.6 bits (283), Expect = 1.500e-21 Identity = 75/226 (33.19%), Postives = 109/226 (48.23%), Query Frame = 0 Query: 180 KDTCWPMDIDELQVAVEEGDCPLVILSNPEPDAYMLMEMNEIMVMRHVRILGHPAFLPTIDAMMGMRAFTVMDGGFLELQYVRVRQGMGMYRDRYGL------------------------------EGREDINS-------------KVLEVKGGGVLLEEGAEGANFVGVIFLAVMTDQGMTERAIQDQLDFTGWRMYGGHVYVTGGTVRFFNCHFWDSMIFMP 363 +D C + EL+ A+E C +VIL++ EPDAY+L EI++ R V ++G+ LP ID +RAF V+ GGFL+LQ+VR+ G G R R+GL E RE + + +V++++GG V E GA G F G+ F + TD AI+ + G R++GGHV V G V F C F+D + P Sbjct: 149 QDACRVANAGELEDAIERKTCAVVILTSSEPDAYVL--EREIVISRAVVVMGNSVMLPFIDCKDIVRAFRVVPGGFLDLQFVRINIGKGFVRPRWGLFRKQKTRRNLRGEEIILDEEEDDWREPRTKEEREMVRNLQLGGQAADAEPGEVIDIRGGSVYFEPGALGGTFNGIYFTSDQTDVEDIMVAIEQTTNLIGIRIWGGHVLVADGDVSFNACVFYDLELLTP 372
BLAST of NO08G00390 vs. NCBI_GenBank
Match: XP_005854242.1 (hypothetical protein NGA_0025320 [Nannochloropsis gaditana CCMP526] >EKU22122.1 hypothetical protein NGA_0025320 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 98.6 bits (244), Expect = 5.100e-17 Identity = 49/128 (38.28%), Postives = 77/128 (60.16%), Query Frame = 0 Query: 231 GHPAFLPTIDAMMGMRAFTVMDGGFLELQYVRVRQGMGMYRD--RYGLEGREDINSKVLEVKGGGVLLEEGAEGANFVGVIFLAVMTDQGMTERAIQDQLDFTGWRMYGGHVYVTGGTVRFFNCHFWD 357 G+P+ LP ID +R+F V++GGFL+L++V+ G+ R+ Y + ++V E++GG V ++EGA G F GVIF+ + R+I+ +D +R+YGGHV++ GG V F C FWD Sbjct: 84 GNPSVLPMIDGEDAIRSFHVLEGGFLDLRFVQQFASDGIVREPKPYEIFATTSPRNRVWEIRGGSVFIDEGALGGKFTGVIFIDDPDVEDAARRSIRRSIDGDVYRIYGGHVFIVGGRVDFVGCLFWD 211
BLAST of NO08G00390 vs. NCBI_GenBank
Match: XP_005853754.1 (hypothetical protein NGA_0476201 [Nannochloropsis gaditana CCMP526] >EKU22606.1 hypothetical protein NGA_0476201 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 94.0 bits (232), Expect = 1.300e-15 Identity = 63/197 (31.98%), Postives = 98/197 (49.75%), Query Frame = 0 Query: 183 CWPMDIDELQVAV-EEGDCPLVIL------------SNPEPDAYM---LMEMNEIMVMRHVRILGHPAFLPTIDAMMGMRAFTVMDGGFLELQYVRVRQG-MGMYRDRYGLEGREDINSKVLEVKGGGVLLEEGAEGANFVGVIFLAVMTDQGMTERAIQDQLDFTGWRMYGGHVYVTGGTVRFFNCHFWDSMIFMP 363 C+ D++EL A+ ++ +C ++ L N P A + +EI+V + V I G+ LP +D +R F VMDGG+LEL+YVR+ Q G+ R L + V E +G V E GA G F+GV F +D+ T+ ++ T +R+YGG V++ GG ++F C F+D P Sbjct: 173 CFVGDMEELAEALADDSECTVITLVSTSSRDGVSGDGNSIPSAAAQTPFVFRDEILVSKRVIIQGNSVLLPFLDCSQSIRCFRVMDGGYLELRYVRINQSDKGVLRPVNPLYEGFTVTGMVREYRGSSVYFEPGATGGRFLGVYFDDDQSDE--TDWIVEQSFALTSFRIYGGFVFMAGGRLQFELCLFYDFEFVTP 367
BLAST of NO08G00390 vs. NCBI_GenBank
Match: EWM26817.1 (Pectin lyase fold/virulence factor [Nannochloropsis gaditana]) HSP 1 Score: 77.8 bits (190), Expect = 9.300e-11 Identity = 58/177 (32.77%), Postives = 91/177 (51.41%), Query Frame = 0 Query: 177 FIGKDTCWPMDIDELQVAVEEGDCPLVILSNPEPDAYMLMEMNEIMVMRHVRILGHPAFLPTIDAMMGMRAFTVMDGGFLELQYVRVRQGMGMYRDRYGLEGREDINSKVLEVKGGGVLLEEGAEGANFVGVIFLAVMTDQGMTERAIQDQLDFTGWRMYGGHVYVTGGTVRFFNCH 354 +I C P +L+ VE G CP++ L+ P +++ EI V R V I+G P LP IDA + RAF+V G L+L++V+V +G+ M ++ LE++GG + EG EG F G + L + D + + + L T R+YGG + + GT+R +CH Sbjct: 182 YIAVHGCTPDTGVQLRSLVETGSCPVITLT---PGVRYVLD-EEIHVRRAVVIIGRPLTLPVIDAHLIARAFSVEAKGRLDLRFVKVWRGVPM----------AVVDEVYLELRGGVAWIREGGEGV-FTGCLML--VHDDEVGDVLLASDLRVTA-RLYGGFLLLEAGTLRVRDCH 340 The following BLAST results are available for this feature:
BLAST of NO08G00390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 10
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G00390 ID=NO08G00390|Name=NO08G00390|organism=Nannochloropsis oceanica|type=gene|length=1317bpback to top protein sequence of NO08G00390.1 >NO08G00390.1-protein ID=NO08G00390.1-protein|Name=NO08G00390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=439bpback to top Synonyms
Publications
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