NO08G00300, NO08G00300 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G00300 vs. NCBI_GenBank
Match: EWM20142.1 (Amino acid transporter, transmembrane, partial [Nannochloropsis gaditana]) HSP 1 Score: 223.0 bits (567), Expect = 2.100e-54 Identity = 139/243 (57.20%), Postives = 171/243 (70.37%), Query Frame = 0 Query: 1 MPSFTIPSSQWPDDHSQTPHERDQLLSSSDPYSLSASSSLISS-YGGT-AP-----KTVDAPPSGTLGSSILILISSVFGSSILAVPFAFSKCGWFLGTICLIFCGLLTQLGAHFLLESAYLVSSSLAPSSSPRCLAFSDIAARATPRLAFLPNVLVVVNCLGSAVASLVVAGDLMPRTFRDLAILSDHSSLIENANGLLDDYLLHRSLWVSLILLLVLPLCFLRSITPLRYAGLVTCIAVSY 237 MP T P H D S S P L++ S SS YG T AP T +GTL SSILILISSVFGSSIL VPFAFS+CGW LGT+C+IFCGL T+LGAHFLLESA LV +S+ PS + L+F+DIA+ ATPRLAFLP VLV+V CLGSAV++LVVAGD++P T +DLA+L H+S +E+++G +D YLL+R WV+L L+ VLPLCFL SIT L+Y G+VTC+ V Y Sbjct: 1 MPGVTTPGWNIVQPHPGKDPRGD---SESVPGPLTSLISTDSSFYGSTNAPDILRRTTTYQAGTGTLTSSILILISSVFGSSILVVPFAFSQCGWALGTLCMIFCGLFTELGAHFLLESARLV-TSMYPSVNSDALSFADIASHATPRLAFLPTVLVIVTCLGSAVSALVVAGDILPATLQDLALLFHHTSWVEDSDGKVDSYLLNRPTWVTLPLVCVLPLCFLHSITSLQYVGIVTCVTVVY 239
BLAST of NO08G00300 vs. NCBI_GenBank
Match: EWM26496.1 (Amino acid transporter, transmembrane [Nannochloropsis gaditana]) HSP 1 Score: 145.2 bits (365), Expect = 5.500e-31 Identity = 81/117 (69.23%), Postives = 95/117 (81.20%), Query Frame = 0 Query: 57 SGTLGSSILILISSVFGSSILAVPFAFSKCGWFLGTICLIFCGLLTQLGAHFLLESAYLVSSSLAPSSSPRCLAFSDIAARATPRLAFLPNVLVVVNCLGSAVASLVVAGDLMPRTF 174 +GTL SSILILISSVFGSSIL VPFAFS+CGW LGT+C+IFCGL T+LGAHFLLESA LV +S+ PS + L+F+DIA+ ATPRLAFLP VLV+V CLGSAV++L A TF Sbjct: 29 TGTLTSSILILISSVFGSSILVVPFAFSQCGWALGTLCMIFCGLFTELGAHFLLESARLV-TSMYPSVNSDALSFADIASHATPRLAFLPTVLVIVTCLGSAVSALKTATAKSTATF 144
BLAST of NO08G00300 vs. NCBI_GenBank
Match: AOW03943.1 (hypothetical protein YALI1_D14670g [Yarrowia lipolytica] >SEI36542.1 YALIA101S12e02212g1_1 [Yarrowia lipolytica]) HSP 1 Score: 107.5 bits (267), Expect = 1.300e-19 Identity = 84/308 (27.27%), Postives = 153/308 (49.68%), Query Frame = 0 Query: 57 SGTLGSSILILISSVFGSSILAVPFAFSKCGWFLGTICLIFCGLLTQLGAHFLLESAYLVSSSLAPSSSPRCLAFSDIAARATPRLAFLPNVLVVVNCLGSAVASLVVAGDLMPRTFRDLAILSDHSSLIENANGLLDDYLLHRSLWVSLILLLVLPLCFLRSITPLRYAGLVTCIAVSYFIIVVVTLFIFPSAGACLLYSSPPSSSISCAKNVIPFPPSLPVLLHHLLLACPVFFFSFSINFQVLPIHNALRNPSLHTTHLAIATALICSGLTYLLVSLSAYSTFGELVQSNLFKNYGNTWPLDTAR 365 +GT+ SS++ L++++ G+ ILA+PFA + FLG +I G L+ G A+ AP+ R +F +A++ P L+ + ++ + V C G V+ L++ GDLMP+ + L D++ +++ R W+ + +V+PL +LR I L+Y LV I+V Y I++VV ++F S IS + P P + ++L P+ F+F+ + + I N L++ + + +AT++ S Y LV ++ Y +FG +V N+ Y ++ + AR Sbjct: 34 TGTIMSSVINLVNTIVGAGILAMPFALRQNSLFLGVFLIIMSGSLSGFGLFLQGRCAF-----YAPA---RQASFFALASQTYPSLSVIFDIAIAVKCFGVGVSYLIIVGDLMPQVVQSLFNPGDNT-----------QFIVSREFWILASVAIVVPLSYLRKIDSLKYTSLVALISVGYLIVLVVAYYLF--------------SDISSTR--APISLFKPAKISNVLSCFPIIVFAFTCHQNMFSIVNELQHRTAANINRVVATSISFSAFCYCLVGVTGYLSFGNIVSGNIVSMYPSSVATEIAR 306
BLAST of NO08G00300 vs. NCBI_GenBank
Match: PKI84154.1 (hypothetical protein MVES_002124 [Malassezia sp. JP-2017]) HSP 1 Score: 107.5 bits (267), Expect = 1.300e-19 Identity = 81/293 (27.65%), Postives = 143/293 (48.81%), Query Frame = 0 Query: 62 SSILILISSVFGSSILAVPFAFSKCGWFLGTICLIFCGLLTQLGAHFLLESAYLVSSSLAPSSSPRCLAFSDIAARATPRLAFLPNVLVVVNCLGSAVASLVVAGDLMPRTFRDLAILSDHSSLIENANGLLDDYLLHRSLWVSLILLLVLPLCFLRSITPLRYAGLVTCIAVSYFIIVVVTLFIFPSAGACLLYSSPPSSSISCAKNVIPFPPSLPVLLHHLLLACPVFFFSFSINFQVLPIHNALRNPSLHTTHLAIATALICSGLTYLLVSLSAYSTFGELVQSNLFKNY 355 SSI L ++V G+ +LA+P AF+ GW LGT+ LI CG + G + +L + R +F ++A P+LA+ + + + C G ++ L+++G LM R LA ++ + + +++ ++LWV L L ++ P+CF R + LR G + +AV+Y +I V+ F F +A L PP I A + +L A P+ F+++ +LP++N L ++ +L +L S YL+++L+ Y +FG N+ Y Sbjct: 15 SSISNLSNTVIGAGMLALPHAFATMGWALGTMLLILCGAIATFGLYLVLMCEVKIGR--------RVDSFYEMANLVLPQLAWYFDAAIFIKCFGVGISYLMISGQLMTSVIRSLAQIAGGDA------DAMPAWVMSKTLWVMLFLFILSPVCFYRRLDSLRGVGYLNMVAVAYLLITVL-YFTFSAAARATL---PPRGEIKAA-----------IFSADILRAFPIIVFAYTCAQNILPVYNELEQRTIFRCNLVSILSLSSSAFVYLVIALAGYGSFGSSTGDNIIAMY 278
BLAST of NO08G00300 vs. NCBI_GenBank
Match: XP_012188045.1 (amino acid transporter [Pseudozyma hubeiensis SY62] >GAC94458.1 amino acid transporter [Pseudozyma hubeiensis SY62]) HSP 1 Score: 105.5 bits (262), Expect = 4.800e-19 Identity = 89/309 (28.80%), Postives = 151/309 (48.87%), Query Frame = 0 Query: 51 TVDAPPSG--TLGSSILILISSVFGSSILAVPFAFSKCGWFLGTICLIFCGLLTQLGAHFLLESAYLVSSSLAPSSSPRCLAFSDIAARATPRLAFLPNVLVVVNCLGSAVASLVVAGDLMPRTFRDLAILSDHSSLIENANGLLDDYLLHRSLWVSLILLLVLPLCFLRSITPLRYAGLVTCIAVSYFIIVVVTLFIFPSAGACLLYSSPPSSSISCAKNVIPFPPSLPVLLHHLLLACPVFFFSFSINFQVLPIHNALRNPSLHTTHLAIATALICSGLTYLLVSLSAYSTFGELVQSNLFKNYGNT 358 T P G TL SS+ L +++ G+ +LA P AF G LG + ++FCG LG + L A V R +F IA++A P A+ ++ + + C G +++ L++ G LMP+ I+S + + + + + L RS W+ +++L++PLCFLR + LR+ ++ +AV Y +I+V+ A A L PP + L + H + PVF F+F+ +LP++N L S + AI +++ G+ YL+V + Y +FG V N+ Y +T Sbjct: 38 TASIAPEGKATLVSSVSNLTNTIIGTGMLATPGAFKYTGLLLGPLLILFCGFTAALGLYLLTRCAARVGG--------RKNSFFTIASQALPAGAWYFDLAIALKCYGVSISYLIICGQLMPQ-----VIISFFRAFHRDVH-QIPELFLDRSFWILALIILLIPLCFLRRLDSLRHTSYLSLLAVFYLVIIVLHYSFSSDAKASL----PPKGDV-----------ELVSVSWHTISIFPVFVFAFTCAQNMLPVYNELFYNSEARVNTAIVSSIGTGGVVYLIVGVLGYLSFGGNVGDNIIAMYPST 317
BLAST of NO08G00300 vs. NCBI_GenBank
Match: XP_016289813.1 (hypothetical protein PSEUBRA_SCAF8g02200 [Kalmanozyma brasiliensis GHG001] >EST04824.1 hypothetical protein PSEUBRA_SCAF8g02200 [Kalmanozyma brasiliensis GHG001]) HSP 1 Score: 104.8 bits (260), Expect = 8.200e-19 Identity = 89/309 (28.80%), Postives = 150/309 (48.54%), Query Frame = 0 Query: 51 TVDAPPSG--TLGSSILILISSVFGSSILAVPFAFSKCGWFLGTICLIFCGLLTQLGAHFLLESAYLVSSSLAPSSSPRCLAFSDIAARATPRLAFLPNVLVVVNCLGSAVASLVVAGDLMPRTFRDLAILSDHSSLIENANGLLDDYLLHRSLWVSLILLLVLPLCFLRSITPLRYAGLVTCIAVSYFIIVVVTLFIFPSAGACLLYSSPPSSSISCAKNVIPFPPSLPVLLHHLLLACPVFFFSFSINFQVLPIHNALRNPSLHTTHLAIATALICSGLTYLLVSLSAYSTFGELVQSNLFKNYGNT 358 T PP G +L SSI L +++ G+ +LA P AF G LG ++FCGL LG + L A V R +F IA++A P A+ ++ + + C G +++ L++ G LMP+ I+S + + + + L RS W+ +++L++PLCFLR + LR+ ++ +AV Y +I+V+ A A L PP + + H + PVF F+F+ +LP++N L + + AI +++ G+ YL+V + Y +FG V N+ Y +T Sbjct: 37 TASIPPEGRASLISSISNLTNTIIGTGMLATPGAFKYTGLLLGAFLILFCGLSAALGLYLLTRCAARVGG--------RKNSFFTIASQALPAGAWYFDLAIALKCYGVSISYLIICGQLMPQ-----VIISFFRAFHRDIH-QIPTLFLDRSFWILALIILLIPLCFLRRLDSLRHTSYLSLLAVFYLVIIVLHYSFSSDARASL----PPKGDVEMIN-----------VSWHTISIFPVFVFAFTCAQNMLPVYNELFHNVEGRVNTAIGSSIGTGGVVYLIVGVLGYLSFGGNVGDNIIAMYPST 316
BLAST of NO08G00300 vs. NCBI_GenBank
Match: XP_002174415.1 (vacuolar amino acid efflux transporter Avt8 [Schizosaccharomyces japonicus yFS275] >EEB08122.1 vacuolar amino acid efflux transporter Avt8 [Schizosaccharomyces japonicus yFS275]) HSP 1 Score: 104.8 bits (260), Expect = 8.200e-19 Identity = 85/307 (27.69%), Postives = 150/307 (48.86%), Query Frame = 0 Query: 57 SGTLGSSILILISSVFGSSILAVPFAFSKCGWFLGTICLIFCGLLTQLGAHFLLESAYLVSSSLAPSSSPRCLAFSDIAARATPRLAFLPNVLVVVNCLGSAVASLVVAGDLMPRTFRDLAILSDHSSLIENANGLLDDYLLHRSLWVSLILLLVLPLCFLRSITPLRYAGLVTCIAVSYFIIVVV-TLFIFPSAGACLLYSSPPSSSISCAKNVIPFPPSLPVLLHHLLLACPVFFFSFSINFQVLPIHNALRNPSLHTTHLAIATALICSGLTYLLVSLSAYSTFGELVQSNLFKNY-GNT-WPL 361 + +L SS++ + +++ G+ +LA+P A S+ F G + LIF G + LG +F+ S A P +F+ +A R P LA ++ + V C G +V+ L++ GDLMP+ I N+ G L R W+++ +++++P FLR + LR+ L++ IA+SY +++V+ F + + Y +P S+S L PVF F F+ + I N +N + L + A+ S + YL+++++ Y +FG+LV N+ Y GN+ W L Sbjct: 21 TASLMSSVINMANTIIGAGVLALPHALSQTSLFWGVVMLIFSGFTSYLGLYFI--------SRCAARLPPGKASFAAVAKRTFPSLAVFFDIAIAVKCFGVSVSYLIIVGDLMPQ--------------IANSMGFTSAALSSRHFWITVSIIVLIPFSFLRKLDSLRHTSLISLIALSYLVVMVMFHYFAADTVRGEVSYFTPASAS-------------------GFLSVIPVFVFGFTCHMNAFSIVNESKNKAHGHLALGMFLAVFVSLIVYLIIAVAGYLSFGDLVSGNVIAMYDGNSVWTL 286
BLAST of NO08G00300 vs. NCBI_GenBank
Match: XP_011388563.1 (hypothetical protein UMAG_02221 [Ustilago maydis 521] >KIS69691.1 hypothetical protein UMAG_02221 [Ustilago maydis 521]) HSP 1 Score: 104.4 bits (259), Expect = 1.100e-18 Identity = 90/309 (29.13%), Postives = 148/309 (47.90%), Query Frame = 0 Query: 51 TVDAPPSG--TLGSSILILISSVFGSSILAVPFAFSKCGWFLGTICLIFCGLLTQLGAHFLLESAYLVSSSLAPSSSPRCLAFSDIAARATPRLAFLPNVLVVVNCLGSAVASLVVAGDLMPRTFRDLAILSDHSSLIENANGLLDDYLLHRSLWVSLILLLVLPLCFLRSITPLRYAGLVTCIAVSYFIIVVVTLFIFPSAGACLLYSSPPSSSISCAKNVIPFPPSLPVLLHHLLLACPVFFFSFSINFQVLPIHNALRNPSLHTTHLAIATALICSGLTYLLVSLSAYSTFGELVQSNLFKNYGNT 358 T P G TL SSI L +++ G+ +LA P AF G LG + ++FCG LG + L A V R +F IA++A P A+ ++ + + C G +++ L++ G LMP+ I+S + + + + L RS W+ +++L++PLCFLR + LR+ ++ +AV Y +I+V+ A A L PP + L L H + PVF F+F+ +LP++N L N + AI +++ YL+V + Y +FG V N+ Y +T Sbjct: 37 TASIAPEGKATLVSSISNLTNTIIGTGMLATPGAFKYTGLVLGPLLIVFCGFTAALGLYLLTRCAARVGG--------RKNSFFTIASQALPAGAWYFDLAIALKCYGVSISYLIICGQLMPQ-----VIMSFFRAFNRDVH-QIPQLFLDRSFWILALIILLIPLCFLRRLDSLRHTSYLSLLAVLYLVIIVLHYSFSSDAKATL----PPKGEV-----------ELVNLSWHTISIFPVFVFAFTCAQNMLPVYNELFNNHERRVNSAIGSSIGTGATVYLIVGVLGYLSFGGNVGDNIIAMYPST 316
BLAST of NO08G00300 vs. NCBI_GenBank
Match: XP_502717.1 (YALI0D11836p [Yarrowia lipolytica CLIB122] >CAG80905.1 YALI0D11836p [Yarrowia lipolytica CLIB122]) HSP 1 Score: 104.0 bits (258), Expect = 1.400e-18 Identity = 82/303 (27.06%), Postives = 149/303 (49.17%), Query Frame = 0 Query: 62 SSILILISSVFGSSILAVPFAFSKCGWFLGTICLIFCGLLTQLGAHFLLESAYLVSSSLAPSSSPRCLAFSDIAARATPRLAFLPNVLVVVNCLGSAVASLVVAGDLMPRTFRDLAILSDHSSLIENANGLLDDYLLHRSLWVSLILLLVLPLCFLRSITPLRYAGLVTCIAVSYFIIVVVTLFIFPSAGACLLYSSPPSSSISCAKNVIPFPPSLPVLLHHLLLACPVFFFSFSINFQVLPIHNALRNPSLHTTHLAIATALICSGLTYLLVSLSAYSTFGELVQSNLFKNYGNTWPLDTAR 365 SS++ L++++ G+ ILA+PFA + FLG +I G L+ G A+ AP+ R +F +A++ P L+ + ++ + V C G V+ L++ GDLMP+ + L D++ +++ R W+ + +V+PL +LR I L+Y LV I+V Y I++VV ++F S IS + P P + ++L P+ F+F+ + + I N L++ + + +AT++ S Y LV ++ Y +FG +V N+ Y ++ + AR Sbjct: 2 SSVINLVNTIVGAGILAMPFALRQNSLFLGVFLIIMSGSLSGFGLFLQGRCAF-----YAPA---RQASFFALASQTYPSLSVIFDIAIAVKCFGVGVSYLIIVGDLMPQVVQSLFNPGDNT-----------QFIVSREFWILASVAIVVPLSYLRKIDSLKYTSLVALISVGYLIVLVVAYYLF--------------SDISSTR--APISLFKPAKISNVLSCFPIIVFAFTCHQNMFSIVNELQHRTAANINRVVATSISFSAFCYCLVGVTGYLSFGNIVSGNIVSMYPSSVATEIAR 269
BLAST of NO08G00300 vs. NCBI_GenBank
Match: CBQ72783.1 (conserved hypothetical protein (N-terminal fragment), partial [Sporisorium reilianum SRZ2]) HSP 1 Score: 102.8 bits (255), Expect = 3.100e-18 Identity = 87/301 (28.90%), Postives = 148/301 (49.17%), Query Frame = 0 Query: 57 SGTLGSSILILISSVFGSSILAVPFAFSKCGWFLGTICLIFCGLLTQLGAHFLLESAYLVSSSLAPSSSPRCLAFSDIAARATPRLAFLPNVLVVVNCLGSAVASLVVAGDLMPRTFRDLAILSDHSSLIENANGLLDDYLLHRSLWVSLILLLVLPLCFLRSITPLRYAGLVTCIAVSYFIIVVVTLFIFPSAGACLLYSSPPSSSISCAKNVIPFPPSLPVLLHHLLLACPVFFFSFSINFQVLPIHNALRNPSLHTTHLAIATALICSGLTYLLVSLSAYSTFGELVQSNLFKNYGNT 358 + +L SSI L +++ G+ +LA P AF G LG ++FCG LG + L A V R +F IA++A P A+ ++ + + C G +++ L++ G LMP+ I+S + + + + L RS W+ +++L++PLCFLR + LR+ ++ +AV Y +I+V+ A A L PP + L + H + PVF F+F+ +LP++N L + S + AIA+++ G YL+V + Y +FG V N+ Y +T Sbjct: 45 NASLVSSISNLTNTIIGTGMLATPGAFKYTGLLLGPALILFCGFTAALGLYLLTRCAARVGG--------RKNSFFTIASQALPAGAWYFDLAIALKCYGVSISYLIICGQLMPQ-----VIISFFRAFHRDIH-QIPTIFLDRSFWILALIILLIPLCFLRRLDSLRHTSYLSLLAVFYLVIIVLHYSFSSDAKASL----PPKGDV-----------ELVNVSWHTISIFPVFVFAFTCAQNMLPVYNELFHNSETRVNTAIASSIGTGGTVYLIVGVLGYLSFGGNVGDNIIAMYPST 316 The following BLAST results are available for this feature:
BLAST of NO08G00300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G00300 ID=NO08G00300|Name=NO08G00300|organism=Nannochloropsis oceanica|type=gene|length=2464bpback to top protein sequence of NO08G00300.1 >NO08G00300.1-protein ID=NO08G00300.1-protein|Name=NO08G00300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=503bpback to top Synonyms
Publications
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