NO07G04570, NO07G04570 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G04570 vs. NCBI_GenBank
Match: XP_008915271.1 (hypothetical protein PPTG_18845 [Phytophthora parasitica INRA-310] >ETK71263.1 hypothetical protein L915_21473 [Phytophthora parasitica] >ETL24722.1 hypothetical protein L916_21337 [Phytophthora parasitica] >ETL77935.1 hypothetical protein L917_21193 [Phytophthora parasitica] >ETM31198.1 hypothetical protein L914_21204 [Phytophthora parasitica] >ETM99383.1 hypothetical protein PPTG_18845 [Phytophthora parasitica INRA-310]) HSP 1 Score: 240.7 bits (613), Expect = 6.800e-60 Identity = 133/286 (46.50%), Postives = 182/286 (63.64%), Query Frame = 0 Query: 62 EFLSLCLNHAEGLRDEQLRKHFAER----YLQLVPIINSCLAENRIRCMKTERNELVYQAMDPNLAEKMKNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLIKSTSSISSKTRKLYLLFDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYMFIKQQRKPPSLAAISDYVRTSGVSKVELAAEEVQLIINSLAYDMKIEPVRSGVL--GALHTPDGGPCYKVSRHVTPLNHFTDFPCGRCPVQAQCEEGGEISPAACRYFNRWLELKD 342 +FL L N+ E + D ++R +F Y QL +IN+ L E +I+ K + + L Y +D AE+++ L EQ LV Q +E+AGNKGIW +DI+S T++ Q + K L+ LE+R+L+KS SISSK +KLY+LFDL P+ EITGGPWY E EFDH FI+ LS +Y IK +L AI+D V SG+SKV L EE++ II +L YD ++E VRS L GA H YKVS+ +T N+ ++ PCG CPV QC+EG ISP +C Y +WL LK+ Sbjct: 15 KFLGLLKNYREPVTDAEVRDYFQAEGGGGYEQLPDVINALLTEGKIKIFK-KGSVLSYGIVDAEEAERIRGLTLEQRLVLQEIERAGNKGIWTRDIKSHTNIPQQIVTKTLRLLETRRLVKSVKSISSKNKKLYMLFDLVPSTEITGGPWYNEQEFDHVFIDTLSTFVYEVIKASGM-STLNAITDKVHASGISKVALGPEEIRSIIQTLMYDGRVEEVRSVRLTPGASHEVK----YKVSQQITTFNYLSETPCGVCPVFDQCQEGNVISPRSCLYMTKWLGLKE 294
BLAST of NO07G04570 vs. NCBI_GenBank
Match: XP_002908686.1 (DNA-directed RNA polymerase III subunit RPC6, putative [Phytophthora infestans T30-4] >EEY57500.1 DNA-directed RNA polymerase III subunit RPC6, putative [Phytophthora infestans T30-4]) HSP 1 Score: 240.4 bits (612), Expect = 8.900e-60 Identity = 133/286 (46.50%), Postives = 183/286 (63.99%), Query Frame = 0 Query: 62 EFLSLCLNHAEGLRDEQLRKHF----AERYLQLVPIINSCLAENRIRCMKTERNELVYQAMDPNLAEKMKNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLIKSTSSISSKTRKLYLLFDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYMFIKQQRKPPSLAAISDYVRTSGVSKVELAAEEVQLIINSLAYDMKIEPVRSGVL--GALHTPDGGPCYKVSRHVTPLNHFTDFPCGRCPVQAQCEEGGEISPAACRYFNRWLELKD 342 +FL L N+ E + D ++R++F Y QL +IN+ L E +I+ K + + L Y +D AE+++ L EQ LV Q +E+AGNKGIW +DI+S T++ Q + K L+ LE+R+L+KS SISSK +KLY+LFDL P+ EITGGPWY E EFDH FI+ LS +Y IK +L AI+D V SG+SKV L EE++ II +L YD ++E VRS L GA H YKVS+ +T N+ ++ PCG CPV QC+EG ISP +C Y +WL LK+ Sbjct: 15 KFLGLLKNYREPVTDAEVREYFQAGGGGGYDQLPDVINALLTEGKIKIFK-KGSVLSYGIVDAEEAERIRGLTLEQRLVLQEIERAGNKGIWTRDIKSHTNIPQQIVTKTLRLLETRRLVKSVKSISSKNKKLYMLFDLVPSTEITGGPWYNEQEFDHVFIDTLSTFVYEVIKASGM-STLNAITDKVHASGISKVALGPEEIRSIIQTLMYDGRVEEVRSVRLTPGASHEVK----YKVSQQITTFNYLSETPCGVCPVFDQCQEGNVISPRSCLYMTKWLGLKE 294
BLAST of NO07G04570 vs. NCBI_GenBank
Match: POM57839.1 (DNA-directed RNA polymerase III subunit RPC6 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 240.4 bits (612), Expect = 8.900e-60 Identity = 133/286 (46.50%), Postives = 181/286 (63.29%), Query Frame = 0 Query: 62 EFLSLCLNHAEGLRDEQLRKHFAER----YLQLVPIINSCLAENRIRCMKTERNELVYQAMDPNLAEKMKNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLIKSTSSISSKTRKLYLLFDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYMFIKQQRKPPSLAAISDYVRTSGVSKVELAAEEVQLIINSLAYDMKIEPVRSGVL--GALHTPDGGPCYKVSRHVTPLNHFTDFPCGRCPVQAQCEEGGEISPAACRYFNRWLELKD 342 +FL L N+ E + D ++R +F Y QL +IN+ L E +I+ K + + L Y +D AE+++ L EQ LV Q +E+AGNKGIW +DI+S T++ Q + K L+ LE+R L+KS SISSK +KLY+LFDL P+ EITGGPWY E EFDH FI+ LS +Y IK +L AI+D V SG+SKV L EE++ II +L YD ++E VRS L GA H YKVS+ +T N+ ++ PCG CPV QC+EG ISP +C Y +WL LK+ Sbjct: 13 KFLGLLRNYREPVTDAEVRDYFQAEGGGGYEQLPDVINALLTEGKIKIFK-KGSVLSYGIVDAEEAERIRGLTLEQRLVLQEIERAGNKGIWTRDIKSHTNIPQQIVTKTLRLLETRHLVKSVKSISSKNKKLYMLFDLVPSTEITGGPWYNEQEFDHVFIDTLSTFVYEVIKASGM-STLNAITDKVHASGISKVALGPEEIRSIIQTLMYDGRVEEVRSVRLTPGASHEVK----YKVSQQITTFNYLSETPCGVCPVFDQCQEGNVISPRSCLYMTKWLGLKE 292
BLAST of NO07G04570 vs. NCBI_GenBank
Match: OWZ21373.1 (DNA-directed RNA polymerase III subunit RPC6 [Phytophthora megakarya]) HSP 1 Score: 237.7 bits (605), Expect = 5.800e-59 Identity = 131/286 (45.80%), Postives = 182/286 (63.64%), Query Frame = 0 Query: 62 EFLSLCLNHAEGLRDEQLRKHFAER----YLQLVPIINSCLAENRIRCMKTERNELVYQAMDPNLAEKMKNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLIKSTSSISSKTRKLYLLFDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYMFIKQQRKPPSLAAISDYVRTSGVSKVELAAEEVQLIINSLAYDMKIEPVRSGVL--GALHTPDGGPCYKVSRHVTPLNHFTDFPCGRCPVQAQCEEGGEISPAACRYFNRWLELKD 342 +FL L N+ E + D ++R++F Y L +IN+ L E +I+ K + + L Y +D AE+++ L EQ LV Q +E+AGNKGIW +DI++ T++ Q + K L+ LE+R+L+KS SISSK +KLY+LFDL P+ EITGGPWY E EFDH FI+ LS +Y IK +L AI+D V SG+SKV L EE++ II +L YD ++E VRS L GA H YKVS+ +T N+ ++ PCG CPV QC+EG ISP +C Y +WL LK+ Sbjct: 3 KFLGLLRNYREPVTDAEVREYFQAEGGGGYELLPDVINALLTEGKIKIFK-KGSVLSYGIVDAEEAERIRGLTLEQRLVLQEIERAGNKGIWTRDIKAHTNIPQQIVTKTLRLLETRRLVKSVKSISSKNKKLYMLFDLVPSTEITGGPWYNEQEFDHVFIDTLSTFVYEVIKASGM-STLNAITDKVHASGISKVALGPEEIRSIIQTLMYDGRVEEVRSVRLTAGASHEVK----YKVSQQITTFNYLSETPCGVCPVFDQCQEGNVISPRSCLYMTKWLGLKE 282
BLAST of NO07G04570 vs. NCBI_GenBank
Match: KUF93678.1 (Lysine--tRNA ligase [Phytophthora nicotianae]) HSP 1 Score: 236.1 bits (601), Expect = 1.700e-58 Identity = 130/284 (45.77%), Postives = 179/284 (63.03%), Query Frame = 0 Query: 62 EFLSLCLNHAEGLRDEQLRKHFAER----YLQLVPIINSCLAENRIRCMKTERNELVYQAMDPNLAEKMKNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLIKSTSSISSKTRKLYLLFDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYMFIKQQRKPPSLAAISDYVRTSGVSKVELAAEEVQLIINSLAYDMKIEPVRSGVLGALHTPDGGPCYKVSRHVTPLNHFTDFPCGRCPVQAQCEEGGEISPAACRYFNRWLELKD 342 +FL N+ E + D ++R +F Y QL +IN+ L E +I+ K + + L Y +D AE+++ L EQ LV Q +E+AGNKGIW +DI+S T++ Q + K L+ LE+R+L+KS SISSK +KLY+LFDL P+ EITGGPWY E EFDH FI+ LS +Y IK +L AI+D V SG+SKV L EE++ II +L YD ++E VRS A H YKVS+ +T N+ ++ PCG CPV QC+EG ISP +C Y +WL LK+ Sbjct: 15 KFLGQLKNYREPVTDAEVRDYFQAEGGGGYEQLPDVINALLTEGKIKIFK-KGSVLSYGIVDAEEAERIRGLTLEQRLVLQEIERAGNKGIWTRDIKSHTNIPQQIVTKTLRLLETRRLVKSVKSISSKNKKLYMLFDLVPSTEITGGPWYNEQEFDHVFIDTLSTFVYEVIKASGM-STLNAITDKVHASGISKVALGPEEIRSIIQTLMYDGRVEEVRS----ASHEVK----YKVSQQITTFNYLSETPCGVCPVFDQCQEGNVISPRSCLYMTKWLGLKE 288
BLAST of NO07G04570 vs. NCBI_GenBank
Match: GAX92548.1 (DNA-directed RNA polymerase III subunit RPC6, putative [Pythium insidiosum]) HSP 1 Score: 235.3 bits (599), Expect = 2.900e-58 Identity = 128/283 (45.23%), Postives = 182/283 (64.31%), Query Frame = 0 Query: 62 EFLSLCLNHAEGLRDEQLRKHFA-ERYLQLVPIINSCLAENRIRCMKTERNELVYQAMDPNLAEKMKNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLIKSTSSISSKTRKLYLLFDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYMFIKQQRKPPSLAAISDYVRTSGVSKVELAAEEVQLIINSLAYDMKIEPVRSGVL--GALHTPDGGPCYKVSRHVTPLNHFTDFPCGRCPVQAQCEEGGEISPAACRYFNRWLELKD 342 +FLSL ++ + L D ++R+ FA Y +L +IN+ + E RI+ + + L Y + AE++K L EQ LV Q +E+AGNKG+W +DI++ T++ Q + K L+ LESR+L+KS SISSK +KLY+LFDL P+ EITGGPWY E EFDH FI+ LS +Y IK +L AI+D V SG+SKV L +E++ II +L YD ++E VR+ L GA H YK+S+ ++ N ++ PCG CPV QC+EG ISP +C Y +WL+LKD Sbjct: 17 KFLSLLRSYPDPLTDAEVREAFAGGEYERLPTVINALMGEGRIKXFQ-RGSVLSYGVVGAEEAERIKGLTIEQRLVLQEIERAGNKGVWTRDIKTHTNIPQQIVTKTLRVLESRRLVKSVKSISSKNKKLYMLFDLVPSTEITGGPWYNEQEFDHVFIDTLSTFVYEVIKASGM-STLKAITDKVHASGISKVALGPDEIRSIIQTLMYDGRVEEVRAVRLTPGANHETK----YKISQEISTFNALSETPCGVCPVFDQCQEGNVISPRSCLYLTKWLDLKD 293
BLAST of NO07G04570 vs. NCBI_GenBank
Match: OQR81991.1 (DNA-directed RNA polymerase III subunit RPC6 [Thraustotheca clavata]) HSP 1 Score: 227.3 bits (578), Expect = 7.800e-56 Identity = 116/286 (40.56%), Postives = 176/286 (61.54%), Query Frame = 0 Query: 63 FLSLCLNHAEGLRDEQLRKHFAERYLQLVPIINSCLAENRIRCMKTERNELVYQAMDPNLAEKMKNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLIKSTSSISSKTRKLYLLFDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYMFIKQQRKPPSLAAISDYVRTSGVSKVELAAEEVQLIINSLAYDMKIEPVRSGVLGALHTPDGGPC-------YKVSRHVTPLNHFTDFPCGRCPVQAQCEEGGEISPAACRYFNRWLELKD 342 FL L + E + D ++K F E+Y +L IN + E+R++ + + ++YQ + AE+M+ L AE V +EKAGNKG+W +DI+ QT+L + ++KI++ LE+R L+K+ SIS K +KLY+L+DL P+++ITGGPWY E EFDH+FI+ LS + FI+ + +L I+D V SG++KV L EE+ I+N+L YD +IE VR+ L G C YK+ R V+ + ++ PCG CPV QC +G ISPA C Y +W+++ D Sbjct: 7 FLDLLGSSLEPVADSVIKKSFGEQYAKLPACINRLVTESRVKIL-MQGTTILYQLVPKEEAERMQGLSAEHRAVLHEIEKAGNKGVWTRDIKMQTNLAEVTIRKIIRVLETRHLVKAVKSISQKNKKLYMLYDLVPSRDITGGPWYNEQEFDHDFIDSLSNFVCQFIR-AKGVVTLQQITDKVHESGIAKVSLGPEEMMSIVNTLIYDERIEEVRTARLA------NGVCLEMREVSYKICRDVSVFDALSESPCGICPVFDQCADGNIISPATCVYLTKWMDIAD 284
BLAST of NO07G04570 vs. NCBI_GenBank
Match: XP_005649155.1 (RNA polymerase Rpc34 [Coccomyxa subellipsoidea C-169] >EIE24611.1 RNA polymerase Rpc34 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 227.3 bits (578), Expect = 7.800e-56 Identity = 119/280 (42.50%), Postives = 177/280 (63.21%), Query Frame = 0 Query: 61 DEFLSLCLNHAEGLRDEQLRKHFAERYLQLVPIINSCLAENRIRCMKTER-NELVYQAMDPNLAEKMKNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLIKSTSSISSKTRKLYLLFDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYMFIKQQRKPPSLAAISDYVRTSGVSKVELAAEEVQLIINSLAYDMKIEPVRSGVLGALHTPDGGPCYKVSRHVTP-LNHFTDFPCGRCPVQAQCEEGGEISPAACRYFNRWLE 339 + L+LC H EGL + L ++ Q +N+ LA++R+R ++ R N LVYQ + A K+K L AE LLVYQ + +AG+ GIW KD++++T+LQQP + KILKNL+ R L+KS S+ + +RK+Y+LF+LEPA+E+TGG WYT +FD EFI+ L +A + +I+ + +L ++D+VRT G S+VEL +V I+ +L +D +E S D G Y+ +RHV P + FT PCG CPV +C +GG ISP+ C Y+ WL+ Sbjct: 7 ESILALCRQHPEGLPEAVLEQYIPA--TQRTTAMNNLLAKHRLRILQHPRDNSLVYQEVIQEEAAKLKGLSAEDLLVYQHIAQAGDTGIWTKDLKNRTNLQQPQITKILKNLDQRSLVKSVKSVINPSRKVYILFELEPARELTGGAWYTGQDFDAEFIQVLQQACHKYIENE-GVATLEEVADFVRTKGFSRVELRDADVLCILRTLEFDGLVESSLS---------DDGEVYRPARHVVPKTSPFTSMPCGVCPVINECSDGGVISPSTCTYYQTWLD 274
BLAST of NO07G04570 vs. NCBI_GenBank
Match: XP_008603911.1 (hypothetical protein SDRG_00221 [Saprolegnia diclina VS20] >EQC42488.1 hypothetical protein SDRG_00221 [Saprolegnia diclina VS20]) HSP 1 Score: 226.9 bits (577), Expect = 1.000e-55 Identity = 113/279 (40.50%), Postives = 174/279 (62.37%), Query Frame = 0 Query: 63 FLSLCLNHAEGLRDEQLRKHFAERYLQLVPIINSCLAENRIRCMKTERNELVYQAMDPNLAEKMKNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLIKSTSSISSKTRKLYLLFDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYMFIKQQRKPPSLAAISDYVRTSGVSKVELAAEEVQLIINSLAYDMKIEPVRSGVLGALHTPDGGPCYKVSRHVTPLNHFTDFPCGRCPVQAQCEEGGEISPAACRYFNRWLELKD 342 FL L + E + D+ +RK F ++Y +L IN + E+RI+ + N ++YQ + +E+M+ L E V +EK+GNKG+W +DI+ QT+L + ++KI++ LESR L+K+ SIS K +KLY+L+DL P+++ITGGPWY E EFDH+FI+ LS + FI+ + +L I+D V SG++KV L +E+ I+N+L YD +IE VR+ L D YK+ R V+ + ++ PCG CPV QC +G +SPA C Y +W+ + D Sbjct: 21 FLDLLASSTEPVGDDVVRKSFGDQYAKLPVCINRLMGESRIKILMQGSN-VLYQLVTKEESERMQGLSGEHRAVLHEIEKSGNKGVWTRDIKMQTNLPEMTIRKIIRTLESRHLVKAVKSISQKNKKLYMLYDLVPSRDITGGPWYNEQEFDHDFIDTLSNFVCQFIR-AKGVVTLQQITDKVHESGIAKVSLGPDEMMSIVNTLIYDERIEEVRTARLANGEMRD--VSYKICRDVSVFDGLSEAPCGVCPVFEQCADGNIVSPATCVYLTKWMNVAD 295
BLAST of NO07G04570 vs. NCBI_GenBank
Match: XP_012205817.1 (hypothetical protein SPRG_11426 [Saprolegnia parasitica CBS 223.65] >KDO23504.1 hypothetical protein SPRG_11426 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 226.9 bits (577), Expect = 1.000e-55 Identity = 113/279 (40.50%), Postives = 174/279 (62.37%), Query Frame = 0 Query: 63 FLSLCLNHAEGLRDEQLRKHFAERYLQLVPIINSCLAENRIRCMKTERNELVYQAMDPNLAEKMKNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLIKSTSSISSKTRKLYLLFDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYMFIKQQRKPPSLAAISDYVRTSGVSKVELAAEEVQLIINSLAYDMKIEPVRSGVLGALHTPDGGPCYKVSRHVTPLNHFTDFPCGRCPVQAQCEEGGEISPAACRYFNRWLELKD 342 FL L + E + D+ +RK F ++Y +L IN + E+RI+ + N ++YQ + +E+M+ L E V +EK+GNKG+W +DI+ QT+L + ++KI++ LESR L+K+ SIS K +KLY+L+DL P+++ITGGPWY E EFDH+FI+ LS + FI+ + +L I+D V SG++KV L +E+ I+N+L YD +IE VR+ L D YK+ R V+ + ++ PCG CPV QC +G +SPA C Y +W+ + D Sbjct: 7 FLDLLASSTEPIGDDVVRKSFGDQYAKLPVCINRLMGESRIKILMQGSN-VLYQLVTKEESERMQGLSGEHRAVLHEIEKSGNKGVWTRDIKMQTNLPEMTIRKIIRTLESRHLVKAVKSISQKNKKLYMLYDLVPSRDITGGPWYNEQEFDHDFIDTLSTFVCQFIR-AKGVVTLQQITDKVHESGIAKVSLGPDEMMSIVNTLIYDERIEEVRTARLANGEMRD--VSYKICRDVSVFDGLSEAPCGVCPVFEQCADGNIVSPATCVYLTKWMNVAD 281 The following BLAST results are available for this feature:
BLAST of NO07G04570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G04570 ID=NO07G04570|Name=NO07G04570|organism=Nannochloropsis oceanica|type=gene|length=3738bpback to top protein sequence of NO07G04570.1 >NO07G04570.1-protein ID=NO07G04570.1-protein|Name=NO07G04570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=358bpback to top Synonyms
Publications
|