NO07G04550, NO07G04550 (gene) Nannochloropsis oceanica

Overview
NameNO07G04550
Unique NameNO07G04550
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2085
Alignment locationchr7:1279967..1282051 -

Link to JBrowse

Properties
Property NameValue
DescriptionHistone acetyltransferase complex component
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1279967..1282051 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0140110transcription regulator activity
GO:0016740transferase activity
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeodomain-like
IPR017884SANT_dom
IPR001005SANT/Myb
IPR000433Znf_ZZ
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
GO:0009058biosynthetic process
GO:0006464cellular protein modification process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
BLAST of NO07G04550 vs. NCBI_GenBank
Match: XP_005855429.1 (histone acetyltransferase complex component, partial [Nannochloropsis gaditana CCMP526] >EKU20936.1 histone acetyltransferase complex component, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 331.3 bits (848), Expect = 3.200e-87
Identity = 152/182 (83.52%), Postives = 163/182 (89.56%), Query Frame = 0
Query:   65 GGSLQFRSDMLLVGGKPGLFHCNYCMRDISNTIRIKCAETSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTAYPIFAPDWTATEELLMLSALEAHGMGNWGKVAEVLNSKDKTEKACMEHYLDLYLHSYGSILPKDTVGYGKTHDLLTEEQRKEYVMGPLDMETYPEALHLKGAPPPLP 247
            GG+LQ  SDMLLVGGKPGLFHCNYCMRDISNTIRIKCAE STCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNT YPIF+PDWTATEELL+LSALEAHGMGNWGKVAE+LN K+KTEKACMEHY DLYLHSYGSILPK T+G G+T  L++EE   EY M PLD+  YPEA+HL GAPPP P
Sbjct:   65 GGALQLHSDMLLVGGKPGLFHCNYCMRDISNTIRIKCAEVSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTHYPIFSPDWTATEELLLLSALEAHGMGNWGKVAELLNCKEKTEKACMEHYYDLYLHSYGSILPKQTLGGGETTALVSEE---EYRMRPLDLARYPEAVHLIGAPPPPP 243          
BLAST of NO07G04550 vs. NCBI_GenBank
Match: EWM26926.1 (histone acetyltransferase complex component [Nannochloropsis gaditana])

HSP 1 Score: 315.1 bits (806), Expect = 2.400e-82
Identity = 144/171 (84.21%), Postives = 154/171 (90.06%), Query Frame = 0
Query:   65 GGSLQFRSDMLLVGGKPGLFHCNYCMRDISNTIRIKCAETSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTAYPIFAPDWTATEELLMLSALEAHGMGNWGKVAEVLNSKDKTEKACMEHYLDLYLHSYGSILPKDTVGYGKTHDLLTEEQRKEYVMGPLDMETYPEA 236
            GG+LQ  SDMLLVGGKPGLFHCNYCMRDISNTIRIKCAE STCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNT YPIF+PDWTATEELL+LSALEAHGMGNWGKVAE+LN K+KTEKACMEHY DLYLHSYGSILPK T+G G+T  L++EE   EY M PLD+  YPEA
Sbjct:   65 GGALQLHSDMLLVGGKPGLFHCNYCMRDISNTIRIKCAEVSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTHYPIFSPDWTATEELLLLSALEAHGMGNWGKVAELLNCKEKTEKACMEHYYDLYLHSYGSILPKQTLGGGETTALVSEE---EYRMRPLDLARYPEA 232          
BLAST of NO07G04550 vs. NCBI_GenBank
Match: XP_024533052.1 (transcriptional adapter ADA2 [Selaginella moellendorffii] >XP_024544983.1 transcriptional adapter ADA2 [Selaginella moellendorffii])

HSP 1 Score: 156.0 bits (393), Expect = 1.800e-34
Identity = 71/155 (45.81%), Postives = 100/155 (64.52%), Query Frame = 0
Query:   80 KPGLFHCNYCMRDISNTIRIKCAETSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTAYPIFAPDWTATEELLMLSALEAHGMGNWGKVAEVLNSKDKTEKACMEHYLDLYLHSYGSILPKDTVGYGKTHDLLTEEQRKEYVMGPLDMETYPE 235
            K   +HCNYC +D+S  IRIKCA+   C D+DLC++CF  GVE+  HK++HPYRV+DN ++P+  PDW A EE+L+L  +E +G+GNW +VAE + +K+KT   C EHY+  Y+ S  S LP  +   GKT   L     K Y  G  ++  YP+
Sbjct:   40 KRAAYHCNYCNKDVSGMIRIKCAK---CADFDLCIECFSVGVEISTHKSNHPYRVIDNLSFPLIHPDWNADEEILLLEGIEMYGLGNWAEVAEHVGTKNKTR--CYEHYMTEYMKSVCSPLPDMSNVAGKTKAELL-ALAKAYTEGKKNLLPYPD 188          
BLAST of NO07G04550 vs. NCBI_GenBank
Match: PIA28310.1 (hypothetical protein AQUCO_07200158v1 [Aquilegia coerulea])

HSP 1 Score: 155.6 bits (392), Expect = 2.400e-34
Identity = 74/163 (45.40%), Postives = 102/163 (62.58%), Query Frame = 0
Query:   72 SDMLLVGGKPGLFHCNYCMRDISNTIRIKCAETSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTAYPIFAPDWTATEELLMLSALEAHGMGNWGKVAEVLNSKDKTEKACMEHYLDLYLHSYGSILPKDTVGYGKTHDLL-------TEEQRKEYVMGPL 228
            +D   V GK  L+HCNYC +DIS  IRIKCA    CPD+DLCV+CF  G EL  HK+DHPY+V+DN ++P+ +PDW A EE+L+L A+E +G+G+W ++AE + +K K +  C EHY   YL+S    LP  +   GK    L       TE  ++   +G L
Sbjct:   53 ADSKKVEGKKALYHCNYCTKDISGKIRIKCA---ICPDFDLCVECFSVGAELTPHKSDHPYQVMDNLSFPLISPDWNADEEILLLEAVEMYGLGDWEEIAEHVGTKSKAQ--CNEHYTSFYLNSPHFPLPDMSHVTGKNRKELPSSVEGHTENNKELSTLGEL 210          
BLAST of NO07G04550 vs. NCBI_GenBank
Match: GAU38960.1 (hypothetical protein TSUD_378360 [Trifolium subterraneum])

HSP 1 Score: 155.2 bits (391), Expect = 3.100e-34
Identity = 71/150 (47.33%), Postives = 100/150 (66.67%), Query Frame = 0
Query:   79 GKPGLFHCNYCMRDISNTIRIKCAETSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTAYPIFAPDWTATEELLMLSALEAHGMGNWGKVAEVLNSKDKTEKACMEHYLDLYLHSYGSILP--KDTVGYGKTHDLLTEEQRKEYVMGP 227
            GK  L+HCNYC +DI+  IRIKCA    CPD+DLC++CF  G E+  HK++HPYRV+DN ++P+  PDW A +E+L+L  +E +GMGNW +VAE + +K+K  +AC+EHY ++YL+S    LP     VG  K   L   + + E   GP
Sbjct:   43 GKRALYHCNYCNKDITGKIRIKCA---MCPDFDLCIECFSVGAEVQPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGIEMYGMGNWAEVAEHVGTKNK--EACIEHYQNVYLNSPFFPLPDLSHVVGKNKKELLAMAKGQGEDKKGP 187          
BLAST of NO07G04550 vs. NCBI_GenBank
Match: PNY06312.1 (transcriptional adapter ADA2b-like protein [Trifolium pratense])

HSP 1 Score: 155.2 bits (391), Expect = 3.100e-34
Identity = 71/150 (47.33%), Postives = 100/150 (66.67%), Query Frame = 0
Query:   79 GKPGLFHCNYCMRDISNTIRIKCAETSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTAYPIFAPDWTATEELLMLSALEAHGMGNWGKVAEVLNSKDKTEKACMEHYLDLYLHSYGSILP--KDTVGYGKTHDLLTEEQRKEYVMGP 227
            GK  L+HCNYC +DI+  IRIKCA    CPD+DLC++CF  G E+  HK++HPYRV+DN ++P+  PDW A +E+L+L  +E +GMGNW +VAE + +K+K  +AC+EHY ++YL+S    LP     VG  K   L   + + E   GP
Sbjct:   43 GKRALYHCNYCNKDITGKIRIKCA---MCPDFDLCIECFSVGAEVQPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGIEMYGMGNWAEVAEHVGTKNK--EACIEHYQNVYLNSPFFPLPDLSHVVGKNKKELLAMAKGQGEDKKGP 187          
BLAST of NO07G04550 vs. NCBI_GenBank
Match: EEF52494.1 (transcriptional adaptor, putative [Ricinus communis])

HSP 1 Score: 154.8 bits (390), Expect = 4.100e-34
Identity = 70/149 (46.98%), Postives = 97/149 (65.10%), Query Frame = 0
Query:   66 GSLQFRSDMLLVGGKPGLFHCNYCMRDISNTIRIKCAETSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTAYPIFAPDWTATEELLMLSALEAHGMGNWGKVAEVLNSKDKTEKACMEHYLDLYLHSYGSILPKDTVGYGKTHDLL 215
            GS Q  S      GK  L+HCNYC +DIS  IRIKCA    CPD+DLCV+CF  G E+  HK+ HPYRV+DN ++P+  PDW A EE+L+L  +E +G GNW +VAE + +K K++  C++HY  +Y++S    LP  +   GK+ + L
Sbjct:   29 GSAQTTSSPETSEGKAALYHCNYCKKDISGFIRIKCA---VCPDFDLCVECFSVGAEVTPHKSSHPYRVMDNLSFPLICPDWNADEEILLLEGIEMYGFGNWAEVAEHVGTKSKSK--CIDHYNAIYMNSPCFPLPDMSHVMGKSREEL 172          
BLAST of NO07G04550 vs. NCBI_GenBank
Match: XP_004486336.1 (PREDICTED: transcriptional adapter ADA2b isoform X1 [Cicer arietinum])

HSP 1 Score: 154.5 bits (389), Expect = 5.300e-34
Identity = 71/158 (44.94%), Postives = 102/158 (64.56%), Query Frame = 0
Query:   79 GKPGLFHCNYCMRDISNTIRIKCAETSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTAYPIFAPDWTATEELLMLSALEAHGMGNWGKVAEVLNSKDKTEKACMEHYLDLYLHSYGSILPKDTVGYGKTHDLLTE------EQRKEYVMGPLDME 231
            GK  L+HCNYC +DI+  IRIKCA    CPD+DLC++CF  G E+  HK++HPYRV+DN ++P+  PDW A +E+L+L  +E +GMGNW +VAE + +K+K  +AC+EHY ++YL S    LP  +   GK    L        + +K   MG L ++
Sbjct:   43 GKRALYHCNYCNKDITGKIRIKCA---VCPDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGIEMYGMGNWAEVAEHVGTKNK--EACIEHYRNVYLSSPYFPLPDMSHVVGKNRKELLAMAKGQGDDKKGVSMGDLSLK 195          
BLAST of NO07G04550 vs. NCBI_GenBank
Match: XP_004486337.1 (PREDICTED: transcriptional adapter ADA2b isoform X2 [Cicer arietinum])

HSP 1 Score: 154.5 bits (389), Expect = 5.300e-34
Identity = 71/158 (44.94%), Postives = 102/158 (64.56%), Query Frame = 0
Query:   79 GKPGLFHCNYCMRDISNTIRIKCAETSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTAYPIFAPDWTATEELLMLSALEAHGMGNWGKVAEVLNSKDKTEKACMEHYLDLYLHSYGSILPKDTVGYGKTHDLLTE------EQRKEYVMGPLDME 231
            GK  L+HCNYC +DI+  IRIKCA    CPD+DLC++CF  G E+  HK++HPYRV+DN ++P+  PDW A +E+L+L  +E +GMGNW +VAE + +K+K  +AC+EHY ++YL S    LP  +   GK    L        + +K   MG L ++
Sbjct:   43 GKRALYHCNYCNKDITGKIRIKCA---VCPDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGIEMYGMGNWAEVAEHVGTKNK--EACIEHYRNVYLSSPYFPLPDMSHVVGKNRKELLAMAKGQGDDKKGVSMGDLSLK 195          
BLAST of NO07G04550 vs. NCBI_GenBank
Match: OMO76954.1 (Zinc finger, ZZ-type [Corchorus capsularis])

HSP 1 Score: 154.1 bits (388), Expect = 7.000e-34
Identity = 72/178 (40.45%), Postives = 110/178 (61.80%), Query Frame = 0
Query:   79 GKPGLFHCNYCMRDISNTIRIKCAETSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTAYPIFAPDWTATEELLMLSALEAHGMGNWGKVAEVLNSKDKTEKACMEHYLDLYLHSYGSILP----------KDTVGYGKTHDLLTEEQRKEYVMGPLDMET----YPEALHLKGAP 243
            GK  LFHCNYC +D++  IRIKCA    CPD+DLC++CF  G E+  HK++HPYRV+DN ++P+  PDW A +E+L+L  +E +G+GNW +VAE + +K K E  C+EHY ++Y+ S    LP          K+ +   K H+   E+++   ++G L M+      P  + ++G P
Sbjct:  133 GKKALFHCNYCNKDLTGKIRIKCA---MCPDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPLICPDWNADDEMLLLEGIEMYGLGNWAEVAEHVGTKSKEE--CIEHYENVYMKSPVFPLPDMSHVVGKNKKELLAMAKGHN---EDKKGSSMLGELTMKEESPFSPSRVKVEGGP 302          
The following BLAST results are available for this feature:
BLAST of NO07G04550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855429.13.200e-8783.52histone acetyltransferase complex component, parti... [more]
EWM26926.12.400e-8284.21histone acetyltransferase complex component [Nanno... [more]
XP_024533052.11.800e-3445.81transcriptional adapter ADA2 [Selaginella moellend... [more]
PIA28310.12.400e-3445.40hypothetical protein AQUCO_07200158v1 [Aquilegia c... [more]
GAU38960.13.100e-3447.33hypothetical protein TSUD_378360 [Trifolium subter... [more]
PNY06312.13.100e-3447.33transcriptional adapter ADA2b-like protein [Trifol... [more]
EEF52494.14.100e-3446.98transcriptional adaptor, putative [Ricinus communi... [more]
XP_004486336.15.300e-3444.94PREDICTED: transcriptional adapter ADA2b isoform X... [more]
XP_004486337.15.300e-3444.94PREDICTED: transcriptional adapter ADA2b isoform X... [more]
OMO76954.17.000e-3440.45Zinc finger, ZZ-type [Corchorus capsularis][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL104nonsL104Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G04550.1NO07G04550.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G04550.1NO07G04550.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G04550 ID=NO07G04550|Name=NO07G04550|organism=Nannochloropsis oceanica|type=gene|length=2085bp
ATGTCTTCTCCTGCCACCAGCAACGCCGCAGTTAAGGACAACCACCCTGC
AATGGTGAAGCAAGCGGCCGATGCGACTGCTGCCGCCAAGGAGAAGGAGG
ACTCTGGCGCGCGCGCCGCAGCACGGGAAGCAGCAGCCGACGCAGCCGCC
GCCGCTGCGACTGCCCCTCCTTCAGCACCAGCGCCAGTCCCAGGCGGGTC
ATTGCAGTTTCGCTCAGACATGCTGCTGGTAGGTGGGAAGCCCGGCTTGT
TCCATTGCAATTATTGCATGCGCGACATCAGCAACACCATACGCATAAAG
Tgtacgtgtagagggagggagggtgcaaggggggaatagacttgaggccg
tgatgggtttggcagcactgcgacgggcaagtggttttcattaatttaag
ttaagggacgttgaattttgtatgtgttatacatccttacattttctggt
cactgaaatcagttttatctcatttcctccctccctccctccctccctct
cccgttccctacctccttaccgccctccctctctcctcccaccctcagGC
GCCGAGACGTCCACCTGCCCCGACTGGGATCTCTGTGTGGACTGCTTTGG
TGCGGGCGTGGAGCTGGGGAAGCACAAGAATGATCATgtacgttaatttt
ggattgagagaaggagatgtaaccctaaataagcggagggaaggagggag
cgagggaaggaaggaaatgaaagaggagctacgtgcattgggagaggcac
acgataaaataatggaggaagcagcaatgcctcgtctctgtcttgtttct
cttagtgtagctgaagtgaccgactcatatctctatgcgttgccctgtcg
tcttgttggagctgaccctcttcccctcctccctccctcctattagCCCT
ACCGCGTCGTAGACAACACGGCCTACCCCATCTTCGCCCCCGACTGGACG
GCCACGGAGGAGCTATTGATGCTGTCGGgtaggccgagaaagggagggag
ggaggaagggacggagggagggcgggcggattgagggcttgcggacaacc
cacacgttgtacgattattctgcaaaaatggcctgaacgactgactatta
cgatagtcgtcaatagtcgtcgatagacgtgtgattaatcgtactcgtgc
atgatttccaccgaggacgactggtagtcgtcgtagtcgtgggacaacca
ctcactccttcttcgccttccactcactccttcttcgccttctccgtttc
ctacccctcactctactccccctcttgactcgctttcctggatcagCCCT
GGAAGCCCACGGGATGGGGAATTGGGGCAAGGTCGCCGAGGTCCTCAATT
CCAAGgcacgtcctccctccctccctccttccctccctccctcccgtcct
tctttcctcaccgacctctccttccctcccttcctcccagGATAAGACGG
AGAAGGCATGTATGGAGCACTACCTTGACCTCTATTTGCACTCGTACGGG
AGCATCTTGCCCAAAGACACAGTGGGTTACGGCAAGACCCACGACCTCCT
GACCGAGGAGCAGCGCAAGgtgagaaaggagggagggagggagggaggga
gggaaggagggagaaaaaggatcgagaagctcgatttggatatcacgcct
cttccttttgcacagtgactctccctccctccctccctcccccgtagGAG
TACGTGATGGGCCCCCTCGACATGGAAACGTACCCGGAGGCCCTGCACCT
GAAGGGCGCCCCCCCCCCCCTCCCCACGGCACGCCCTACTCACGCGAAAA
GGGAGGGAAGGAGAAAAGGGAGGGTGGGAGGGAGGGGGGGGAGGCGAGCA
GCGGCAGGGGCGAGGGGAAGGAGGGTAGTCAGGCTAAGGAGGGAGgtgag
aaggggattatggagggaaagagggcggggaagcgaaatgagtggtgtgg
tgtttctcggcccgtcttgagctttctccctctcctgtggtgtcctcgtc
gtcgttgcgctccccctctctgaccctccctccctccctccctcctcagG
CCCCGCGGCCAACCCCCTTCCCTCCGAGTCGGTAA
back to top

protein sequence of NO07G04550.1

>NO07G04550.1-protein ID=NO07G04550.1-protein|Name=NO07G04550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=298bp
MSSPATSNAAVKDNHPAMVKQAADATAAAKEKEDSGARAAAREAAADAAA
AAATAPPSAPAPVPGGSLQFRSDMLLVGGKPGLFHCNYCMRDISNTIRIK
CAETSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTAYPIFAPDWTAT
EELLMLSALEAHGMGNWGKVAEVLNSKDKTEKACMEHYLDLYLHSYGSIL
PKDTVGYGKTHDLLTEEQRKEYVMGPLDMETYPEALHLKGAPPPLPTARP
THAKREGRRKGRVGGRGGRRAAAGARGRRVVRLRREAPRPTPFPPSR*
back to top
Synonyms
Publications