NO07G04550, NO07G04550 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G04550 vs. NCBI_GenBank
Match: XP_005855429.1 (histone acetyltransferase complex component, partial [Nannochloropsis gaditana CCMP526] >EKU20936.1 histone acetyltransferase complex component, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 331.3 bits (848), Expect = 3.200e-87 Identity = 152/182 (83.52%), Postives = 163/182 (89.56%), Query Frame = 0 Query: 65 GGSLQFRSDMLLVGGKPGLFHCNYCMRDISNTIRIKCAETSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTAYPIFAPDWTATEELLMLSALEAHGMGNWGKVAEVLNSKDKTEKACMEHYLDLYLHSYGSILPKDTVGYGKTHDLLTEEQRKEYVMGPLDMETYPEALHLKGAPPPLP 247 GG+LQ SDMLLVGGKPGLFHCNYCMRDISNTIRIKCAE STCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNT YPIF+PDWTATEELL+LSALEAHGMGNWGKVAE+LN K+KTEKACMEHY DLYLHSYGSILPK T+G G+T L++EE EY M PLD+ YPEA+HL GAPPP P Sbjct: 65 GGALQLHSDMLLVGGKPGLFHCNYCMRDISNTIRIKCAEVSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTHYPIFSPDWTATEELLLLSALEAHGMGNWGKVAELLNCKEKTEKACMEHYYDLYLHSYGSILPKQTLGGGETTALVSEE---EYRMRPLDLARYPEAVHLIGAPPPPP 243
BLAST of NO07G04550 vs. NCBI_GenBank
Match: EWM26926.1 (histone acetyltransferase complex component [Nannochloropsis gaditana]) HSP 1 Score: 315.1 bits (806), Expect = 2.400e-82 Identity = 144/171 (84.21%), Postives = 154/171 (90.06%), Query Frame = 0 Query: 65 GGSLQFRSDMLLVGGKPGLFHCNYCMRDISNTIRIKCAETSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTAYPIFAPDWTATEELLMLSALEAHGMGNWGKVAEVLNSKDKTEKACMEHYLDLYLHSYGSILPKDTVGYGKTHDLLTEEQRKEYVMGPLDMETYPEA 236 GG+LQ SDMLLVGGKPGLFHCNYCMRDISNTIRIKCAE STCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNT YPIF+PDWTATEELL+LSALEAHGMGNWGKVAE+LN K+KTEKACMEHY DLYLHSYGSILPK T+G G+T L++EE EY M PLD+ YPEA Sbjct: 65 GGALQLHSDMLLVGGKPGLFHCNYCMRDISNTIRIKCAEVSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTHYPIFSPDWTATEELLLLSALEAHGMGNWGKVAELLNCKEKTEKACMEHYYDLYLHSYGSILPKQTLGGGETTALVSEE---EYRMRPLDLARYPEA 232
BLAST of NO07G04550 vs. NCBI_GenBank
Match: XP_024533052.1 (transcriptional adapter ADA2 [Selaginella moellendorffii] >XP_024544983.1 transcriptional adapter ADA2 [Selaginella moellendorffii]) HSP 1 Score: 156.0 bits (393), Expect = 1.800e-34 Identity = 71/155 (45.81%), Postives = 100/155 (64.52%), Query Frame = 0 Query: 80 KPGLFHCNYCMRDISNTIRIKCAETSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTAYPIFAPDWTATEELLMLSALEAHGMGNWGKVAEVLNSKDKTEKACMEHYLDLYLHSYGSILPKDTVGYGKTHDLLTEEQRKEYVMGPLDMETYPE 235 K +HCNYC +D+S IRIKCA+ C D+DLC++CF GVE+ HK++HPYRV+DN ++P+ PDW A EE+L+L +E +G+GNW +VAE + +K+KT C EHY+ Y+ S S LP + GKT L K Y G ++ YP+ Sbjct: 40 KRAAYHCNYCNKDVSGMIRIKCAK---CADFDLCIECFSVGVEISTHKSNHPYRVIDNLSFPLIHPDWNADEEILLLEGIEMYGLGNWAEVAEHVGTKNKTR--CYEHYMTEYMKSVCSPLPDMSNVAGKTKAELL-ALAKAYTEGKKNLLPYPD 188
BLAST of NO07G04550 vs. NCBI_GenBank
Match: PIA28310.1 (hypothetical protein AQUCO_07200158v1 [Aquilegia coerulea]) HSP 1 Score: 155.6 bits (392), Expect = 2.400e-34 Identity = 74/163 (45.40%), Postives = 102/163 (62.58%), Query Frame = 0 Query: 72 SDMLLVGGKPGLFHCNYCMRDISNTIRIKCAETSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTAYPIFAPDWTATEELLMLSALEAHGMGNWGKVAEVLNSKDKTEKACMEHYLDLYLHSYGSILPKDTVGYGKTHDLL-------TEEQRKEYVMGPL 228 +D V GK L+HCNYC +DIS IRIKCA CPD+DLCV+CF G EL HK+DHPY+V+DN ++P+ +PDW A EE+L+L A+E +G+G+W ++AE + +K K + C EHY YL+S LP + GK L TE ++ +G L Sbjct: 53 ADSKKVEGKKALYHCNYCTKDISGKIRIKCA---ICPDFDLCVECFSVGAELTPHKSDHPYQVMDNLSFPLISPDWNADEEILLLEAVEMYGLGDWEEIAEHVGTKSKAQ--CNEHYTSFYLNSPHFPLPDMSHVTGKNRKELPSSVEGHTENNKELSTLGEL 210
BLAST of NO07G04550 vs. NCBI_GenBank
Match: GAU38960.1 (hypothetical protein TSUD_378360 [Trifolium subterraneum]) HSP 1 Score: 155.2 bits (391), Expect = 3.100e-34 Identity = 71/150 (47.33%), Postives = 100/150 (66.67%), Query Frame = 0 Query: 79 GKPGLFHCNYCMRDISNTIRIKCAETSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTAYPIFAPDWTATEELLMLSALEAHGMGNWGKVAEVLNSKDKTEKACMEHYLDLYLHSYGSILP--KDTVGYGKTHDLLTEEQRKEYVMGP 227 GK L+HCNYC +DI+ IRIKCA CPD+DLC++CF G E+ HK++HPYRV+DN ++P+ PDW A +E+L+L +E +GMGNW +VAE + +K+K +AC+EHY ++YL+S LP VG K L + + E GP Sbjct: 43 GKRALYHCNYCNKDITGKIRIKCA---MCPDFDLCIECFSVGAEVQPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGIEMYGMGNWAEVAEHVGTKNK--EACIEHYQNVYLNSPFFPLPDLSHVVGKNKKELLAMAKGQGEDKKGP 187
BLAST of NO07G04550 vs. NCBI_GenBank
Match: PNY06312.1 (transcriptional adapter ADA2b-like protein [Trifolium pratense]) HSP 1 Score: 155.2 bits (391), Expect = 3.100e-34 Identity = 71/150 (47.33%), Postives = 100/150 (66.67%), Query Frame = 0 Query: 79 GKPGLFHCNYCMRDISNTIRIKCAETSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTAYPIFAPDWTATEELLMLSALEAHGMGNWGKVAEVLNSKDKTEKACMEHYLDLYLHSYGSILP--KDTVGYGKTHDLLTEEQRKEYVMGP 227 GK L+HCNYC +DI+ IRIKCA CPD+DLC++CF G E+ HK++HPYRV+DN ++P+ PDW A +E+L+L +E +GMGNW +VAE + +K+K +AC+EHY ++YL+S LP VG K L + + E GP Sbjct: 43 GKRALYHCNYCNKDITGKIRIKCA---MCPDFDLCIECFSVGAEVQPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGIEMYGMGNWAEVAEHVGTKNK--EACIEHYQNVYLNSPFFPLPDLSHVVGKNKKELLAMAKGQGEDKKGP 187
BLAST of NO07G04550 vs. NCBI_GenBank
Match: EEF52494.1 (transcriptional adaptor, putative [Ricinus communis]) HSP 1 Score: 154.8 bits (390), Expect = 4.100e-34 Identity = 70/149 (46.98%), Postives = 97/149 (65.10%), Query Frame = 0 Query: 66 GSLQFRSDMLLVGGKPGLFHCNYCMRDISNTIRIKCAETSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTAYPIFAPDWTATEELLMLSALEAHGMGNWGKVAEVLNSKDKTEKACMEHYLDLYLHSYGSILPKDTVGYGKTHDLL 215 GS Q S GK L+HCNYC +DIS IRIKCA CPD+DLCV+CF G E+ HK+ HPYRV+DN ++P+ PDW A EE+L+L +E +G GNW +VAE + +K K++ C++HY +Y++S LP + GK+ + L Sbjct: 29 GSAQTTSSPETSEGKAALYHCNYCKKDISGFIRIKCA---VCPDFDLCVECFSVGAEVTPHKSSHPYRVMDNLSFPLICPDWNADEEILLLEGIEMYGFGNWAEVAEHVGTKSKSK--CIDHYNAIYMNSPCFPLPDMSHVMGKSREEL 172
BLAST of NO07G04550 vs. NCBI_GenBank
Match: XP_004486336.1 (PREDICTED: transcriptional adapter ADA2b isoform X1 [Cicer arietinum]) HSP 1 Score: 154.5 bits (389), Expect = 5.300e-34 Identity = 71/158 (44.94%), Postives = 102/158 (64.56%), Query Frame = 0 Query: 79 GKPGLFHCNYCMRDISNTIRIKCAETSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTAYPIFAPDWTATEELLMLSALEAHGMGNWGKVAEVLNSKDKTEKACMEHYLDLYLHSYGSILPKDTVGYGKTHDLLTE------EQRKEYVMGPLDME 231 GK L+HCNYC +DI+ IRIKCA CPD+DLC++CF G E+ HK++HPYRV+DN ++P+ PDW A +E+L+L +E +GMGNW +VAE + +K+K +AC+EHY ++YL S LP + GK L + +K MG L ++ Sbjct: 43 GKRALYHCNYCNKDITGKIRIKCA---VCPDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGIEMYGMGNWAEVAEHVGTKNK--EACIEHYRNVYLSSPYFPLPDMSHVVGKNRKELLAMAKGQGDDKKGVSMGDLSLK 195
BLAST of NO07G04550 vs. NCBI_GenBank
Match: XP_004486337.1 (PREDICTED: transcriptional adapter ADA2b isoform X2 [Cicer arietinum]) HSP 1 Score: 154.5 bits (389), Expect = 5.300e-34 Identity = 71/158 (44.94%), Postives = 102/158 (64.56%), Query Frame = 0 Query: 79 GKPGLFHCNYCMRDISNTIRIKCAETSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTAYPIFAPDWTATEELLMLSALEAHGMGNWGKVAEVLNSKDKTEKACMEHYLDLYLHSYGSILPKDTVGYGKTHDLLTE------EQRKEYVMGPLDME 231 GK L+HCNYC +DI+ IRIKCA CPD+DLC++CF G E+ HK++HPYRV+DN ++P+ PDW A +E+L+L +E +GMGNW +VAE + +K+K +AC+EHY ++YL S LP + GK L + +K MG L ++ Sbjct: 43 GKRALYHCNYCNKDITGKIRIKCA---VCPDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPLICPDWNADDEILLLEGIEMYGMGNWAEVAEHVGTKNK--EACIEHYRNVYLSSPYFPLPDMSHVVGKNRKELLAMAKGQGDDKKGVSMGDLSLK 195
BLAST of NO07G04550 vs. NCBI_GenBank
Match: OMO76954.1 (Zinc finger, ZZ-type [Corchorus capsularis]) HSP 1 Score: 154.1 bits (388), Expect = 7.000e-34 Identity = 72/178 (40.45%), Postives = 110/178 (61.80%), Query Frame = 0 Query: 79 GKPGLFHCNYCMRDISNTIRIKCAETSTCPDWDLCVDCFGAGVELGKHKNDHPYRVVDNTAYPIFAPDWTATEELLMLSALEAHGMGNWGKVAEVLNSKDKTEKACMEHYLDLYLHSYGSILP----------KDTVGYGKTHDLLTEEQRKEYVMGPLDMET----YPEALHLKGAP 243 GK LFHCNYC +D++ IRIKCA CPD+DLC++CF G E+ HK++HPYRV+DN ++P+ PDW A +E+L+L +E +G+GNW +VAE + +K K E C+EHY ++Y+ S LP K+ + K H+ E+++ ++G L M+ P + ++G P Sbjct: 133 GKKALFHCNYCNKDLTGKIRIKCA---MCPDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPLICPDWNADDEMLLLEGIEMYGLGNWAEVAEHVGTKSKEE--CIEHYENVYMKSPVFPLPDMSHVVGKNKKELLAMAKGHN---EDKKGSSMLGELTMKEESPFSPSRVKVEGGP 302 The following BLAST results are available for this feature:
BLAST of NO07G04550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G04550 ID=NO07G04550|Name=NO07G04550|organism=Nannochloropsis oceanica|type=gene|length=2085bpback to top protein sequence of NO07G04550.1 >NO07G04550.1-protein ID=NO07G04550.1-protein|Name=NO07G04550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=298bpback to top Synonyms
Publications
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