NO07G04380, NO07G04380 (gene) Nannochloropsis oceanica

Overview
NameNO07G04380
Unique NameNO07G04380
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length758
Alignment locationchr7:1220001..1220758 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1220001..1220758 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
[Close]
BLAST of NO07G04380 vs. NCBI_GenBank
Match: EWM20057.1 (hypothetical protein Naga_102002g2 [Nannochloropsis gaditana])

HSP 1 Score: 275.4 bits (703), Expect = 1.300e-70
Identity = 149/185 (80.54%), Postives = 154/185 (83.24%), Query Frame = 0 
Query:    1 MLASLLAAIINHDHQGDNMLRRFTAKAGAMVRRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIRHIESKAAXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            MLA LLAAIINHDHQGD MLRRFTAKAGAM RRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ    TEI++++SKAA                      MSEVFWKAEVERFKREVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSKAA-----------AEIARVEDKRAMSEVFWKAEVERFKREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 174
[Close]
BLAST of NO07G04380 vs. NCBI_GenBank
Match: EWM20009.1 (hypothetical protein Naga_102330g1 [Nannochloropsis gaditana])

HSP 1 Score: 271.2 bits (692), Expect = 2.400e-69
Identity = 169/199 (84.92%), Postives = 174/199 (87.44%), Query Frame = 0 
Query:    1 MLASLLAAIINHDHQGDNMLRRFTAKAGAMVRRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIRHIESKAA--------------XXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            MLA LLAAIINHDHQGD MLRRFTAKAGAM RRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQ    TEI++++S+AA              XXXXXX  XXXXXXXXXXXXXXMSEVFWKAEVER KREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYVQSRAAAEIXXXXXXXXXXXXXXXXXEDXXXXXXXXXXXXXXMSEVFWKAEVERIKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 199
[Close]
BLAST of NO07G04380 vs. NCBI_GenBank
Match: EWM20145.1 (hypothetical protein Naga_101508g3 [Nannochloropsis gaditana])

HSP 1 Score: 259.2 bits (661), Expect = 9.400e-66
Identity = 161/177 (90.96%), Postives = 164/177 (92.66%), Query Frame = 0 
Query:   12 HDHQGDNMLRRFTAKAGAMVRRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIRHIESKAA-------XXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            H   GDNMLRRFTAKAGAM RRGSTLPGPGKGRVLRGGF STAHTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEI++IESKAA       XXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAAL+DKRKKRGGTGGLEEKEEEN
Sbjct:   30 HQPVGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEIKYIESKAAAEIAQXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALMDKRKKRGGTGGLEEKEEEN 206
[Close]
BLAST of NO07G04380 vs. NCBI_GenBank
Match: EWM20066.1 (hypothetical protein Naga_101980g1 [Nannochloropsis gaditana])

HSP 1 Score: 253.4 bits (646), Expect = 5.200e-64
Identity = 160/188 (85.11%), Postives = 166/188 (88.30%), Query Frame = 0 
Query:    1 MLASLLAAIINHDHQGDNMLRRFTAKAGAMVRRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIRHIESKAA-------XXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            +LA LLAAIINHDHQGD MLRRFTAKAGAM RRGSTLPGPGKGRVLRGGFSSTAHTGPGTS+GEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEI++++SKAA       XXXXXXXXXXXXXXXXXXXXXX            FKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN
Sbjct:   82 LLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSNGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 269
[Close]
BLAST of NO07G04380 vs. NCBI_GenBank
Match: EWM19993.1 (hypothetical protein Naga_102410g1 [Nannochloropsis gaditana])

HSP 1 Score: 247.7 bits (631), Expect = 2.800e-62
Identity = 158/188 (84.04%), Postives = 163/188 (86.70%), Query Frame = 0 
Query:    1 MLASLLAAIINHDHQGDNMLRRFTAKAGAMVRRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIRHIESKAA-------XXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            MLA LLAAIINHDHQGDNMLRRFTAKAGAM RRGSTLPGPGKGRVLRG FSSTAHTGPGTS+GEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQTEI++++SKAA       XXXXXXXXXXXXXXXXXXXXXX            FKREVQLAYTQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:    1 MLALLLAAIINHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGPFSSTAHTGPGTSNGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKREVQLAYTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 188
[Close]
BLAST of NO07G04380 vs. NCBI_GenBank
Match: EWM20119.1 (hypothetical protein Naga_101718g2 [Nannochloropsis gaditana])

HSP 1 Score: 242.7 bits (618), Expect = 9.100e-61
Identity = 161/214 (75.23%), Postives = 164/214 (76.64%), Query Frame = 0 
Query:   11 NHDHQGDNMLRRFTAKAGAMVRRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIRHIESKAA---------------------------------------XXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            NHDHQGD MLRRFTAKAGAM RRGSTLPGPGKGRVLRGGF STAHTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQ    TEI++IESKAA                                       XXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLA+TQDYEPYQAALVDKRKKRGG  G EEKEEEN
Sbjct:   74 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYIESKAAAEIXXXXXXXXXXXXXXXXXEDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAFTQDYEPYQAALVDKRKKRGGISGSEEKEEEN 287
[Close]
BLAST of NO07G04380 vs. NCBI_GenBank
Match: EWM20060.1 (hypothetical protein Naga_101993g1 [Nannochloropsis gaditana])

HSP 1 Score: 239.6 bits (610), Expect = 7.700e-60
Identity = 155/193 (80.31%), Postives = 159/193 (82.38%), Query Frame = 0 
Query:   11 NHDHQGDNMLRRFTAKAGAMVRRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQ----TEIRHI------------------ESKAAXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            NHDHQGDNMLRRFTAKAGAM RRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWAT FQGIGAVLGVAGATAVVVRTFDQ    TEI++I                       XXXXXXXXXXXXXXXXXXXXXX  E+FWKAEVERFKREVQLA+TQDYEPYQAALVDKRK RGGT G EEKEEEN
Sbjct:   71 NHDHQGDNMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEMATEIKYIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMFWKAEVERFKREVQLAFTQDYEPYQAALVDKRKTRGGTSGSEEKEEEN 263
[Close]
BLAST of NO07G04380 vs. NCBI_GenBank
Match: EWM20114.1 (hypothetical protein Naga_101734g1 [Nannochloropsis gaditana])

HSP 1 Score: 236.5 bits (602), Expect = 6.500e-59
Identity = 129/171 (75.44%), Postives = 131/171 (76.61%), Query Frame = 0 
Query:   11 NHDHQGDNMLRRFTAKAGAMVRRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIRHIESKAAXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            NHDHQGD MLRRFTAKAGAM RRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTE                               M+     AEVERFKREVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:   75 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTE-------------------------------MAPEIKYAEVERFKREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 214
[Close]
BLAST of NO07G04380 vs. NCBI_GenBank
Match: EWM20041.1 (hypothetical protein Naga_102106g1 [Nannochloropsis gaditana])

HSP 1 Score: 232.3 bits (591), Expect = 1.200e-57
Identity = 154/206 (74.76%), Postives = 160/206 (77.67%), Query Frame = 0 
Query:    1 MLASLLAAIINHDHQGDNMLRRFTAKAGAMVRRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIRHIESKA-------------------------AXXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            MLA LLAAIINHDHQGD MLRRFTAKAGAM RRGSTLPGPGKGRVLRGGF STAHTGPGTSSGEELGKKWATIFQGIGAV+GVAGATAVVVRTFDQTEI++++SKA                          XXXXXXXXXXXXXXXXXXXXXX              REVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:    1 MLALLLAAIINHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATIFQGIGAVVGVAGATAVVVRTFDQTEIKYVQSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 206
[Close]
BLAST of NO07G04380 vs. NCBI_GenBank
Match: EWM20054.1 (hypothetical protein Naga_102018g1 [Nannochloropsis gaditana])

HSP 1 Score: 224.6 bits (571), Expect = 2.600e-55
Identity = 148/196 (75.51%), Postives = 153/196 (78.06%), Query Frame = 0 
Query:   11 NHDHQGDNMLRRFTAKAGAMVRRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIRHIESKAA-------------------------XXXXXXXXXXXXXXXXXXXXXXMSEVFWKAEVERFKREVQLAYTQDYEPYQAALVDKRKKRGGTGGLEEKEEEN 182
            NHDHQGD MLRRFTAKAGAM RRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEI++++SKAA                         XXXXXXXXXXXXXXXXXXXXXX              REVQLA+TQDYEPYQAALVDKRKKRGGT G EEKEEEN
Sbjct:   72 NHDHQGDKMLRRFTAKAGAMARRGSTLPGPGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREVQLAFTQDYEPYQAALVDKRKKRGGTSGSEEKEEEN 267
The following BLAST results are available for this feature:
BLAST of NO07G04380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20057.11.300e-7080.54hypothetical protein Naga_102002g2 [Nannochloropsi... [more]
EWM20009.12.400e-6984.92hypothetical protein Naga_102330g1 [Nannochloropsi... [more]
EWM20145.19.400e-6690.96hypothetical protein Naga_101508g3 [Nannochloropsi... [more]
EWM20066.15.200e-6485.11hypothetical protein Naga_101980g1 [Nannochloropsi... [more]
EWM19993.12.800e-6284.04hypothetical protein Naga_102410g1 [Nannochloropsi... [more]
EWM20119.19.100e-6175.23hypothetical protein Naga_101718g2 [Nannochloropsi... [more]
EWM20060.17.700e-6080.31hypothetical protein Naga_101993g1 [Nannochloropsi... [more]
EWM20114.16.500e-5975.44hypothetical protein Naga_101734g1 [Nannochloropsi... [more]
EWM20041.11.200e-5774.76hypothetical protein Naga_102106g1 [Nannochloropsi... [more]
EWM20054.12.600e-5575.51hypothetical protein Naga_102018g1 [Nannochloropsi... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G04380.1NO07G04380.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G04380.1NO07G04380.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G04380 ID=NO07G04380|Name=NO07G04380|organism=Nannochloropsis oceanica|type=gene|length=758bp
ATGCTTGCCTCGCTGCTTGCTGCCATCATCAACCACGACCACCAGGGGGA
CAACATGCTTCGGCGCTTCACGGCGAAGGCTGGGGCCATGGTACGGAGAG
GGAGCACGCTTCCCGGGCCAGgtgaggtggcgtgtgtgatgcatttagga
agaactcgggcttgttgatggggtgggaatgcgcgttcagtgcacgcgac
cgcagtctggccgaggcatgttgatcccccctttgtctgcgtgtctgtgt
cgtttgcgttgcaatctttgttatgcggacaagggcccgcgtcaaggtgt
tcacgcacacgcacatccatacacacccaacagGAAAGGGACGCGTGCTG
CGGGGGGGCTTCTCCTCGACAGCCCACACGGGGCCGGGCACGAGCAGTGG
AGAGGAGCTCGGTAAGAAGTGGGCGACAATCTTCCAGGGCATTGGCGCGG
TGCTAGGGGTTGCTGGTGCTACCGCTGTGGTCGTGCGTACTTTCGACCAG
ACTGAGATCAGGCACATCGAGAGCAAGGCGGCGGCGGAGATCGCGCGTGT
GGAGGACAAGGCGGCGGCGGAGATCGTGCGTGTGGAGGACAAGCGGACAA
TGTCGGAAGTGTTTTGGAAGGCGGAGGTGGAGCGGTTCAAGCGCGAGGTC
CAACTAGCTTACACTCAAGACTATGAGCCTTATCAGGCCGCGCTTGTGGA
CAAACGTAAAAAGAGGGGAGGAACCGGCGGATTGGAGGAGAAGGAAGAGG
AGAATTAG
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protein sequence of NO07G04380.1

>NO07G04380.1-protein ID=NO07G04380.1-protein|Name=NO07G04380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=182bp
MLASLLAAIINHDHQGDNMLRRFTAKAGAMVRRGSTLPGPGKGRVLRGGF
SSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIR
HIESKAAAEIARVEDKAAAEIVRVEDKRTMSEVFWKAEVERFKREVQLAY
TQDYEPYQAALVDKRKKRGGTGGLEEKEEEN*
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Synonyms
Publications